Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19]
6,266 sequences; 272,660,569 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq202 150 2e-31
seq746 122 1e-22
>seq202
Length=497029
Score = 150 bits (166), Expect = 2e-31
Identities = 191/263 (73%), Gaps = 0/263 (0%)
Strand=Plus/Minus
Query 7141 ATACCCTGACCTTCATAATTAGTATGACAATTTATATAATTAGCTCCAAAATGTCTCCAT 7200
||||| || |||| |||||||||||| || | || | |||||| |||||||||||
Sbjct 1112 ATACCTTGCCCTTTATAATTAGTATGCATGTTCTTGTACTCTGCTCCATAATGTCTCCAT 1053
Query 7201 TGAAACCCATAAATAGGACCTAAATCACCTTCTTCACGATGATTAAATCCTAATCGATTT 7260
||||| ||||| | ||| || | ||| |||||||| | | | ||||||| | || |
Sbjct 1052 TGAAATCCATATACAGGTCCCAGATCTCCTTCTTCTCTGTCAGTAAATCCACAAGAATCT 993
Query 7261 AAATTAGATTTTGATCCATAAGCATCCCAAATATGTACAGAtttttttGATAAATTTAAA 7320
| | | || | || |||||||||||||| ||| || | |||||| | |
Sbjct 992 AGGTATGTACGCGAACTATTTGCATCCCAAATATGAACATTCTTCTCTGATAACTCTTTT 933
Query 7321 GAATTTGTAGATCCTTTAAGGAACCATAAAAGTTCTTCTACTATTCCACGCCAAAACATT 7380
| |||||| |||||||| | |||||||| | ||||||||||| ||| | |||||||| |
Sbjct 932 GCATTTGTGGATCCTTTTATAAACCATAACAATTCTTCTACTACTCCCCTCCAAAACACT 873
Query 7381 CTTTTTGTAGTGAATAAAGGGAA 7403
||||||||| ||||| || ||
Sbjct 872 TGTTTTGTAGTTAATAATGGAAA 850
>seq746
Length=44245
Score = 122 bits (134), Expect = 1e-22
Identities = 217/311 (70%), Gaps = 8/311 (3%)
Strand=Plus/Minus
Query 164393 ATTGGAATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCA 164452
||||| | || || |||||||| | |||||| ||||| |||||| | || ||
Sbjct 31426 ATTGGGACTTCCAAAAAATGGGAATTGGTGGATTAGATAAAGAATTCAGTGCAATCTTTC 31367
Query 164453 GACGAGCATTTGCTTCTAGATCAGTTCCTATC-GAAATAATaaaaaaaTTAGGCTGTAAA 164511
|| |||||||||| || ||| |||| | | ||||| | | ||||||| |||||
Sbjct 31366 GAAGAGCATTTGCATCAAGAGTT-TTCCCACCAGAAATTGTTACTCAATTAGGTTGTAAG 31308
Query 164512 CATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGA 164571
||| | |||||||||||| | |||| || || ||| |||||||| |||||||| |||
Sbjct 31307 CATGTGAAAGGAATTTTACTTTATGGTCCACCAGGTACTGGTAAAACGTTAATGGCACGA 31248
Query 164572 TGCATTGCTCAAGCTTTTAAA---TCGCGACCCGTTAAAATTGTTAATGGTCCTGAATTA 164628
|| | | | || || | | || || |||||| || ||||| ||| | |
Sbjct 31247 CAGATAG-GAACTATGTTGAATGCTAGAGAACC--TAAAATCGTCAATGGCCCTCAGATT 31191
Query 164629 TTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAA 164688
||| | |||||||| ||||| ||||| ||| |||||| ||| ||| || ||||||
Sbjct 31190 TTGGATAAATATGTTGGTGAAAGTGAAGCCAATATTAGAAGGTTATTTGCTGATGCTGAA 31131
Query 164689 GAAGAACAAAA 164699
|| ||| ||||
Sbjct 31130 GACGAAGAAAA 31120
Score = 105 bits (116), Expect = 8e-18
Identities = 102/131 (78%), Gaps = 0/131 (0%)
Strand=Plus/Minus
Query 164785 CATGATGCAGTGGTTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAAT 164844
|||||| | || |||||||| || ||| | ||||| |||||||||||| ||||||||
Sbjct 30947 CATGATACGGTTGTTAATCAATTACTTGCAAAAATTGATGGTGTAGAACAGTTAAATAAC 30888
Query 164845 ATTTTAATTGTAGGTATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCT 164904
||| | | | |||||||| ||| | ||| | |||||||| ||||| |||||||||
Sbjct 30887 ATTCTTGTAATTGGTATGACTAACAGGAGAGATATGATTGATGAAGCTTTGTTACGACCT 30828
Query 164905 GGTCGATTAGA 164915
||| |||||||
Sbjct 30827 GGTAGATTAGA 30817
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595825328325600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |