Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19] 6,266 sequences; 272,660,569 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq467 93.3 3e-14 >seq467 Length=2555529 Score = 93.3 bits (102), Expect = 3e-14 Identities = 151/217 (70%), Gaps = 8/217 (4%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 ||||| | ||| || || ||||| || || ||||| ||||| | | || |||||| Sbjct 1365219 AGTACAAGATGGAGTGTCGACTCTTTCTGAATGTTATAGTCAGATAATGT----GCGTCC 1365274 Query 16784 ----TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTT 16839 |||||||||||||| ||| |||| | || ||||||||| ||| | || ||||| Sbjct 1365275 ATCTTCCAATTGTTTGCCAGCAAAAATCAACCTCTGTTGGTCTGGAGGAATACCTTCTTT 1365334 Query 16840 GTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGAT 16899 ||| ||||| ||| || | | | ||||| | ||| ||||| ||| || Sbjct 1365335 GTCCTGAATTTTAGCCTTTACATTCTCAATGGTGTCAGATGCCTCAACTTCCAAGGTTAT 1365394 Query 16900 GGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 |||||||| || || ||||| || || ||||||||| Sbjct 1365395 AGTTTTTCCAGTAAGGGTTTTCACGAATATCTGCATT 1365431 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405057064695340