Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19]
6,266 sequences; 272,660,569 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq467 107 2e-18
seq307 104 2e-17
>seq467
Length=2555529
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| || || | ||| | || ||||| || ||||||||||| ||
Sbjct 1364387 CCACCACGAAGACGGAGTACAAGATGGAGTGTTGACTCTTTCTGAATGTTGTAGTCAGAT 1364446
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| || |||| |||||| || ||| |||| || | |||||||| || |||
Sbjct 1364447 AGTGTGCGCCCATCTTCTAACTGCTTACCAGCGAAGATCAATCTTTGCTGGTCTGGGGGG 1364506
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| |||||||| || |||||| ||| | | ||| | ||| || | | ||| |
Sbjct 1364507 ATGCCTTCTTTATCCTGGATTTTAGCCTTAACGTTCTCAATAGTGTCTGATGCCTCAACT 1364566
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | |||| ||| || || || |||||||| || || ||||||||
Sbjct 1364567 TCCAAAGTAATGGTCTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 1364613
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| || || | ||| | ||| || || ||||| || || |||||
Sbjct 1365660 CCACCACGGAGACGGAGAACGAGATGAAGGGTTGATTCTTTTTGGATATTATAATCAGAA 1365719
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || || || | |||||||| || ||||||| | ||||||||| ||||||
Sbjct 1365720 AGTGTACGTCCATCTTCCAATTGCTTGCCAGCAAAGATTAATCTCTGCTGGTCTGGAGGG 1365779
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||| ||||| |||||| || | | || | ||||||| | ||| |
Sbjct 1365780 ATACCTTCCTTGTCCTGGATTTTAGCTTTCACGTTTTCAATGGTATCGGACGCCTCAACT 1365839
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | ||||| || || || ||||||||||| ||||||||
Sbjct 1365840 TCCAATGTTATTGTTTTTCCAGTAAGTGTTTTTACGAAGATCTGCAT 1365886
Score = 91.5 bits (100), Expect = 1e-13
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| || || | || | || || |||||||| || ||||| ||
Sbjct 1366344 CCACCACGGAGACGGAGTACAAGGTGAAGTGTAGATTCCTTTTGTATATTGTAGTCAGAA 1366403
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| || |||| || || || ||| |||| || | |||||| || || |||
Sbjct 1366404 AGTGTGCGTCCATCTTCTAATTGTTTACCAGCGAAGATCAATCTCTGCTGATCTGGTGGG 1366463
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGAT 131186
|| || ||||| || |||||| ||||| | | | ||| | || || | | ||| |
Sbjct 1366464 ATGCCCTCTTTATCCTGGATTTT-TGCTTTAACATTCTCGATGGTGTCTGATGCCTCAAC 1366522
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235
|||| ||| | |||||| || || | || ||||||||||||||||||
Sbjct 1366523 CTCGAGGGTTATGGTTTTTCCCGTCAATGTCTTTACGAAAATCTGCATG 1366571
Score = 86.0 bits (94), Expect = 6e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| || || | ||| | ||| || || |||||||| |||||||||
Sbjct 1364615 CCACCACGGAGACGGAGTACAAGATGAAGGGTTGATTCTTTTTGAATATTGTAATCGGAT 1364674
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| || |||| || || || || |||| || | || || || |||||
Sbjct 1364675 AACGTGCGTCCATCTTCTAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGAGGA 1364734
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||||||||| ||||| ||| | | ||| | || || | | ||| |
Sbjct 1364735 ATACCTTCTTTGTCCTGAATTTTAGCCTTTACATTCTCAATGGTGTCAGATGCCTCAACT 1364794
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | ||||| || || || ||||| ||||| ||||||||
Sbjct 1364795 TCCAAGGTTATAGTTTTTCCAGTAAGGGTTTTCACGAATATCTGCAT 1364841
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATC-GCT 131066
||||| || | ||| || || | ||| | |||||||| || |||||||| || || | |
Sbjct 1365204 CCACCACGGAGACGAAGTACAAGATGGAGTGTCGACTCTTTCTGAATGTTATAGTCAGAT 1365263
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
||| |||| || || | || ||||| || | || || | ||| ||||| |||||
Sbjct 1365264 AATG-TGCGTCCATCTTCCAATTGTTTGCCAGCAAAAATCAACCTCTGTTGGTCTGGAGG 1365322
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
|| ||||||||||| ||||| ||| | | ||| | || || | | ||| |
Sbjct 1365323 AATACCTTCTTTGTCCTGAATTTTAGCCTTTACATTCTCAATGGTGTCAGATGCCTCAAC 1365382
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | ||||| || || || ||||| ||||| ||||||||
Sbjct 1365383 TTCCAAGGTTATAGTTTTTCCAGTAAGGGTTTTCACGAATATCTGCAT 1365430
>seq307
Length=2169461
Score = 104 bits (114), Expect = 2e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097
|| || || ||||||||||| ||||| || || | || || |||||||| |||
Sbjct 1509831 GTGGATTCTTTTTGAATGTTATAATCTGACAGTGTCCTTCCATCTTCGAGCTGCTTCCCT 1509772
Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157
|| ||||||| || |||||||| ||||||||||| |||||||| ||| ||| ||||
Sbjct 1509771 GCAAAGATTAATCGTTGCTGGTCTGGAGGGATTCCCTCTTTGTCCTGGATCTTCGCCTTG 1509712
Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217
| | ||| | ||||| | | |||| || | ||| | ||| || || || || ||
Sbjct 1509711 ACATTCTCTATCGTATCTGAAGCTTCGACTTCCAGGGTGATGGTCTTCCCTGTAAGTGTC 1509652
Query 131218 TTTACGAAAATCTGCAT 131234
|| || || ||||||||
Sbjct 1509651 TTGACAAAGATCTGCAT 1509635
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 131023 AGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCC 131082
|| || | ||| | ||| || || ||||||||||| ||||| || || | | ||
Sbjct 1515655 AGAACCAGATGAAGGGTGGATTCTTTTTGAATGTTATAATCTGACAGTGTCCTCCCATCT 1515596
Query 131083 TCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCG 131142
|| |||||||| ||||| ||||||| || |||||||| ||||| ||||||||||||||
Sbjct 1515595 TCGAGCTGCTTTCCTGCAAAGATTAATCGTTGCTGGTCTGGAGGAATTCCTTCTTTGTCT 1515536
Query 131143 GTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTT 131202
||| || |||| | ||| | || || | || || | || | ||| | |||
Sbjct 1515535 TGGATCTTAGCTTTGACATTCTCTATTGTGTCTGAGGCTTCCACTTCTAGGGTGATAGTT 1515476
Query 131203 TTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| || || ||||| || ||||| || |||||
Sbjct 1515475 TTCCCTGTGAGAGTCTTCACGAAGATTTGCAT 1515444
Score = 98.7 bits (108), Expect = 9e-16
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097
|| || || ||||||||||| ||||| || || | || || |||||||| |||
Sbjct 1510287 GTGGATTCTTTTTGAATGTTATAATCTGACAGTGTCCTTCCATCTTCGAGCTGCTTCCCT 1510228
Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157
|| ||||||| || |||||||| ||||||||||| |||||||| ||| ||| |||
Sbjct 1510227 GCAAAGATTAATCGTTGCTGGTCTGGAGGGATTCCCTCTTTGTCCTGGATCTTCGCCTTT 1510168
Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217
| | || | || || | | |||| || | ||| | |||||| || || |||||
Sbjct 1510167 ACATTTTCAATTGTGTCAGAAGCTTCGACTTCCAGGGTGATGGTTTTTCCTGTGAGAGTC 1510108
Query 131218 TTTACGAAAATCTGCAT 131234
|| ||||| || |||||
Sbjct 1510107 TTGACGAAGATTTGCAT 1510091
Score = 98.7 bits (108), Expect = 9e-16
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097
|| || || ||||||||||| ||||| || || | || || |||||||| |||
Sbjct 1510515 GTGGATTCTTTTTGAATGTTATAATCTGACAGTGTCCTTCCATCTTCGAGCTGCTTCCCT 1510456
Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157
|| ||||||| || |||||||| ||||||||||| |||||||| ||| ||| |||
Sbjct 1510455 GCAAAGATTAATCGTTGCTGGTCTGGAGGGATTCCCTCTTTGTCCTGGATCTTCGCCTTT 1510396
Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217
| | || | || || | | |||| || | ||| | |||||| || || |||||
Sbjct 1510395 ACATTTTCAATTGTGTCAGAAGCTTCGACTTCCAGGGTGATGGTTTTTCCTGTGAGAGTC 1510336
Query 131218 TTTACGAAAATCTGCAT 131234
|| ||||| || |||||
Sbjct 1510335 TTGACGAAGATTTGCAT 1510319
Score = 98.7 bits (108), Expect = 9e-16
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097
|| || || ||||||||||| ||||| || || | || || |||||||| |||
Sbjct 1514949 GTGGATTCTTTTTGAATGTTATAATCTGACAGTGTCCTTCCATCTTCGAGCTGCTTCCCT 1514890
Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157
|| ||||||| || |||||||| ||||||||||| |||||||| ||| ||| |||
Sbjct 1514889 GCAAAGATTAATCGTTGCTGGTCTGGAGGGATTCCCTCTTTGTCCTGGATCTTCGCCTTT 1514830
Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217
| | || | || || | | |||| || | ||| | |||||| || || |||||
Sbjct 1514829 ACATTTTCAATTGTGTCAGAAGCTTCGACTTCCAGGGTGATGGTTTTTCCTGTGAGAGTC 1514770
Query 131218 TTTACGAAAATCTGCAT 131234
|| ||||| || |||||
Sbjct 1514769 TTGACGAAGATTTGCAT 1514753
Score = 96.9 bits (106), Expect = 3e-15
Identities = 149/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 131022 CAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTC 131081
||| || | ||| | || || || ||||||||||||||||| | || | | ||
Sbjct 1515884 CAGAACCAGATGAAGTGTGGATTCTTTTTGAATGTTGTAATCAGAGAGTGTCCTCCCATC 1515825
Query 131082 CTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTC 131141
|| |||||||| ||||| ||||||| || ||||| || ||||| ||||| ||||||||
Sbjct 1515824 TTCGAGCTGCTTTCCTGCAAAGATTAATCGTTGCTGATCTGGAGGTATTCCCTCTTTGTC 1515765
Query 131142 GGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGT 131201
||| || |||| | ||| | || || | | |||| || | ||| | |||
Sbjct 1515764 CTGGATCTTAGCTTTGACATTCTCTATTGTGTCAGAAGCTTCGACTTCCAGGGTGATGGT 1515705
Query 131202 TTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
||| || || ||||| || ||||| || |||||
Sbjct 1515704 TTTTCCTGTGAGAGTCTTGACGAAGATTTGCAT 1515672
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097
|| || || ||||||||||| ||||| || || | || || |||||||| |||
Sbjct 1510743 GTGGATTCTTTTTGAATGTTATAATCTGACAGTGTCCTTCCATCTTCGAGCTGCTTCCCT 1510684
Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157
|| ||||||| || |||||||| ||||| |||||||||||||| ||| || |||
Sbjct 1510683 GCAAAGATTAATCGTTGCTGGTCTGGAGGAATTCCTTCTTTGTCTTGGATCTTAGCTTTG 1510624
Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217
| | ||| | || || | || || | || | ||| | ||||| || || |||||
Sbjct 1510623 ACATTCTCTATTGTGTCTGAGGCTTCCACTTCTAGGGTGATAGTTTTCCCTGTGAGAGTC 1510564
Query 131218 TTTACGAAAATCTGCAT 131234
|| ||||| || |||||
Sbjct 1510563 TTCACGAAGATTTGCAT 1510547
Score = 89.7 bits (98), Expect = 5e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097
|| || || ||||||||||| ||||| || || | || || |||||||| |||
Sbjct 1510059 GTGGATTCTTTTTGAATGTTATAATCTGACAGTGTCCTTCCATCTTCGAGCTGCTTCCCT 1510000
Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157
|| ||||||| || |||||||| ||||||||||| |||||||| ||| ||| |||
Sbjct 1509999 GCAAAGATTAATCGTTGCTGGTCTGGAGGGATTCCCTCTTTGTCCTGGATCTTCGCCTTT 1509940
Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217
| | || | || || | | |||| || | || | |||||| || || || ||
Sbjct 1509939 ACATTTTCAATTGTGTCAGAAGCTTCGACTTCCAGAGTGATGGTTTTCCCTGTGAGTGTC 1509880
Query 131218 TTTACGAAAATCTGCAT 131234
|| ||||| || |||||
Sbjct 1509879 TTCACGAAGATTTGCAT 1509863
Score = 86.0 bits (94), Expect = 6e-12
Identities = 112/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139
|| || |||||||| ||||| ||||||| || |||||||| ||||||||||| ||||||
Sbjct 1515135 TCTTCGAGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGAGGGATTCCCTCTTTG 1515076
Query 131140 TCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACG 131199
|| ||| || ||| | | || | || || | | |||| || | ||| | |
Sbjct 1515075 TCCTGGATCTTTGCCTTTACATTTTCAATTGTGTCAGAAGCTTCGACTTCCAGGGTGATG 1515016
Query 131200 GTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
||||| || || ||||| || ||||| || |||||
Sbjct 1515015 GTTTTTCCTGTGAGAGTCTTGACGAAGATTTGCAT 1514981
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 471975829597440
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