Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19]
6,266 sequences; 272,660,569 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq467 114 1e-20
seq307 107 1e-18
>seq467
Length=2555529
Score = 114 bits (126), Expect = 1e-20
Identities = 165/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157
||| || || || | || || | |||||| || ||||| |||||||| |||||||| |
Sbjct 1366115 TCCACCACGGAGACGGAGCACAAGGTGAAGAGTAGATTCCTTTTGAATATTGTAGTCAGA 1366174
Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217
| ||| | |||||||||||||||||| || |||| ||||||||||| || ||
Sbjct 1366175 TAATGTGCGTCCATCTTCCAATTGTTTGCCAGCGAAGATCAGTCTTTGTTGGTCTGGAGG 1366234
Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGG 18276
| || || ||||| ||||| | || || || | | ||| |||||| || ||
Sbjct 1366235 AATACCCTCTTTATCCTGAATTT-TAGCTTTAACATTTTCAATAGTGTCTGAGGCTTCAA 1366293
Query 18277 TTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326
||||| |||||| | || || |||||||| ||||| || || ||||||
Sbjct 1366294 CTTCAAGAGTGATGGTCTTTCCAGTCAATGTCTTTACGAAGATCTGCATT 1366343
Score = 111 bits (122), Expect = 1e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157
|||||||| |||| |||||| | || || || |||||||| ||||| ||||| || |
Sbjct 1364158 TCCTCCCCTGAGTCGAAGTACTAAATGGAGAGTAGATTCTTTCTGAATATTGTAATCAGA 1364217
Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217
| ||| || |||||||| |||||| || || |||| | ||| || ||||| ||
Sbjct 1364218 AAGTGTACGACCATCTTCCAGTTGTTTACCAGCGAAGATTAATCTCTGCTGATCTGGTGG 1364277
Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277
| |||||| || || ||||| | ||| || | | ||| ||||||| | |||
Sbjct 1364278 AATGCCTTCTTTGTCTTGAATTTTTGCCTTCACGTTTTCAATAGTGTCAGACGCCTCAAC 1364337
Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326
||| | || ||| |||| || || | || || |||||||||||||||
Sbjct 1364338 TTCCAGAGTTATGGTTTTTCCAGTAAGAGTCTTCACAAAAATTTGCATT 1364386
Score = 96.9 bits (106), Expect = 3e-15
Identities = 161/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157
||| || || || | ||||| | ||||| ||||||||||||||||| ||||| ||||
Sbjct 1365887 TCCACCACGGAGACGGAGTACAAGATGAAGGGTTGATTCTTTTTGAATATTGTAATCGGA 1365946
Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217
| || | |||||| |||||||| || ||| |||| | |||||||||||| ||
Sbjct 1365947 TAACGTGCGTCCATCTTCTAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGAGG 1366006
Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGG 18276
| ||||| || || ||||| | || || || | | ||| || || | ||
Sbjct 1366007 AATACCTTCTTTGTCCTGAATTT-TGGCTTTAACATTTTCAATTGTATCTGATGCTTCCA 1366065
Query 18277 TTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326
||| | |||||| | || || |||||||| ||||| || || ||||||
Sbjct 1366066 CTTCGAGAGTGATGGTCTTTCCAGTCAATGTCTTTACGAAGATCTGCATT 1366115
Score = 91.5 bits (100), Expect = 1e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173
||||| | ||||| ||||||||||||||||| ||||| |||| | || | ||||
Sbjct 1364630 AGTACAAGATGAAGGGTTGATTCTTTTTGAATATTGTAATCGGATAACGTGCGTCCATCT 1364689
Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233
|| |||||||| || ||| |||| | |||||||||||| || | ||||| || ||
Sbjct 1364690 TCTAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGAGGAATACCTTCTTTGTCC 1364749
Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293
||||| ||| || | ||| |||||| | ||| ||| | ||| || ||
Sbjct 1364750 TGAATTTTAGCCTTTACATTCTCAATGGTGTCAGATGCCTCAACTTCCAAGGTTATAGTT 1364809
Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326
|| || || | ||||| || || || ||||||
Sbjct 1364810 TTTCCAGTAAGGGTTTTCACGAATATCTGCATT 1364842
Score = 82.4 bits (90), Expect = 6e-11
Identities = 77/98 (79%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173
||||| | ||||| ||||||||||||||||| ||||| |||| | || | ||||
Sbjct 1364977 AGTACAAGATGAAGGGTTGATTCTTTTTGAATATTGTAATCGGATAACGTGCGTCCATCT 1365036
Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATC 18211
|| |||||||| || ||| |||| | ||||||||||||
Sbjct 1365037 TCTAATTGTTTACCAGCAAAGATCAATCTTTGTTGATC 1365074
>seq307
Length=2169461
Score = 107 bits (118), Expect = 1e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157
|||||| || ||||| | |||| |||||||| |||||||||||||||||||| || |
Sbjct 1515443 TCCTCCTCGAAGTCTCAAAACCAGATGAAGTGTGGATTCTTTTTGAATGTTGTAATCAGA 1515384
Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217
| ||| | | |||||| | |||||| || ||| |||| | || ||| |||| |||
Sbjct 1515383 GAGTGTCCTTCCATCTTCAAGTTGTTTCCCAGCAAAGATTAATCGTTGCTGATGAGGGGG 1515324
Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277
| || || || || || | | ||| || | | ||| |||||| | |||
Sbjct 1515323 AATTCCCTCTTTGTCCTGGATCTTTGCCTTTACATTTTCAATTGTGTCAGAAGCTTCGAC 1515264
Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326
||| | |||||| |||| || || | ||| || ||||| |||||||||
Sbjct 1515263 TTCCAGAGTGATGGTTTTCCCTGTGAGTGTCTTGACAAAGATTTGCATT 1515215
Score = 96.9 bits (106), Expect = 3e-15
Identities = 161/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157
|||||| || ||||| || || | |||||||||||||||||||||||| || || || |
Sbjct 1514752 TCCTCCTCGAAGTCTCAGCACAAGGTGAAGTGTTGATTCTTTTTGAATATTATAATCTGA 1514693
Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217
| ||| | | |||||||| || || || ||| |||| | || ||| ||||| ||
Sbjct 1514692 AAGTGTCCTTCCATCTTCCAGCTGCTTTCCAGCAAAGATTAATCGTTGCTGATCAGGAGG 1514633
Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGG 18276
| ||||| ||||| || | | || ||||| | | | || || | |||
Sbjct 1514632 AATTCCTTCTTTATCTTGGATCT-TAGCTTTGACATTCTCTATCGTATCTGAAGCTTCGA 1514574
Query 18277 TTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326
||| | ||||||| |||| || || | ||| || ||||| |||||||||
Sbjct 1514573 CTTCCAGGGTGATGGTTTTCCCTGTGAGTGTCTTGACAAAGATTTGCATT 1514524
Score = 93.3 bits (102), Expect = 3e-14
Identities = 160/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157
||||||||| ||||| || |||| |||||||| |||||||||||||||||||| || |
Sbjct 1515899 TCCTCCCCGAAGTCTCAGAACCAGATGAAGTGTGGATTCTTTTTGAATGTTGTAATCAGA 1515840
Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217
| ||| | | |||||| | || || || ||| |||| | || ||| ||||| ||
Sbjct 1515839 GAGTGTCCTCCCATCTTCGAGCTGCTTTCCTGCAAAGATTAATCGTTGCTGATCTGGAGG 1515780
Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGG 18276
| || || || || || | | || ||||| | | | |||||| | |||
Sbjct 1515779 TATTCCCTCTTTGTCCTGGATCT-TAGCTTTGACATTCTCTATTGTGTCAGAAGCTTCGA 1515721
Query 18277 TTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326
||| | ||||||| |||| || || | || || || || |||||||||
Sbjct 1515720 CTTCCAGGGTGATGGTTTTTCCTGTGAGAGTCTTGACGAAGATTTGCATT 1515671
Score = 89.7 bits (98), Expect = 4e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157
|||||| || ||||| || |||| |||||||| ||||||||||||||||| || || |
