Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19] 6,266 sequences; 272,660,569 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq202 113 7e-20 >seq202 Length=497029 Score = 113 bits (124), Expect = 7e-20 Identities = 149/205 (73%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 70202 GATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGCACCAAATGGCACTACCA 70261 |||||||| || |||||| ||||||| || | ||| | | ||||||| |||| Sbjct 1249 GATAGGAGAATAATAATGTCAGCATGGAACCCAGTTGATATACCAAAAATGGCTTTACCT 1308 Query 70262 CCGTGTCACTGTTTGGCTCAGTTTTACTCGTACG--ATGGCAAATTGTCATGCTTAATGT 70319 || ||||| ||||| | |||||||| ||| | |||| |||| || ||| ||| Sbjct 1309 CCATGTCATTGTTTTGTACAGTTTTAT--GTAAGTAATGGAGAATTATCGTGCCAGTTGT 1366 Query 70320 ATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATTGCAAGCTATTCTATGT 70379 |||| || || ||||||||||| || || ||||| |||||||| ||| ||||| ||| Sbjct 1367 ATCAAAGAAGCGCCGACATGGGTCTTGGAGTACCATTTAACATAGCATCGTATTCACTGT 1426 Query 70380 TGACGCACATGATTGCTCACATTAC 70404 | || ||||| | |||||| |||| Sbjct 1427 TAACTTACATGTTAGCTCACGTTAC 1451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741001156538160