Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19] 6,266 sequences; 272,660,569 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq235 84.2 2e-11 >seq235 Length=895531 Score = 84.2 bits (92), Expect = 2e-11 Identities = 107/142 (75%), Gaps = 4/142 (3%) Strand=Plus/Plus Query 118161 ATACACTCCGACAGTTT-TCCGTCGCGACCGGCCCTTCCTATCTCTTGATAATAACCGTC 118219 ||||| |||| || ||| |||||||||||| || | ||| |||||||||| ||||| || Sbjct 887111 ATACAGTCCG-CATTTTCTCCGTCGCGACCAGCACGTCCACTCTCTTGATAGTAACCTTC 887169 Query 118220 CAGTGATTTGGGCATA-CTGTGATGTATCACCAACCGCACGTCGGGTTTATCGATGCCCA 118278 | ||||| || | | ||| | || || || || || || | ||||| || || |||| Sbjct 887170 GATAGATTTCGGAAGAGCTGCG-TGAATTACAAAGCGTACATTTGGTTTGTCAATACCCA 887228 Query 118279 TCCCGAACGCTATCGTCGAACA 118300 | || |||||||| |||| ||| Sbjct 887229 TTCCAAACGCTATTGTCGCACA 887250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381743645204304