Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19]
6,266 sequences; 272,660,569 total letters
Query= NC_002520.1
Length=232392
Score E
Sequences producing significant alignments: (Bits) Value
seq307 131 2e-25
seq459 125 1e-23
seq467 105 1e-17
seq321 93.3 6e-14
>seq307
Length=2169461
Score = 131 bits (144), Expect = 2e-25
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108
|||| |||| |||||| | || | || | || |||||||| |||||||||||||
Sbjct 1514753 TTCCTCCTCGAAGTCTCAGCACAAGGTGAAGTGTTGATTCTTTTTGAATATTATAATCTG 1514694
Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168
|||| || || | ||| || | || ||||||||||| || |||| ||||||||| ||||
Sbjct 1514693 AAAGTGTCCTTCCATCTTCCAGCTGCTTTCCAGCAAAGATTAATCGTTGCTGATCAGGAG 1514634
Query 146169 GAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTA 146228
||||||||||||||||||| ||||||||| ||| |
Sbjct 1514633 GAATTCCTTCTTTATCTTGGATCTTAGCTTTGACATTCTCTATCGTATCTGAAGCTTCGA 1514574
Query 146229 CTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATT 146278
|||| || ||||| ||||| ||||| | ||| || | || |||||||||
Sbjct 1514573 CTTCCAGGGTGATGGTTTTCCCTGTGAGTGTCTTGACAAAGATTTGCATT 1514524
Score = 116 bits (128), Expect = 6e-21
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108
|||| |||| |||||||| |||| ||| | || |||||||| || ||||||||||
Sbjct 1515672 TTCCTCCTCGAAGTCTTAGAACCAGATGAAGGGTGGATTCTTTTTGAATGTTATAATCTG 1515613
Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168
| || || || | ||| || | || ||||| ||||| || |||| |||||| || ||||
Sbjct 1515612 ACAGTGTCCTCCCATCTTCGAGCTGCTTTCCTGCAAAGATTAATCGTTGCTGGTCTGGAG 1515553
Query 146169 GAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTA 146228
||||||||||||| ||||| || ||||| ||| |
Sbjct 1515552 GAATTCCTTCTTTGTCTTGGATCTTAGCTTTGACATTCTCTATTGTGTCTGAGGCTTCCA 1515493
Query 146229 CTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATT 146278
||||||| ||||| ||||| ||||| | || || | ||| |||||||||
Sbjct 1515492 CTTCTAGGGTGATAGTTTTCCCTGTGAGAGTCTTCACGAAGATTTGCATT 1515443
Score = 113 bits (124), Expect = 7e-20
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108
|||| |||| |||||||| |||| ||| | || |||||||| || ||||||||||
Sbjct 1510775 TTCCTCCTCGAAGTCTTAGAACCAGATGAAGTGTGGATTCTTTTTGAATGTTATAATCTG 1510716
Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168
| || || || | ||| || | || || || ||||| || |||| |||||| || ||||
Sbjct 1510715 ACAGTGTCCTTCCATCTTCGAGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGAG 1510656
Query 146169 GAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTA 146228
||||||||||||| ||||| || ||||| ||| |
Sbjct 1510655 GAATTCCTTCTTTGTCTTGGATCTTAGCTTTGACATTCTCTATTGTGTCTGAGGCTTCCA 1510596
Query 146229 CTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATT 146278
||||||| ||||| ||||| ||||| | || || | ||| |||||||||
Sbjct 1510595 CTTCTAGGGTGATAGTTTTCCCTGTGAGAGTCTTCACGAAGATTTGCATT 1510546
Score = 98.7 bits (108), Expect = 1e-15
Identities = 155/230 (67%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108
|||| |||| |||||||| |||| ||| | || |||||||| || ||||||||||
Sbjct 1510091 TTCCTCCTCGAAGTCTTAGAACCAGATGAAGTGTGGATTCTTTTTGAATGTTATAATCTG 1510032
Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168
| || || || | ||| || | || || || ||||| || |||| |||||| || ||||
Sbjct 1510031 ACAGTGTCCTTCCATCTTCGAGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGAG 1509972
Query 146169 GAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTA 146228
| ||||| ||||| || || || || ||| ||| |
Sbjct 1509971 GGATTCCCTCTTTGTCCTGGATCTTCGCCTTTACATTTTCAATTGTGTCAGAAGCTTCGA 1509912
Query 146229 CTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATT 146278
|||| || ||||| ||||| ||||| | ||| || | ||| |||||||||
Sbjct 1509911 CTTCCAGAGTGATGGTTTTCCCTGTGAGTGTCTTCACGAAGATTTGCATT 1509862
Score = 95.1 bits (104), Expect = 2e-14
Identities = 154/230 (67%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108
|||| |||| |||||||| |||| ||| | || |||||||| || ||||||||||
Sbjct 1510319 TTCCTCCTCGAAGTCTTAGAACCAGATGAAGTGTGGATTCTTTTTGAATGTTATAATCTG 1510260
Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168
| || || || | ||| || | || || || ||||| || |||| |||||| || ||||
Sbjct 1510259 ACAGTGTCCTTCCATCTTCGAGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGAG 1510200
Query 146169 GAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTA 146228
| ||||| ||||| || || || || ||| ||| |
Sbjct 1510199 GGATTCCCTCTTTGTCCTGGATCTTCGCCTTTACATTTTCAATTGTGTCAGAAGCTTCGA 1510140
Query 146229 CTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATT 146278
|||| || ||||| ||||| ||||| | || || | ||| |||||||||
Sbjct 1510139 CTTCCAGGGTGATGGTTTTTCCTGTGAGAGTCTTGACGAAGATTTGCATT 1510090
Score = 95.1 bits (104), Expect = 2e-14
Identities = 154/230 (67%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108
|||| |||| |||||||| |||| ||| | || |||||||| || ||||||||||
Sbjct 1510547 TTCCTCCTCGAAGTCTTAGAACCAGATGAAGTGTGGATTCTTTTTGAATGTTATAATCTG 1510488
Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168
| || || || | ||| || | || || || ||||| || |||| |||||| || ||||
Sbjct 1510487 ACAGTGTCCTTCCATCTTCGAGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGAG 1510428
Query 146169 GAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTA 146228
| ||||| ||||| || || || || ||| ||| |
Sbjct 1510427 GGATTCCCTCTTTGTCCTGGATCTTCGCCTTTACATTTTCAATTGTGTCAGAAGCTTCGA 1510368
Query 146229 CTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATT 146278
|||| || ||||| ||||| ||||| | || || | ||| |||||||||
Sbjct 1510367 CTTCCAGGGTGATGGTTTTTCCTGTGAGAGTCTTGACGAAGATTTGCATT 1510318
Score = 95.1 bits (104), Expect = 2e-14
Identities = 154/230 (67%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108
|||| |||| |||||||| |||| ||| | || |||||||| || ||||||||||
Sbjct 1514981 TTCCTCCTCGAAGTCTTAGAACCAGATGAAGTGTGGATTCTTTTTGAATGTTATAATCTG 1514922
Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168
| || || || | ||| || | || || || ||||| || |||| |||||| || ||||
Sbjct 1514921 ACAGTGTCCTTCCATCTTCGAGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGAG 1514862
Query 146169 GAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTA 146228
| ||||| ||||| || || || || ||| ||| |
Sbjct 1514861 GGATTCCCTCTTTGTCCTGGATCTTCGCCTTTACATTTTCAATTGTGTCAGAAGCTTCGA 1514802
Query 146229 CTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATT 146278
|||| || ||||| ||||| ||||| | || || | ||| |||||||||
Sbjct 1514801 CTTCCAGGGTGATGGTTTTTCCTGTGAGAGTCTTGACGAAGATTTGCATT 1514752
Score = 93.3 bits (102), Expect = 6e-14
Identities = 104/139 (75%), Gaps = 0/139 (0%)
Strand=Plus/Minus
Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108
|||| |||| |||||||| |||| ||| | || |||||||| || ||||||||||
Sbjct 1509863 TTCCTCCTCGAAGTCTTAGAACCAGATGAAGTGTGGATTCTTTTTGAATGTTATAATCTG 1509804
Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168
| || || || | ||| || | || || || ||||| || |||| |||||| || ||||
Sbjct 1509803 ACAGTGTCCTTCCATCTTCGAGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGAG 1509744
Query 146169 GAATTCCTTCTTTATCTTG 146187
| ||||| ||||| || ||
Sbjct 1509743 GGATTCCCTCTTTGTCCTG 1509725
>seq459
Length=558815
Score = 125 bits (138), Expect = 1e-23
Identities = 106/128 (83%), Gaps = 2/128 (2%)
Strand=Plus/Plus
Query 146050 TCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTG 146108
||||||||| | | ||| || ||||| || |||||||| ||| || |||||||||||||
Sbjct 439376 TCCACCTCTTAAACGTAAGACTAAATGCAATGTAGATTCCTTTTGA-ATATTATAATCTG 439434
Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168
| |||||||| | ||| || ||||| |||||||||||||| |||||||| || || || |
Sbjct 439435 ACAGAGTTCTACCATCTTCCAATTGCTTTCCAGCAAAAATTAATCTTTGTTGGTCAGGTG 439494
Query 146169 GAATTCCT 146176
||||||||
Sbjct 439495 GAATTCCT 439502
>seq467
Length=2555529
Score = 105 bits (116), Expect = 1e-17
Identities = 106/138 (77%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 146050 TCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGA 146109
||| || || |||| | ||| ||||| | |||||||||||| ||||| ||||| ||
Sbjct 1364158 TCCTCCCCTGAGTCGAAGTACTAAATGGAGAGTAGATTCTTTCTGAATATTGTAATCAGA 1364217
Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169
||| || | | ||| || | |||||| ||||| || || ||||| |||||||| || ||
Sbjct 1364218 AAGTGTACGACCATCTTCCAGTTGTTTACCAGCGAAGATTAATCTCTGCTGATCTGGTGG 1364277
Query 146170 AATTCCTTCTTTATCTTG 146187
||| |||||||| |||||
Sbjct 1364278 AATGCCTTCTTTGTCTTG 1364295
Score = 98.7 bits (108), Expect = 1e-15
Identities = 155/230 (67%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108
||||||| | || | | ||| | ||| | || |||||||| ||||| ||||| |
Sbjct 1365886 TTCCACCACGGAGACGGAGTACAAGATGAAGGGTTGATTCTTTTTGAATATTGTAATCGG 1365945
Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168
| | || | | ||| ||||||||||| |||||||| ||||||||||| ||||| ||||
Sbjct 1365946 ATAACGTGCGTCCATCTTCTAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGAG 1366005
Query 146169 GAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTA 146228
|||| |||||||| || || |||||||| ||| |
Sbjct 1366006 GAATACCTTCTTTGTCCTGAATTTTGGCTTTAACATTTTCAATTGTATCTGATGCTTCCA 1366065
Query 146229 CTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATT 146278
|||| || ||||| || || || || ||||| || | ||| || ||||||
Sbjct 1366066 CTTCGAGAGTGATGGTCTTTCCAGTCAATGTCTTTACGAAGATCTGCATT 1366115
Score = 95.1 bits (104), Expect = 2e-14
Identities = 93/120 (78%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 146068 TACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATC 146127
||| | ||| | || |||||||| ||||| ||||| || | || | | ||| ||
Sbjct 1364632 TACAAGATGAAGGGTTGATTCTTTTTGAATATTGTAATCGGATAACGTGCGTCCATCTTC 1364691
Query 146128 TAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187
||||||||| |||||||| ||||||||||| ||||| |||||||| |||||||| || ||
Sbjct 1364692 TAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGAGGAATACCTTCTTTGTCCTG 1364751
Score = 93.3 bits (102), Expect = 6e-14
Identities = 89/114 (78%), Gaps = 0/114 (0%)
Strand=Plus/Plus
Query 146068 TACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATC 146127
||| | ||| | || |||||||| ||||| ||||| || | || | | ||| ||
Sbjct 1364979 TACAAGATGAAGGGTTGATTCTTTTTGAATATTGTAATCGGATAACGTGCGTCCATCTTC 1365038
Query 146128 TAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTT 146181
||||||||| |||||||| ||||||||||| ||||| |||||||| ||||||||
Sbjct 1365039 TAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGAGGAATACCTTCTTT 1365092
Score = 89.7 bits (98), Expect = 8e-13
Identities = 84/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 146081 GTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATCTAATTGTTTTCCA 146140
|||||||| || |||||| || || ||||| || | | ||| ||||||||||| |||
Sbjct 1366374 GTAGATTCCTTTTGTATATTGTAGTCAGAAAGTGTGCGTCCATCTTCTAATTGTTTACCA 1366433
Query 146141 GCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187
|| || |||||||| |||||||| || || || || |||||||| ||
Sbjct 1366434 GCGAAGATCAATCTCTGCTGATCTGGTGGGATGCCCTCTTTATCCTG 1366480
>seq321
Length=1097274
Score = 93.3 bits (102), Expect = 6e-14
Identities = 125/182 (69%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 146096 ATATTATAATCTGAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTT 146155
||||||||||| || || || | | ||| ||||||||||||||||| ||||| | |
Sbjct 785279 ATATTATAATCAGAGAGGGTACGTCCATCTTCTAATTGTTTTCCAGCGAAAATTAGACGC 785338
Query 146156 TGCTGATCCGGAGGAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTA 146215
|| ||||| || |||||||||||||||||||| |||
Sbjct 785339 TGTTGATCAGGTGGAATTCCTTCTTTATCTTGAATTTTAGCTTTTACATTTTCGATGGTA 785398
Query 146216 TCTGAACTTTCTACTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGC 146275
|| || |||||| || || ||||| ||||| || || || ||||| | |||||| |||
Sbjct 785399 TCAGACGCTTCTACCTCGAGCGTGATAGTTTTGCCCGTCAAAGTTTTCACGAATATCTGC 785458
Query 146276 AT 146277
||
Sbjct 785459 AT 785460
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 743468163294720
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