Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19]
6,266 sequences; 272,660,569 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq467 95.1 1e-14
>seq467
Length=2555529
Score = 95.1 bits (104), Expect = 1e-14
Identities = 136/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204
||| ||||||||||| ||||| | | ||| | || |||| |||||| || || ||
Sbjct 1365239 CTCTTTCTGAATGTTATAGTCAGATAATGTGCGTCCATCTTCCAATTGTTTGCCAGCAAA 1365298
Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264
||||||| ||||||||| ||||| | ||| || |||||| |||||| ||| ||
Sbjct 1365299 AATCAACCTCTGTTGGTCTGGAGGAATACCTTCTTTGTCCTGAATTTTAGCCTTTACATT 1365358
Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324
| | | | |||| |||| || |||| ||| || || || || || || || |||||
Sbjct 1365359 CTCAATGGTGTCAGATGCCTCAACTTCCAAGGTTATAGTTTTTCCAGTAAGGGTTTTCAC 1365418
Query 45325 AAAGATTTGCAT 45336
|| || |||||
Sbjct 1365419 GAATATCTGCAT 1365430
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395045029341586
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |