Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19] 6,266 sequences; 272,660,569 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq202 87.8 4e-12 >seq202 Length=497029 Score = 87.8 bits (96), Expect = 4e-12 Identities = 126/178 (71%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 35529 ATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTTCACCTTATGGCTCTTC 35588 ||||||| || || || ||| | |||||||| || | ||| | | |||||| | | Sbjct 1247 ATGATAGGAGAATAATAATGTCAGCATGGAACCCAGTTGATATACCAAAAATGGCTTTAC 1306 Query 35589 CTCCATGCCACATGACTGCTCAATTTTATGTGGCTAATGGAGAATTGTCGTGCCAGTTGT 35648 ||||||| || || || |||||||| |||||||||||| ||||||||||||| Sbjct 1307 CTCCATGTCATTGTTTTGTACAGTTTTATGTAAGTAATGGAGAATTATCGTGCCAGTTGT 1366 Query 35649 ATCAGCGAAGCGGAGATGTCGGGTTGGGCGTGCCCTTCAATATTGCATCATACTCTCT 35706 |||| |||||| || | || | || || || || || || ||||| || || || Sbjct 1367 ATCAAAGAAGCGCCGACATGGGTCTTGGAGTACCATTTAACATAGCATCGTATTCACT 1424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989504553104030