Sbjct 1510090 TCCTCCTCGAAGTCTTAGAACCAGATGAAGTGTGGATTCTTTTTGAATGTTATAATCTGA 1510031
Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217
|| ||| | | |||||| | || || || ||| |||| | || ||| || || ||
Sbjct 1510030 CAGTGTCCTTCCATCTTCGAGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGAGG 1509971
Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277
| || || || || || | ||| || | | ||| |||||| | |||
Sbjct 1509970 GATTCCCTCTTTGTCCTGGATCTTCGCCTTTACATTTTCAATTGTGTCAGAAGCTTCGAC 1509911
Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326
||| | |||||| |||| || || | ||| || || || |||||||||
Sbjct 1509910 TTCCAGAGTGATGGTTTTCCCTGTGAGTGTCTTCACGAAGATTTGCATT 1509862
Score = 89.7 bits (98), Expect = 4e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157
|||||| || ||||| || |||| |||||||| ||||||||||||||||| || || |
Sbjct 1510318 TCCTCCTCGAAGTCTTAGAACCAGATGAAGTGTGGATTCTTTTTGAATGTTATAATCTGA 1510259
Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217
|| ||| | | |||||| | || || || ||| |||| | || ||| || || ||
Sbjct 1510258 CAGTGTCCTTCCATCTTCGAGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGAGG 1510199
Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277
| || || || || || | ||| || | | ||| |||||| | |||
Sbjct 1510198 GATTCCCTCTTTGTCCTGGATCTTCGCCTTTACATTTTCAATTGTGTCAGAAGCTTCGAC 1510139
Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326
||| | ||||||| |||| || || | || || || || |||||||||
Sbjct 1510138 TTCCAGGGTGATGGTTTTTCCTGTGAGAGTCTTGACGAAGATTTGCATT 1510090
Score = 89.7 bits (98), Expect = 4e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157
|||||| || ||||| || |||| |||||||| ||||||||||||||||| || || |
Sbjct 1510546 TCCTCCTCGAAGTCTTAGAACCAGATGAAGTGTGGATTCTTTTTGAATGTTATAATCTGA 1510487
Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217
|| ||| | | |||||| | || || || ||| |||| | || ||| || || ||
Sbjct 1510486 CAGTGTCCTTCCATCTTCGAGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGAGG 1510427
Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277
| || || || || || | ||| || | | ||| |||||| | |||
Sbjct 1510426 GATTCCCTCTTTGTCCTGGATCTTCGCCTTTACATTTTCAATTGTGTCAGAAGCTTCGAC 1510367
Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326
||| | ||||||| |||| || || | || || || || |||||||||
Sbjct 1510366 TTCCAGGGTGATGGTTTTTCCTGTGAGAGTCTTGACGAAGATTTGCATT 1510318
Score = 89.7 bits (98), Expect = 4e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157
|||||| || ||||| || |||| |||||||| ||||||||||||||||| || || |
Sbjct 1514980 TCCTCCTCGAAGTCTTAGAACCAGATGAAGTGTGGATTCTTTTTGAATGTTATAATCTGA 1514921
Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217
|| ||| | | |||||| | || || || ||| |||| | || ||| || || ||
Sbjct 1514920 CAGTGTCCTTCCATCTTCGAGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGAGG 1514861
Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277
| || || || || || | ||| || | | ||| |||||| | |||
Sbjct 1514860 GATTCCCTCTTTGTCCTGGATCTTCGCCTTTACATTTTCAATTGTGTCAGAAGCTTCGAC 1514801
Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326
||| | ||||||| |||| || || | || || || || |||||||||
Sbjct 1514800 TTCCAGGGTGATGGTTTTTCCTGTGAGAGTCTTGACGAAGATTTGCATT 1514752
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379315030684170
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