Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19]
6,266 sequences; 272,660,569 total letters
Query= NC_003038.1
Length=212482
Score E
Sequences producing significant alignments: (Bits) Value
seq202 100 4e-16
>seq202
Length=497029
Score = 100 bits (110), Expect = 4e-16
Identities = 150/215 (70%), Gaps = 15/215 (7%)
Strand=Plus/Plus
Query 104530 GATAGAAGAATGATATTATTAGCTTGGAACCCAAAGGATAATTCTAAAATGGCACTTCCT 104589
||||| ||||| ||| | | ||| ||||||||| |||| | |||||||| | |||
Sbjct 1249 GATAGGAGAATAATAATGTCAGCATGGAACCCAGTTGATATACCAAAAATGGCTTTACCT 1308
Query 104590 CCTTGTCATTGTATAGCACATTTTGATGTAAGTTCAAAAATAAATGGTAAAAGAGAATTG 104649
|| ||||||||| | | ||| ||| |||||||| ||||| ||||||
Sbjct 1309 CCATGTCATTGTTTTGTACAGTTTTATGTAAGT---------AATGG------AGAATTA 1353
Query 104650 TCTTGTCATTTATTTCAAAGATCTGCAGATATGGGGTTGGGAGTTCCTTTTAACATAGCA 104709
|| || || || | ||||||| || || ||||| | ||||| || ||||||||||||
Sbjct 1354 TCGTGCCAGTTGTATCAAAGAAGCGCCGACATGGGTCTTGGAGTACCATTTAACATAGCA 1413
Query 104710 AGTTATGCATTATTAACACATATAATAGCTCATGT 104744
||| || | ||||| | || ||||||| ||
Sbjct 1414 TCGTATTCACTGTTAACTTACATGTTAGCTCACGT 1448
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 679761153537120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |