Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19]
6,266 sequences; 272,660,569 total letters
Query= NC_011335.1
Length=119343
Score E
Sequences producing significant alignments: (Bits) Value
seq235 84.2 2e-11
>seq235
Length=895531
Score = 84.2 bits (92), Expect = 2e-11
Identities = 107/142 (75%), Gaps = 4/142 (3%)
Strand=Plus/Plus
Query 118161 ATACACTCCGACAGTTT-TCCGTCGCGACCGGCCCTTCCTATCTCTTGATAATAACCGTC 118219
||||| |||| || ||| |||||||||||| || | ||| |||||||||| ||||| ||
Sbjct 887111 ATACAGTCCG-CATTTTCTCCGTCGCGACCAGCACGTCCACTCTCTTGATAGTAACCTTC 887169
Query 118220 CAGTGATTTGGGCATA-CTGTGATGTATCACCAACCGCACGTCGGGTTTATCGATGCCCA 118278
| ||||| || | | ||| | || || || || || || | ||||| || || ||||
Sbjct 887170 GATAGATTTCGGAAGAGCTGCG-TGAATTACAAAGCGTACATTTGGTTTGTCAATACCCA 887228
Query 118279 TCCCGAACGCTATCGTCGAACA 118300
| || |||||||| |||| |||
Sbjct 887229 TTCCAAACGCTATTGTCGCACA 887250
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381743645204304
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |