Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19]
6,266 sequences; 272,660,569 total letters
Query= NC_004690.1
Length=113220
Score E
Sequences producing significant alignments: (Bits) Value
seq307 120 2e-22
seq467 116 3e-21
seq321 107 1e-18
>seq307
Length=2169461
Score = 120 bits (132), Expect = 2e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|| |||| | ||| ||||| | |||||| ||||| |||||||| |||||||||||
Sbjct 1515442 CCTCCTCGAAGTCTCAAAACCAGATGAAGTGTGGATTCTTTTTGAATGTTGTAATCAGAG 1515383
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
|| | || | ||||| | |||||| ||||| | || || ||||| || | |||
Sbjct 1515382 AGTGTCCTTCCATCTTCAAGTTGTTTCCCAGCAAAGATTAATCGTTGCTGATGAGGGGGA 1515323
Query 15257 ATTCCTTCTTTGTCACAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315
||||| |||||||| || ||||| ||||||| |||| || || || | ||| ||
Sbjct 1515322 ATTCCCTCTTTGTCCTGGATCTTTGC-CTTTACATTTTCAATTGTGTCAGAAGCTTCGAC 1515264
Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
|| | || |||||||| ||||| || || || ||||| ||||||||
Sbjct 1515263 TTCCAGAGTGATGGTTTTCCCTGTGAGTGTCTTGACAAAGATTTGCAT 1515216
Score = 116 bits (128), Expect = 3e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|| |||| | ||||| ||| | |||||||||||| |||||||| ||||| |||||
Sbjct 1515670 CCTCCTCGAAGTCTTAGAACCAGATGAAGGGTGGATTCTTTTTGAATGTTATAATCTGAC 1515611
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
|| | ||| | ||||| | || || || || | || || ||||| ||||| |||
Sbjct 1515610 AGTGTCCTCCCATCTTCGAGCTGCTTTCCTGCAAAGATTAATCGTTGCTGGTCTGGAGGA 1515551
Query 15257 ATTCCTTCTTTGTCACAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315
|||||||||||||| || || ||| || ||| | ||||| || || ||| ||
Sbjct 1515550 ATTCCTTCTTTGTCTTGGATCTTAGCT-TTGACATTCTCTATTGTGTCTGAGGCTTCCAC 1515492
Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
|||| ||| || ||||| ||||| ||||| || || || ||||||||
Sbjct 1515491 TTCTAGGGTGATAGTTTTCCCTGTGAGAGTCTTCACGAAGATTTGCAT 1515444
Score = 113 bits (124), Expect = 3e-20
Identities = 167/237 (70%), Gaps = 0/237 (0%)
Strand=Plus/Minus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|| |||| | ||||| ||| | |||||| ||||| |||||||| ||||| |||||
Sbjct 1509861 CCTCCTCGAAGTCTTAGAACCAGATGAAGTGTGGATTCTTTTTGAATGTTATAATCTGAC 1509802
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
|| | || | ||||| | || || || || | || || ||||| ||||| ||
Sbjct 1509801 AGTGTCCTTCCATCTTCGAGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGAGGG 1509742
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
||||| |||||||| || || ||| ||| | ||||| ||||| | ||| ||
Sbjct 1509741 ATTCCCTCTTTGTCCTGGATCTTCGCCTTGACATTCTCTATCGTATCTGAAGCTTCGACT 1509682
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGAAAAT 15373
|| | ||| ||||| || ||||| || || || ||||| || |||||||||||| ||
Sbjct 1509681 TCCAGGGTGATGGTCTTCCCTGTAAGTGTCTTGACAAAGATCTGCATATTTGAAGAT 1509625
Score = 107 bits (118), Expect = 1e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|| |||| | ||||| ||| | |||||| ||||| |||||||| ||||| |||||
