Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19]
6,266 sequences; 272,660,569 total letters
Query= NC_004778.3
Length=129593
Score E
Sequences producing significant alignments: (Bits) Value
seq467 82.4 6e-11
>seq467
Length=2555529
Score = 82.4 bits (90), Expect = 6e-11
Identities = 137/198 (69%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 18845 GTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTGTTTACCC 18904
||||| || || |||||||||||||| | | ||| | || ||||| ||||||||
Sbjct 1364189 GTAGATTCTTTCTGAATATTGTAATCAGAAAGTGTACGACCATCTTCCAGTTGTTTACCA 1364248
Query 18905 GCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTCTGTTTT 18964
|| | || | |||||||||||| || | ||| |||||||| |||||| ||
Sbjct 1364249 GCGAAGATTAATCTCTGCTGATCTGGTGGAATGCCTTCTTTGTCTTGAATTTTTGCCTTC 1364308
Query 18965 ACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTACCTGTTAAAGTT 19024
|| | | | ||| || | ||| ||| | || |||||||| || || | |||
Sbjct 1364309 ACGTTTTCAATAGTGTCAGACGCCTCAACTTCCAGAGTTATGGTTTTTCCAGTAAGAGTC 1364368
Query 19025 TTGACAAAAATTTGCATT 19042
|| |||||||||||||||
Sbjct 1364369 TTCACAAAAATTTGCATT 1364386
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 414541140370804
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |