Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19]
6,266 sequences; 272,660,569 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq202 87.8 4e-12
>seq202
Length=497029
Score = 87.8 bits (96), Expect = 4e-12
Identities = 126/178 (71%), Gaps = 0/178 (0%)
Strand=Plus/Plus
Query 35529 ATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTTCACCTTATGGCTCTTC 35588
||||||| || || || ||| | |||||||| || | ||| | | |||||| | |
Sbjct 1247 ATGATAGGAGAATAATAATGTCAGCATGGAACCCAGTTGATATACCAAAAATGGCTTTAC 1306
Query 35589 CTCCATGCCACATGACTGCTCAATTTTATGTGGCTAATGGAGAATTGTCGTGCCAGTTGT 35648
||||||| || || || |||||||| |||||||||||| |||||||||||||
Sbjct 1307 CTCCATGTCATTGTTTTGTACAGTTTTATGTAAGTAATGGAGAATTATCGTGCCAGTTGT 1366
Query 35649 ATCAGCGAAGCGGAGATGTCGGGTTGGGCGTGCCCTTCAATATTGCATCATACTCTCT 35706
|||| |||||| || | || | || || || || || || ||||| || || ||
Sbjct 1367 ATCAAAGAAGCGCCGACATGGGTCTTGGAGTACCATTTAACATAGCATCGTATTCACT 1424
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989504553104030
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |