Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19]
6,266 sequences; 272,660,569 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq467 93.3 3e-14
>seq467
Length=2555529
Score = 93.3 bits (102), Expect = 3e-14
Identities = 151/217 (70%), Gaps = 8/217 (4%)
Strand=Plus/Plus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
||||| | ||| || || ||||| || || ||||| ||||| | | || ||||||
Sbjct 1365219 AGTACAAGATGGAGTGTCGACTCTTTCTGAATGTTATAGTCAGATAATGT----GCGTCC 1365274
Query 16784 ----TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTT 16839
|||||||||||||| ||| |||| | || ||||||||| ||| | || |||||
Sbjct 1365275 ATCTTCCAATTGTTTGCCAGCAAAAATCAACCTCTGTTGGTCTGGAGGAATACCTTCTTT 1365334
Query 16840 GTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGAT 16899
||| ||||| ||| || | | | ||||| | ||| ||||| ||| ||
Sbjct 1365335 GTCCTGAATTTTAGCCTTTACATTCTCAATGGTGTCAGATGCCTCAACTTCCAAGGTTAT 1365394
Query 16900 GGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936
|||||||| || || ||||| || || |||||||||
Sbjct 1365395 AGTTTTTCCAGTAAGGGTTTTCACGAATATCTGCATT 1365431
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405057064695340
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |