Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19]
6,266 sequences; 272,660,569 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq453 91.5 3e-13
seq272 91.5 3e-13
seq202 91.5 3e-13
seq1651 89.7 1e-12
seq459 89.7 1e-12
seq152 87.8 4e-12
seq163 86.0 1e-11
>seq453
Length=4956680
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 4253924 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 4253865
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 4253864 CCCCACGTTGGGC 4253852
>seq272
Length=587202
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 367454 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 367513
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 367514 CCCCACGTTGGGC 367526
>seq202
Length=497029
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 352382 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 352441
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 352442 CCCCACGTTGGGC 352454
>seq1651
Length=1141625
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 1047640 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 1047699
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 1047700 CCCACGTTGGGC 1047711
>seq459
Length=558815
Score = 89.7 bits (98), Expect = 1e-12
Identities = 64/74 (86%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 142050 CATGTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCG 142109
|| ||| |||||||||| ||| ||||||||||||||||||||||||||| | |||||||
Sbjct 383356 CAAGTCCCTGTGGCGCAGAGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGTGGGTTCG 383415
Query 142110 ACCCCCGCCAGAGA 142123
| |||| |||| ||
Sbjct 383416 ATCCCCACCAGGGA 383429
>seq152
Length=1708397
Score = 87.8 bits (96), Expect = 4e-12
Identities = 62/71 (87%), Gaps = 0/71 (0%)
Strand=Plus/Plus
Query 142053 GTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACC 142112
||| || ||||||| ||| ||||||||||||||||||||||||||| |||||||||| |
Sbjct 720269 GTCCCTTTGGCGCAGAGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGCGGGTTCGATC 720328
Query 142113 CCCGCCAGAGA 142123
||||| || ||
Sbjct 720329 CCCGCAAGGGA 720339
>seq163
Length=1229113
Score = 86.0 bits (94), Expect = 1e-11
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560
|| |||||| |||||||||||||||||| |||||||||||| |||||||||||||
Sbjct 752541 ATTGCCCGGCTAGCTCAGTCGGTAGAGCATGGGACTCTTAATCTCAGGGTCGTGGGTTCG 752600
Query 142561 AGCCCCACATCGGGC 142575
|||||||| | ||||
Sbjct 752601 AGCCCCACGTTGGGC 752615
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027754282049706
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |