Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19]
6,266 sequences; 272,660,569 total letters
Query= NC_005068.1
Length=110907
Score E
Sequences producing significant alignments: (Bits) Value
seq307 107 1e-18
seq467 102 6e-17
seq321 86.0 4e-12
>seq307
Length=2169461
Score = 107 bits (118), Expect = 1e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954
||||||| | ||||| |||| ||| || ||| ||||||||||| ||||||||
Sbjct 1515670 CCTCCTCGAAGTCTTAGAACCAGATGAAGGGTGGATTCTTTTTGAATGTTATAATCTGAC 1515611
Query 43955 AATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGT 44014
| | | | |||| || | || ||||||||||| || || ||||||||||| ||||
Sbjct 1515610 AGTGTCCTCCCATCTTCGAGCTGCTTTCCTGCAAAGATTAATCGTTGCTGGTCTGGAGGA 1515551
Query 44015 ACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACA 44074
| |||||||| ||| || || |||||| | | | || |||| | |||||
Sbjct 1515550 ATTCCTTCTTTGTCTTGGATCTTAGCTTTGACATTCTCTATTGTGTCTGAGGCTTCCACT 1515491
Query 44075 TCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|| | || || ||||| || || | ||||||||| || ||||||||
Sbjct 1515490 TCTAGGGTGATAGTTTTCCCTGTGAGAGTCTTCACGAAGATTTGCAT 1515444
Score = 102 bits (112), Expect = 6e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954
||||||| | ||||| |||| ||| || ||| ||||||||||| |||||||| |
Sbjct 1510773 CCTCCTCGAAGTCTTAGAACCAGATGAAGTGTGGATTCTTTTTGAATGTTATAATC-TGA 1510715
Query 43955 AATTGACGCTC-ATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013
| || | || ||| || | || || |||||||| || || ||||||||||| ||||
Sbjct 1510714 CAGTGTCCTTCCATCTTCGAGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGAGG 1510655
Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073
| |||||||| ||| || || |||||| | | | || |||| | |||||
Sbjct 1510654 AATTCCTTCTTTGTCTTGGATCTTAGCTTTGACATTCTCTATTGTGTCTGAGGCTTCCAC 1510595
Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|| | || || ||||| || || | ||||||||| || ||||||||
Sbjct 1510594 TTCTAGGGTGATAGTTTTCCCTGTGAGAGTCTTCACGAAGATTTGCAT 1510547
Score = 98.7 bits (108), Expect = 7e-16
Identities = 160/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954
||||||| | ||| | ||| | || || || |||||||||||||||||||| |
Sbjct 1514751 CCTCCTCGAAGTCTCAGCACAAGGTGAAGTGTTGATTCTTTTTGAATATTATAATC-TGA 1514693
Query 43955 AATTGACGCTC-ATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013
|| || | || ||| |||| || ||||| ||||| || || |||||||| || ||||
Sbjct 1514692 AAGTGTCCTTCCATCTTCCAGCTGCTTTCCAGCAAAGATTAATCGTTGCTGATCAGGAGG 1514633
Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073
| |||||||||||| || || |||||| | | | ||||||| | || ||
Sbjct 1514632 AATTCCTTCTTTATCTTGGATCTTAGCTTTGACATTCTCTATCGTATCTGAAGCTTCGAC 1514573
Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|| | || || ||||| || || | ||||| ||||| ||||||||
Sbjct 1514572 TTCCAGGGTGATGGTTTTCCCTGTGAGTGTCTTGACAAAGATTTGCAT 1514525
>seq467
Length=2555529
Score = 102 bits (112), Expect = 6e-17
Identities = 137/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 43931 TCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAAT 43990
|||||||||||||| |||||| ||| || |||| || |||||||| || |||||
Sbjct 1365924 TCTTTTTGAATATTGTAATCGGATAACGTGCGTCCATCTTCTAATTGTTTACCAGCAAAG 1365983
Query 43991 ATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATA 44050
||||| | ||| || || |||| | ||||||||| || |||||| ||| || |
Sbjct 1365984 ATCAATCTTTGTTGATCTGGAGGAATACCTTCTTTGTCCTGAATTTTGGCTTTAACATTT 1366043
Query 44051 GCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACA 44110
||| ||||||| | ||||| |||| || || || || || || || ||||| ||
Sbjct 1366044 TCAATTGTATCTGATGCTTCCACTTCGAGAGTGATGGTCTTTCCAGTCAATGTCTTTACG 1366103
Query 44111 AATATTTGCAT 44121
|| || |||||
Sbjct 1366104 AAGATCTGCAT 1366114
Score = 95.1 bits (104), Expect = 9e-15
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954
||||| || | || | || ||||| || || ||||| |||||||| |||||
Sbjct 1364159 CCTCCCCTGAGTCGAAGTACTAAATGGAGAGTAGATTCTTTCTGAATATTGTAATCAGAA 1364218
Query 43955 AATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGT 44014
| | ||| |||| |||| |||||| || || || || || | ||||| || | ||
Sbjct 1364219 AGTGTACGACCATCTTCCAGTTGTTTACCAGCGAAGATTAATCTCTGCTGATCTGGTGGA 1364278
Query 44015 ACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACA 44074
| |||||||| ||| ||||||| || || | ||| ||| || | || ||| ||
Sbjct 1364279 ATGCCTTCTTTGTCTTGAATTTTTGCCTTCACGTTTTCAATAGTGTCAGACGCCTCAACT 1364338
Query 44075 TCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|| | || || ||||| || || | |||||||||||| ||||||||
Sbjct 1364339 TCCAGAGTTATGGTTTTTCCAGTAAGAGTCTTCACAAAAATTTGCAT 1364385
Score = 89.7 bits (98), Expect = 4e-13
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 43930 CTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAA 43989
|||||| ||||| ||||| || |||| || |||| ||||||||||| || |||||
Sbjct 1365239 CTCTTTCTGAATGTTATAGTCAGATAATGTGCGTCCATCTTCCAATTGTTTGCCAGCAAA 1365298
Query 43990 TATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTTTTGTTTGACCAT 44049
||||||| || ||||| |||| | ||||||||| || |||||| || || |
Sbjct 1365299 AATCAACCTCTGTTGGTCTGGAGGAATACCTTCTTTGTCCTGAATTTTAGCCTTTACATT 1365358
Query 44050 AGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCAC 44109
||| || || | | ||| || || | || || ||||| || || | || |||||
Sbjct 1365359 CTCAATGGTGTCAGATGCCTCAACTTCCAAGGTTATAGTTTTTCCAGTAAGGGTTTTCAC 1365418
Query 44110 AAATATTTGCAT 44121
||||| |||||
Sbjct 1365419 GAATATCTGCAT 1365430
Score = 87.8 bits (96), Expect = 1e-12
Identities = 134/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 43931 TCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAAT 43990
|||||||||||||| |||||| ||| || |||| || |||||||| || |||||
Sbjct 1364651 TCTTTTTGAATATTGTAATCGGATAACGTGCGTCCATCTTCTAATTGTTTACCAGCAAAG 1364710
Query 43991 ATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATA 44050
||||| | ||| || || |||| | ||||||||| || |||||| || || |
Sbjct 1364711 ATCAATCTTTGTTGATCTGGAGGAATACCTTCTTTGTCCTGAATTTTAGCCTTTACATTC 1364770
Query 44051 GCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACA 44110
||| || || | | ||| || || | || || ||||| || || | || |||||
Sbjct 1364771 TCAATGGTGTCAGATGCCTCAACTTCCAAGGTTATAGTTTTTCCAGTAAGGGTTTTCACG 1364830
Query 44111 AATATTTGCAT 44121
||||| |||||
Sbjct 1364831 AATATCTGCAT 1364841
Score = 87.8 bits (96), Expect = 1e-12
Identities = 134/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 43931 TCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAAT 43990
|||||||| ||||||||||| | | ||| |||| |||||||| || || |||||
Sbjct 1365468 TCTTTTTGGATATTATAATCAGAAAGTGTACGTCCATCTTCCAATTGCTTGCCAGCAAAG 1365527
Query 43991 ATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATA 44050
|| || | |||||||| |||| | |||||| || || ||||| ||| || |
Sbjct 1365528 ATTAATCTCTGCTGGTCTGGAGGGATACCTTCCTTGTCCTGGATTTTAGCTTTCACATTT 1365587
Query 44051 GCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACA 44110
||| || |||| || ||| || || | || || ||||| || || | || |||||
Sbjct 1365588 TCAATGGTGTCTGACGCCTCAACTTCCAAGGTTATAGTTTTTCCAGTAAGGGTTTTCACG 1365647
Query 44111 AATATTTGCAT 44121
||||| |||||
Sbjct 1365648 AATATCTGCAT 1365658
Score = 84.2 bits (92), Expect = 2e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 43931 TCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAAT 43990
|||||||| ||||||||||| | | ||| |||| |||||||| || || |||||
Sbjct 1365696 TCTTTTTGGATATTATAATCAGAAAGTGTACGTCCATCTTCCAATTGCTTGCCAGCAAAG 1365755
Query 43991 ATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATA 44050
|| || | |||||||| |||| | |||||| || || ||||| ||| || |
Sbjct 1365756 ATTAATCTCTGCTGGTCTGGAGGGATACCTTCCTTGTCCTGGATTTTAGCTTTCACGTTT 1365815
Query 44051 GCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACA 44110
||| ||||| | || ||| || || | || |||||||| || || | || || ||
Sbjct 1365816 TCAATGGTATCGGACGCCTCAACTTCCAATGTTATTGTTTTTCCAGTAAGTGTTTTTACG 1365875
Query 44111 AATATTTGCAT 44121
|| || |||||
Sbjct 1365876 AAGATCTGCAT 1365886
Score = 84.2 bits (92), Expect = 2e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 43931 TCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAAT 43990
|| ||||||||||| || || |||| || |||| ||||||||||| || || ||
Sbjct 1366152 TCCTTTTGAATATTGTAGTCAGATAATGTGCGTCCATCTTCCAATTGTTTGCCAGCGAAG 1366211
Query 43991 ATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATA 44050
|||| | ||| ||||| |||| | ||| |||||||| |||||| ||| || |
Sbjct 1366212 ATCAGTCTTTGTTGGTCTGGAGGAATACCCTCTTTATCCTGAATTTTAGCTTTAACATTT 1366271
Query 44051 GCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACA 44110
||| ||| |||| | || || || | || || || || || || || ||||| ||
Sbjct 1366272 TCAATAGTGTCTGAGGCTTCAACTTCAAGAGTGATGGTCTTTCCAGTCAATGTCTTTACG 1366331
Query 44111 AATATTTGCAT 44121
|| || |||||
Sbjct 1366332 AAGATCTGCAT 1366342
>seq321
Length=1097274
Score = 86.0 bits (94), Expect = 4e-12
Identities = 133/190 (70%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 43932 CTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATA 43991
|||| || ||||||||||| | ||| |||| || ||||||||||| || || |
Sbjct 785271 CTTTCTGGATATTATAATCAGAGAGGGTACGTCCATCTTCTAATTGTTTTCCAGCGAAAA 785330
Query 43992 TCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAG 44051
| | || || || || | || | |||||||||||| |||||| ||| || |
Sbjct 785331 TTAGACGCTGTTGATCAGGTGGAATTCCTTCTTTATCTTGAATTTTAGCTTTTACATTTT 785390
Query 44052 CAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAA 44111
| | ||||| | || || || |||| ||| || ||||| || || ||||| ||||| |
Sbjct 785391 CGATGGTATCAGACGCTTCTACCTCGAGCGTGATAGTTTTGCCCGTCAAAGTTTTCACGA 785450
Query 44112 ATATTTGCAT 44121
|||| |||||
Sbjct 785451 ATATCTGCAT 785460
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 354750506743368
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