Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19] 6,266 sequences; 272,660,569 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq202 150 2e-31 seq746 122 1e-22 >seq202 Length=497029 Score = 150 bits (166), Expect = 2e-31 Identities = 191/263 (73%), Gaps = 0/263 (0%) Strand=Plus/Minus Query 7141 ATACCCTGACCTTCATAATTAGTATGACAATTTATATAATTAGCTCCAAAATGTCTCCAT 7200 ||||| || |||| |||||||||||| || | || | |||||| ||||||||||| Sbjct 1112 ATACCTTGCCCTTTATAATTAGTATGCATGTTCTTGTACTCTGCTCCATAATGTCTCCAT 1053 Query 7201 TGAAACCCATAAATAGGACCTAAATCACCTTCTTCACGATGATTAAATCCTAATCGATTT 7260 ||||| ||||| | ||| || | ||| |||||||| | | | ||||||| | || | Sbjct 1052 TGAAATCCATATACAGGTCCCAGATCTCCTTCTTCTCTGTCAGTAAATCCACAAGAATCT 993 Query 7261 AAATTAGATTTTGATCCATAAGCATCCCAAATATGTACAGAtttttttGATAAATTTAAA 7320 | | | || | || |||||||||||||| ||| || | |||||| | | Sbjct 992 AGGTATGTACGCGAACTATTTGCATCCCAAATATGAACATTCTTCTCTGATAACTCTTTT 933 Query 7321 GAATTTGTAGATCCTTTAAGGAACCATAAAAGTTCTTCTACTATTCCACGCCAAAACATT 7380 | |||||| |||||||| | |||||||| | ||||||||||| ||| | |||||||| | Sbjct 932 GCATTTGTGGATCCTTTTATAAACCATAACAATTCTTCTACTACTCCCCTCCAAAACACT 873 Query 7381 CTTTTTGTAGTGAATAAAGGGAA 7403 ||||||||| ||||| || || Sbjct 872 TGTTTTGTAGTTAATAATGGAAA 850 >seq746 Length=44245 Score = 122 bits (134), Expect = 1e-22 Identities = 217/311 (70%), Gaps = 8/311 (3%) Strand=Plus/Minus Query 164393 ATTGGAATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCA 164452 ||||| | || || |||||||| | |||||| ||||| |||||| | || || Sbjct 31426 ATTGGGACTTCCAAAAAATGGGAATTGGTGGATTAGATAAAGAATTCAGTGCAATCTTTC 31367 Query 164453 GACGAGCATTTGCTTCTAGATCAGTTCCTATC-GAAATAATaaaaaaaTTAGGCTGTAAA 164511 || |||||||||| || ||| |||| | | ||||| | | ||||||| ||||| Sbjct 31366 GAAGAGCATTTGCATCAAGAGTT-TTCCCACCAGAAATTGTTACTCAATTAGGTTGTAAG 31308 Query 164512 CATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGA 164571 ||| | |||||||||||| | |||| || || ||| |||||||| |||||||| ||| Sbjct 31307 CATGTGAAAGGAATTTTACTTTATGGTCCACCAGGTACTGGTAAAACGTTAATGGCACGA 31248 Query 164572 TGCATTGCTCAAGCTTTTAAA---TCGCGACCCGTTAAAATTGTTAATGGTCCTGAATTA 164628 || | | | || || | | || || |||||| || ||||| ||| | | Sbjct 31247 CAGATAG-GAACTATGTTGAATGCTAGAGAACC--TAAAATCGTCAATGGCCCTCAGATT 31191 Query 164629 TTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAA 164688 ||| | |||||||| ||||| ||||| ||| |||||| ||| ||| || |||||| Sbjct 31190 TTGGATAAATATGTTGGTGAAAGTGAAGCCAATATTAGAAGGTTATTTGCTGATGCTGAA 31131 Query 164689 GAAGAACAAAA 164699 || ||| |||| Sbjct 31130 GACGAAGAAAA 31120 Score = 105 bits (116), Expect = 8e-18 Identities = 102/131 (78%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 164785 CATGATGCAGTGGTTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAAT 164844 |||||| | || |||||||| || ||| | ||||| |||||||||||| |||||||| Sbjct 30947 CATGATACGGTTGTTAATCAATTACTTGCAAAAATTGATGGTGTAGAACAGTTAAATAAC 30888 Query 164845 ATTTTAATTGTAGGTATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCT 164904 ||| | | | |||||||| ||| | ||| | |||||||| ||||| ||||||||| Sbjct 30887 ATTCTTGTAATTGGTATGACTAACAGGAGAGATATGATTGATGAAGCTTTGTTACGACCT 30828 Query 164905 GGTCGATTAGA 164915 ||| ||||||| Sbjct 30827 GGTAGATTAGA 30817 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595825328325600