Sbjct 1510773 CCTCCTCGAAGTCTTAGAACCAGATGAAGTGTGGATTCTTTTTGAATGTTATAATCTGAC 1510714
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
|| | || | ||||| | || || || || | || || ||||| ||||| |||
Sbjct 1510713 AGTGTCCTTCCATCTTCGAGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGAGGA 1510654
Query 15257 ATTCCTTCTTTGTCACAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315
|||||||||||||| || || ||| || ||| | ||||| || || ||| ||
Sbjct 1510653 ATTCCTTCTTTGTCTTGGATCTTAGCT-TTGACATTCTCTATTGTGTCTGAGGCTTCCAC 1510595
Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
|||| ||| || ||||| ||||| ||||| || || || ||||||||
Sbjct 1510594 TTCTAGGGTGATAGTTTTCCCTGTGAGAGTCTTCACGAAGATTTGCAT 1510547
Score = 100 bits (110), Expect = 2e-16
Identities = 154/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 15148 TCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGC 15207
||| | ||| | |||||| ||||| |||||||| ||||||||||| || | ||| |
Sbjct 1515887 TCTCAGAACCAGATGAAGTGTGGATTCTTTTTGAATGTTGTAATCAGAGAGTGTCCTCCC 1515828
Query 15208 GTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTT 15267
||||| | || || || || | || || ||||| || || || ||||| |||||
Sbjct 1515827 ATCTTCGAGCTGCTTTCCTGCAAAGATTAATCGTTGCTGATCTGGAGGTATTCCCTCTTT 1515768
Query 15268 GTCACAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAA 15326
||| || || ||| || ||| | ||||| || || | ||| || || | ||| |
Sbjct 1515767 GTCCTGGATCTTAGCT-TTGACATTCTCTATTGTGTCAGAAGCTTCGACTTCCAGGGTGA 1515709
Query 15327 TGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
||||||| ||||| ||||| || || || ||||||||
Sbjct 1515708 TGGTTTTTCCTGTGAGAGTCTTGACGAAGATTTGCAT 1515672
Score = 91.5 bits (100), Expect = 1e-13
Identities = 144/204 (71%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220
||||| || || |||||||| || || ||||| || | || | ||||| | ||
Sbjct 1514727 TGAAGTGTTGATTCTTTTTGAATATTATAATCTGAAAGTGTCCTTCCATCTTCCAGCTGC 1514668
Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAAT-TTT 15279
|| ||||| | || || ||||| || || |||||||||||||| || || ||
Sbjct 1514667 TTTCCAGCAAAGATTAATCGTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGGATCTTA 1514608
Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339
||| || ||| | ||||| ||||| | ||| || || | ||| |||||||| |||||
Sbjct 1514607 GCT-TTGACATTCTCTATCGTATCTGAAGCTTCGACTTCCAGGGTGATGGTTTTCCCTGT 1514549
Query 15340 CAGAGTTTTTACAAAAATTTGCAT 15363
|| || || ||||| ||||||||
Sbjct 1514548 GAGTGTCTTGACAAAGATTTGCAT 1514525
>seq467
Length=2555529
Score = 116 bits (128), Expect = 3e-21
Identities = 148/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 15160 ATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTG 15219
||||||||| || |||||||| || ||||||||| || | | | |||||||||||
Sbjct 1364638 ATGAAGGGTTGATTCTTTTTGAATATTGTAATCGGATAACGTGCGTCCATCTTCTAATTG 1364697
Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT 15279
||| ||||| | ||||| | |||||| || ||||| ||||||||||| ||||||
Sbjct 1364698 TTTACCAGCAAAGATCAATCTTTGTTGATCTGGAGGAATACCTTCTTTGTCCTGAATTTT 1364757
Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339
||||||| | || ||||| || || || || ||||| || ||||| || ||
Sbjct 1364758 AGCCTTTACATTCTCAATGGTGTCAGATGCCTCAACTTCCAAGGTTATAGTTTTTCCAGT 1364817
Query 15340 CAGAGTTTTTACAAAAATTTGCAT 15363
|| ||||| || || || |||||
Sbjct 1364818 AAGGGTTTTCACGAATATCTGCAT 1364841
Score = 111 bits (122), Expect = 1e-19
Identities = 147/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 15160 ATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTG 15219
||||||||| || |||||||| || ||||||||| || | | | |||||||||||
Sbjct 1365911 ATGAAGGGTTGATTCTTTTTGAATATTGTAATCGGATAACGTGCGTCCATCTTCTAATTG 1365970
Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT 15279
||| ||||| | ||||| | |||||| || ||||| ||||||||||| ||||||
Sbjct 1365971 TTTACCAGCAAAGATCAATCTTTGTTGATCTGGAGGAATACCTTCTTTGTCCTGAATTTT 1366030
Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339
| || ||| |||| || ||||| ||| || || | || ||||| || || ||
Sbjct 1366031 GGCTTTAACATTTTCAATTGTATCTGATGCTTCCACTTCGAGAGTGATGGTCTTTCCAGT 1366090
Query 15340 CAGAGTTTTTACAAAAATTTGCAT 15363
|| || ||||| || || |||||
Sbjct 1366091 CAATGTCTTTACGAAGATCTGCAT 1366114
Score = 93.3 bits (102), Expect = 3e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214
|||||||| || || || ||||| || || |||||||| || | | | |||||
Sbjct 1364177 ACTAAATGGAGAGTAGATTCTTTCTGAATATTGTAATCAGAAAGTGTACGACCATCTTCC 1364236
Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274
| |||||| |||||| | || || | || || || |||||| ||||||||||| |
Sbjct 1364237 AGTTGTTTACCAGCGAAGATTAATCTCTGCTGATCTGGTGGAATGCCTTCTTTGTCTTGA 1364296
Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334
||||| ||| || |||| || || || || || || | || ||||||||
Sbjct 1364297 ATTTTTGCCTTCACGTTTTCAATAGTGTCAGACGCCTCAACTTCCAGAGTTATGGTTTTT 1364356
Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
|| || ||||| || ||||||||||||||
Sbjct 1364357 CCAGTAAGAGTCTTCACAAAAATTTGCAT 1364385
Score = 93.3 bits (102), Expect = 3e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 15160 ATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTG 15219
||| || || || ||||| || ||||| || || || | | | ||||| |||||
Sbjct 1365227 ATGGAGTGTCGACTCTTTCTGAATGTTATAGTCAGATAATGTGCGTCCATCTTCCAATTG 1365286
Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT 15279
||||||||| | ||||| | |||||||| ||||| ||||||||||| ||||||
Sbjct 1365287 TTTGCCAGCAAAAATCAACCTCTGTTGGTCTGGAGGAATACCTTCTTTGTCCTGAATTTT 1365346
Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339
||||||| | || ||||| || || || || ||||| || ||||| || ||
Sbjct 1365347 AGCCTTTACATTCTCAATGGTGTCAGATGCCTCAACTTCCAAGGTTATAGTTTTTCCAGT 1365406
Query 15340 CAGAGTTTTTACAAAAATTTGCAT 15363
|| ||||| || || || |||||
Sbjct 1365407 AAGGGTTTTCACGAATATCTGCAT 1365430
Score = 87.8 bits (96), Expect = 1e-12
Identities = 153/220 (70%), Gaps = 16/220 (7%)
Strand=Plus/Plus
Query 15160 ATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTG 15219
||||||||| || |||||||| || ||||||||| || | | | |||||||||||
Sbjct 1364985 ATGAAGGGTTGATTCTTTTTGAATATTGTAATCGGATAACGTGCGTCCATCTTCTAATTG 1365044
Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCA-------C 15272
||| ||||| | ||||| | |||||| || ||||| |||||||||| | |
Sbjct 1365045 TTTACCAGCAAAGATCAATCTTTGTTGATCTGGAGGAATACCTTCTTTGTGATGCCTTCC 1365104
Query 15273 AAAT------TTTGCTCTTT-ACAATTTCTATGGTATCGCTAT-TTTCTACATCTAAGGT 15324
|| ||| |||| || | || || || || | || || || || || ||
Sbjct 1365105 TTATCCTGGATTTTAGCTTTAACGTTCTCAATAGTGTC-CGATGCCTCAACTTCCAAAGT 1365163
Query 15325 AATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
|||||| || || || |||||||| || ||||||||||||
Sbjct 1365164 AATGGTCTTTCCGGTAAGAGTTTTCACGAAAATTTGCATA 1365203
Score = 82.4 bits (90), Expect = 6e-11
Identities = 142/204 (70%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220
||||| || || || ||||| || ||||| || || | | | ||||| ||||||
Sbjct 1366140 TGAAGAGTAGATTCCTTTTGAATATTGTAGTCAGATAATGTGCGTCCATCTTCCAATTGT 1366199
Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT- 15279
||||||||| | |||| | ||||||||| ||||| || ||||| || ||||||
Sbjct 1366200 TTGCCAGCGAAGATCAGTCTTTGTTGGTCTGGAGGAATACCCTCTTTATCCTGAATTTTA 1366259
Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339
||| || ||| |||| || || || ||| || || | || ||||| || || ||
Sbjct 1366260 GCT-TTAACATTTTCAATAGTGTCTGAGGCTTCAACTTCAAGAGTGATGGTCTTTCCAGT 1366318
Query 15340 CAGAGTTTTTACAAAAATTTGCAT 15363
|| || ||||| || || |||||
Sbjct 1366319 CAATGTCTTTACGAAGATCTGCAT 1366342
Score = 82.4 bits (90), Expect = 6e-11
Identities = 142/204 (70%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220
||||| || || || |||||||| ||||| || || | | | ||||||||||||
Sbjct 1366368 TGAAGTGTAGATTCCTTTTGTATATTGTAGTCAGAAAGTGTGCGTCCATCTTCTAATTGT 1366427
Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGT-CACAAATTTT 15279
|| |||||| | ||||| | || || || ||| || || ||||| | | | ||||
Sbjct 1366428 TTACCAGCGAAGATCAATCTCTGCTGATCTGGTGGGATGCCCTCTTTATCCTGGATTTTT 1366487
Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339
||| || ||| | || ||||| || || || || | ||| |||||||| || ||
Sbjct 1366488 GCT-TTAACATTCTCGATGGTGTCTGATGCCTCAACCTCGAGGGTTATGGTTTTTCCCGT 1366546
Query 15340 CAGAGTTTTTACAAAAATTTGCAT 15363
|| || ||||| ||||| |||||
Sbjct 1366547 CAATGTCTTTACGAAAATCTGCAT 1366570
>seq321
Length=1097274
Score = 107 bits (118), Expect = 1e-18
Identities = 119/156 (76%), Gaps = 2/156 (1%)
Strand=Plus/Plus
Query 15209 TCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTG 15268
|||||||||||||| |||||| | || | ||| ||||| || |||||||||||||||
Sbjct 785306 TCTTCTAATTGTTTTCCAGCGAAAATTAGACGCTGTTGATCAGGTGGAATTCCTTCTTTA 785365
Query 15269 TCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAAT 15327
|| |||||| ||| |||||| |||| |||||||| |||||| || | || ||
Sbjct 785366 TCTTGAATTTTAGCT-TTTACATTTTCGATGGTATCAGACGCTTCTACCTCGAGCGTGAT 785424
Query 15328 GGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
||||| || |||| |||||| || || || |||||
Sbjct 785425 AGTTTTGCCCGTCAAAGTTTTCACGAATATCTGCAT 785460
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 362151541506306
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