Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19]
6,266 sequences; 272,660,569 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq307 104 3e-17
seq129 102 9e-17
seq2434 98.7 1e-15
seq64 98.7 1e-15
seq467 96.9 4e-15
seq519 95.1 1e-14
seq61 95.1 1e-14
seq133 86.0 7e-12
>seq307
Length=2169461
Score = 104 bits (114), Expect = 3e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059
|||| ||| | |||| || |||||||| |||||||||| || |||| | | || ||
Sbjct 1515880 ACCAGATGAAGTGTGGATTCTTTTTGAATGTTGTAATCAGAGAGTGTCCTCCCATCTTCG 1515821
Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119
|||||||| || || || || | ||| ||||| || | || | | ||| |||||| |
Sbjct 1515820 AGCTGCTTTCCTGCAAAGATTAATCGTTGCTGATCTGGAGGTATTCCCTCTTTGTCCTGG 1515761
Query 42120 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 42179
|| || ||||| || | | ||||| | ||| || || | |||||||||||
Sbjct 1515760 ATCTTAGCTTTGACATTCTCTATTGTGTCAGAAGCTTCGACTTCCAGGGTGATGGTTTTT 1515701
Query 42180 CCCGTTAGCGTCTTTACAAAGATTTGCATT 42209
|| || || ||||| || ||||||||||||
Sbjct 1515700 CCTGTGAGAGTCTTGACGAAGATTTGCATT 1515671
Score = 91.5 bits (100), Expect = 2e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059
|||| ||| | |||| || |||||||| || ||||| | ||| |||| | || ||
Sbjct 1510755 ACCAGATGAAGTGTGGATTCTTTTTGAATGTTATAATCTGACAGTGTCCTTCCATCTTCG 1510696
Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119
|||||||| || || || || | ||| |||||||| | || | | || ||||| |
Sbjct 1510695 AGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGAGGAATTCCTTCTTTGTCTTGG 1510636
Query 42120 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 42179
|| || ||||| || | | ||||| | |||||| || | ||||| |||||
Sbjct 1510635 ATCTTAGCTTTGACATTCTCTATTGTGTCTGAGGCTTCCACTTCTAGGGTGATAGTTTTC 1510576
Query 42180 CCCGTTAGCGTCTTTACAAAGATTTGCATT 42209
|| || || ||||| || ||||||||||||
Sbjct 1510575 CCTGTGAGAGTCTTCACGAAGATTTGCATT 1510546
Score = 91.5 bits (100), Expect = 2e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041
||||||| | | ||| |||| ||| | |||| || |||||||| ||||||||||
Sbjct 1515442 CCTCCTCGAAGTCTCAAAACCAGATGAAGTGTGGATTCTTTTTGAATGTTGTAATCAGAG 1515383
Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101
|| |||| | || || || || || ||||| || || | ||| ||||| | | ||
Sbjct 1515382 AGTGTCCTTCCATCTTCAAGTTGTTTCCCAGCAAAGATTAATCGTTGCTGATGAGGGGGA 1515323
Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161
| | ||| |||||| ||| ||| || | | | | ||||| | ||| ||
Sbjct 1515322 ATTCCCTCTTTGTCCTGGATCTTTGCCTTTACATTTTCAATTGTGTCAGAAGCTTCGACT 1515263
Query 42162 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209
|| | ||||||||||| || || || ||||| |||||||||||||||
Sbjct 1515262 TCCAGAGTGATGGTTTTCCCTGTGAGTGTCTTGACAAAGATTTGCATT 1515215
Score = 91.5 bits (100), Expect = 2e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059
|||| ||| | ||| || |||||||| || ||||| | ||| |||| | | || ||
Sbjct 1515652 ACCAGATGAAGGGTGGATTCTTTTTGAATGTTATAATCTGACAGTGTCCTCCCATCTTCG 1515593
Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119
|||||||| || || || || | ||| |||||||| | || | | || ||||| |
Sbjct 1515592 AGCTGCTTTCCTGCAAAGATTAATCGTTGCTGGTCTGGAGGAATTCCTTCTTTGTCTTGG 1515533
Query 42120 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 42179
|| || ||||| || | | ||||| | |||||| || | ||||| |||||
Sbjct 1515532 ATCTTAGCTTTGACATTCTCTATTGTGTCTGAGGCTTCCACTTCTAGGGTGATAGTTTTC 1515473
Query 42180 CCCGTTAGCGTCTTTACAAAGATTTGCATT 42209
|| || || ||||| || ||||||||||||
Sbjct 1515472 CCTGTGAGAGTCTTCACGAAGATTTGCATT 1515443
Score = 86.0 bits (94), Expect = 7e-12
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059
|||| ||| | |||| || |||||||| || ||||| | ||| |||| | || ||
Sbjct 1510071 ACCAGATGAAGTGTGGATTCTTTTTGAATGTTATAATCTGACAGTGTCCTTCCATCTTCG 1510012
Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119
|||||||| || || || || | ||| |||||||| | || | | ||| |||||| |
Sbjct 1510011 AGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGAGGGATTCCCTCTTTGTCCTGG 1509952
Query 42120 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 42179
|| || || | | | | ||||| | ||| || || | |||||||||||
Sbjct 1509951 ATCTTCGCCTTTACATTTTCAATTGTGTCAGAAGCTTCGACTTCCAGAGTGATGGTTTTC 1509892
Query 42180 CCCGTTAGCGTCTTTACAAAGATTTGCATT 42209
|| || || ||||| || ||||||||||||
Sbjct 1509891 CCTGTGAGTGTCTTCACGAAGATTTGCATT 1509862
Score = 86.0 bits (94), Expect = 7e-12
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059
|||| ||| | |||| || |||||||| || ||||| | ||| |||| | || ||
Sbjct 1510299 ACCAGATGAAGTGTGGATTCTTTTTGAATGTTATAATCTGACAGTGTCCTTCCATCTTCG 1510240
Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119
|||||||| || || || || | ||| |||||||| | || | | ||| |||||| |
Sbjct 1510239 AGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGAGGGATTCCCTCTTTGTCCTGG 1510180
Query 42120 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 42179
|| || || | | | | ||||| | ||| || || | |||||||||||
Sbjct 1510179 ATCTTCGCCTTTACATTTTCAATTGTGTCAGAAGCTTCGACTTCCAGGGTGATGGTTTTT 1510120
Query 42180 CCCGTTAGCGTCTTTACAAAGATTTGCATT 42209
|| || || ||||| || ||||||||||||
Sbjct 1510119 CCTGTGAGAGTCTTGACGAAGATTTGCATT 1510090
Score = 86.0 bits (94), Expect = 7e-12
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059
|||| ||| | |||| || |||||||| || ||||| | ||| |||| | || ||
Sbjct 1510527 ACCAGATGAAGTGTGGATTCTTTTTGAATGTTATAATCTGACAGTGTCCTTCCATCTTCG 1510468
Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119
|||||||| || || || || | ||| |||||||| | || | | ||| |||||| |
Sbjct 1510467 AGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGAGGGATTCCCTCTTTGTCCTGG 1510408
Query 42120 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 42179
|| || || | | | | ||||| | ||| || || | |||||||||||
Sbjct 1510407 ATCTTCGCCTTTACATTTTCAATTGTGTCAGAAGCTTCGACTTCCAGGGTGATGGTTTTT 1510348
Query 42180 CCCGTTAGCGTCTTTACAAAGATTTGCATT 42209
|| || || ||||| || ||||||||||||
Sbjct 1510347 CCTGTGAGAGTCTTGACGAAGATTTGCATT 1510318
Score = 86.0 bits (94), Expect = 7e-12
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077
|| ||||||||||| ||||| | || |||| | || || |||||||| ||||| ||
Sbjct 1514715 TCTTTTTGAATATTATAATCTGAAAGTGTCCTTCCATCTTCCAGCTGCTTTCCAGCAAAG 1514656
Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137
|| | ||| ||||| || | || | | || || || ||| || ||||| ||
Sbjct 1514655 ATTAATCGTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGGATCTTAGCTTTGACATTC 1514596
Query 42138 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197
| | ||| || | ||| || || | ||||||||||| || || || ||||| |||
Sbjct 1514595 TCTATCGTATCTGAAGCTTCGACTTCCAGGGTGATGGTTTTCCCTGTGAGTGTCTTGACA 1514536
Query 42198 AAGATTTGCATT 42209
||||||||||||
Sbjct 1514535 AAGATTTGCATT 1514524
Score = 86.0 bits (94), Expect = 7e-12
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059
|||| ||| | |||| || |||||||| || ||||| | ||| |||| | || ||
Sbjct 1514961 ACCAGATGAAGTGTGGATTCTTTTTGAATGTTATAATCTGACAGTGTCCTTCCATCTTCG 1514902
Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119
|||||||| || || || || | ||| |||||||| | || | | ||| |||||| |
Sbjct 1514901 AGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGAGGGATTCCCTCTTTGTCCTGG 1514842
Query 42120 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 42179
|| || || | | | | ||||| | ||| || || | |||||||||||
Sbjct 1514841 ATCTTCGCCTTTACATTTTCAATTGTGTCAGAAGCTTCGACTTCCAGGGTGATGGTTTTT 1514782
Query 42180 CCCGTTAGCGTCTTTACAAAGATTTGCATT 42209
|| || || ||||| || ||||||||||||
Sbjct 1514781 CCTGTGAGAGTCTTGACGAAGATTTGCATT 1514752
>seq129
Length=5769472
Score = 102 bits (112), Expect = 9e-17
Identities = 90/112 (80%), Gaps = 4/112 (4%)
Strand=Plus/Minus
Query 56973 AGTTAACAACAAATTAACGTTT----ATGAAAAATTTTCTCCTCGGCAAGAAATCGAACC 57028
||||| ||| ||||| | ||| | ||||| | |||| |||| | |||||||||
Sbjct 2290249 AGTTATCAAAAAATTTAATTTTTAAAAATAAAAAAATCCTCCCCGGCGGGGAATCGAACC 2290190
Query 57029 CTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGATT 57080
| ||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct 2290189 CCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTATACTACCGAGGATT 2290138
>seq2434
Length=9448
Score = 98.7 bits (108), Expect = 1e-15
Identities = 73/84 (87%), Gaps = 1/84 (1%)
Strand=Plus/Minus
Query 56998 AAAAATTTTC-TCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 57056
|| |||| || ||| |||| | |||||||||| ||||||||||||||||||||| |||
Sbjct 5546 AATAATTATCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 5487
Query 57057 CTCACCACTATACTACCGAGGATT 57080
|| |||||||||||||||||||||
Sbjct 5486 CTGACCACTATACTACCGAGGATT 5463
>seq64
Length=822164
Score = 98.7 bits (108), Expect = 1e-15
Identities = 66/74 (89%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| |||| | |||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 388029 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 387970
Query 57067 TACTACCGAGGATT 57080
||||||||||||||
Sbjct 387969 TACTACCGAGGATT 387956
Score = 96.9 bits (106), Expect = 4e-15
Identities = 65/73 (89%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065
||||| |||| | |||||||||| ||||||||||||||||||||| ||||| ||||||
Sbjct 395339 TCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 395280
Query 57066 ATACTACCGAGGA 57078
|||||||||||||
Sbjct 395279 ATACTACCGAGGA 395267
>seq467
Length=2555529
Score = 96.9 bits (106), Expect = 4e-15
Identities = 136/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077
|||||||| |||||||| |||| || || || | || |||| || |||||||||||
Sbjct 1366380 TCCTTTTGTATATTGTAGTCAGAAAGTGTGCGTCCATCTTCTAATTGTTTACCAGCGAAG 1366439
Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137
|| | || |||||| || | ||| | || ||| || ||| ||||||| ||| | ||
Sbjct 1366440 ATCAATCTCTGCTGATCTGGTGGGATGCCCTCTTTATCCTGGATTTTTGCTTTAACATTC 1366499
Query 42138 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197
| | ||||| | || || |||| || |||||||| ||||| | ||||||||
Sbjct 1366500 TCGATGGTGTCTGATGCCTCAACCTCGAGGGTTATGGTTTTTCCCGTCAATGTCTTTACG 1366559
Query 42198 AAGATTTGCAT 42208
|| || |||||
Sbjct 1366560 AAAATCTGCAT 1366570
Score = 89.7 bits (98), Expect = 6e-13
Identities = 137/193 (71%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077
|| || |||||||||||||||| || || || | || || || || |||||||||||
Sbjct 1364195 TCTTTCTGAATATTGTAATCAGAAAGTGTACGACCATCTTCCAGTTGTTTACCAGCGAAG 1364254
Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 42136
|| | || |||||| || | ||| | || || |||| | ||| |||||| || | |
Sbjct 1364255 ATTAATCTCTGCTGATCTGGTGGAATGCCTTCTTTGT-CTTGAATTTTTGCCTTCACGTT 1364313
Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196
| | ||||| || || || || | || |||||||| || || || ||||| ||
Sbjct 1364314 TTCAATAGTGTCAGACGCCTCAACTTCCAGAGTTATGGTTTTTCCAGTAAGAGTCTTCAC 1364373
Query 42197 AAAGATTTGCATT 42209
||| |||||||||
Sbjct 1364374 AAAAATTTGCATT 1364386
>seq519
Length=14764
Score = 95.1 bits (104), Expect = 1e-14
Identities = 71/82 (87%), Gaps = 1/82 (1%)
Strand=Plus/Minus
Query 56998 AAAAATTTTC-TCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 57056
|| |||| || ||| |||| | |||||||||| ||||||||||||||||||||| |||
Sbjct 582 AATAATTATCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 523
Query 57057 CTCACCACTATACTACCGAGGA 57078
|| |||||||||||||||||||
Sbjct 522 CTGACCACTATACTACCGAGGA 501
>seq61
Length=1771752
Score = 95.1 bits (104), Expect = 1e-14
Identities = 66/75 (88%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| |||| | |||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 510156 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 510097
Query 57067 TACTACCGAGGATTG 57081
|||||||||||| ||
Sbjct 510096 TACTACCGAGGAATG 510082
Score = 86.0 bits (94), Expect = 7e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 510998 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 510939
Query 57067 TACTACCGAGGA 57078
||||| ||||||
Sbjct 510938 TACTATCGAGGA 510927
>seq133
Length=1601264
Score = 86.0 bits (94), Expect = 7e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 293275 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 293216
Query 57067 TACTACCGAGGA 57078
||||| ||||||
Sbjct 293215 TACTATCGAGGA 293204
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543170252857440
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