Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19] 6,266 sequences; 272,660,569 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq202 120 8e-22 >seq202 Length=497029 Score = 120 bits (132), Expect = 8e-22 Identities = 170/239 (71%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 111315 TTTCCACTTCTCACAACAAAGCGAACATATTGGAAGGGAATTGTCGAAGAACTTCTGTGG 111374 |||||| | | || ||||| | | | ||||| |||| | || |||||| | | ||| Sbjct 850 TTTCCATTATTAACTACAAAACAAGTGTTTTGGAGGGGAGTAGTAGAAGAATTGTTATGG 909 Query 111375 TTTATTCGCGGAAGTACAAATGCAAATGAACTTGCAGCAAAAAATGTAAAAATTTGGGAT 111434 ||||| ||| ||||||||||| || | ||| || ||||| | ||||||||| Sbjct 910 TTTATAAAAGGATCCACAAATGCAAAAGAGTTATCAGAGAAGAATGTTCATATTTGGGAT 969 Query 111435 GGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTCGACAACGAAGAAGGTGAT 111494 | |||| | || ||| | |||||||| ||| || |||| |||||||| ||| Sbjct 970 GCAAATAGTTCGCGTACATACCTAGATTCTTGTGGATTTACTGACAGAGAAGAAGGAGAT 1029 Query 111495 CTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAACCATGCA 111553 || ||||| || || |||||||||||| | || | ||| ||||| ||||| | |||||| Sbjct 1030 CTGGGACCTGTATATGGATTTCAATGGAGACATTATGGAGCAGAGTACAAGAACATGCA 1088 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303248962700012