Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19] 6,266 sequences; 272,660,569 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq467 82.4 6e-11 >seq467 Length=2555529 Score = 82.4 bits (90), Expect = 6e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 18845 GTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTGTTTACCC 18904 ||||| || || |||||||||||||| | | ||| | || ||||| |||||||| Sbjct 1364189 GTAGATTCTTTCTGAATATTGTAATCAGAAAGTGTACGACCATCTTCCAGTTGTTTACCA 1364248 Query 18905 GCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTCTGTTTT 18964 || | || | |||||||||||| || | ||| |||||||| |||||| || Sbjct 1364249 GCGAAGATTAATCTCTGCTGATCTGGTGGAATGCCTTCTTTGTCTTGAATTTTTGCCTTC 1364308 Query 18965 ACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTACCTGTTAAAGTT 19024 || | | | ||| || | ||| ||| | || |||||||| || || | ||| Sbjct 1364309 ACGTTTTCAATAGTGTCAGACGCCTCAACTTCCAGAGTTATGGTTTTTCCAGTAAGAGTC 1364368 Query 19025 TTGACAAAAATTTGCATT 19042 || ||||||||||||||| Sbjct 1364369 TTCACAAAAATTTGCATT 1364386 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414541140370804