Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19]
6,266 sequences; 272,660,569 total letters
Query= NC_011423.1
Length=111724
Score E
Sequences producing significant alignments: (Bits) Value
seq307 111 1e-19
seq467 105 5e-18
seq321 104 2e-17
>seq307
Length=2169461
Score = 111 bits (122), Expect = 1e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
|| ||||| | ||| ||||| | |||||| || || |||||||| ||||||||||| |
Sbjct 1515442 CCTCCTCGAAGTCTCAAAACCAGATGAAGTGTGGATTCTTTTTGAATGTTGTAATCAGAG 1515383
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
|| | || | ||||| | |||||| ||||| | || || || || || | |||
Sbjct 1515382 AGTGTCCTTCCATCTTCAAGTTGTTTCCCAGCAAAGATTAATCGTTGCTGATGAGGGGGA 1515323
Query 15070 ATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128
||||| || ||||| || ||||| |||||| |||| || || || | ||| ||
Sbjct 1515322 ATTCCCTCTTTGTCCTGGATCTTTGC-CTTTACATTTTCAATTGTGTCAGAAGCTTCGAC 1515264
Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
|| | || |||||||| ||||| || || || ||||| ||||||||
Sbjct 1515263 TTCCAGAGTGATGGTTTTCCCTGTGAGTGTCTTGACAAAGATTTGCAT 1515216
Score = 107 bits (118), Expect = 1e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
|| ||||| | ||||| ||| | ||||||||| || |||||||| ||||| |||||
Sbjct 1515670 CCTCCTCGAAGTCTTAGAACCAGATGAAGGGTGGATTCTTTTTGAATGTTATAATCTGAC 1515611
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
|| | ||| | ||||| | || || || || | || || || || ||||| |||
Sbjct 1515610 AGTGTCCTCCCATCTTCGAGCTGCTTTCCTGCAAAGATTAATCGTTGCTGGTCTGGAGGA 1515551
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
|||||||| ||||| || || ||| ||| | ||||| || || ||| ||
Sbjct 1515550 ATTCCTTCTTTGTCTTGGATCTTAGCTTTGACATTCTCTATTGTGTCTGAGGCTTCCACT 1515491
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
|||| ||| || ||||| ||||| ||||| || || || ||||||||
Sbjct 1515490 TCTAGGGTGATAGTTTTCCCTGTGAGAGTCTTCACGAAGATTTGCAT 1515444
Score = 98.7 bits (108), Expect = 7e-16
Identities = 162/234 (69%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
|| ||||| | ||||| ||| | |||||| || || |||||||| ||||| |||||
Sbjct 1509861 CCTCCTCGAAGTCTTAGAACCAGATGAAGTGTGGATTCTTTTTGAATGTTATAATCTGAC 1509802
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
|| | || | ||||| | || || || || | || || || || ||||| ||
Sbjct 1509801 AGTGTCCTTCCATCTTCGAGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGAGGG 1509742
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
||||| || ||||| || || || ||| | ||||| ||||| | ||| ||
Sbjct 1509741 ATTCCCTCTTTGTCCTGGATCTTCGCCTTGACATTCTCTATCGTATCTGAAGCTTCGACT 1509682
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGAA 15183
|| | ||| ||||| || ||||| || || || ||||| || ||||||||||||
Sbjct 1509681 TCCAGGGTGATGGTCTTCCCTGTAAGTGTCTTGACAAAGATCTGCATATTTGAA 1509628
Score = 98.7 bits (108), Expect = 7e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
|| ||||| | ||||| ||| | |||||| || || |||||||| ||||| |||||
Sbjct 1510773 CCTCCTCGAAGTCTTAGAACCAGATGAAGTGTGGATTCTTTTTGAATGTTATAATCTGAC 1510714
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
|| | || | ||||| | || || || || | || || || || ||||| |||
Sbjct 1510713 AGTGTCCTTCCATCTTCGAGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGAGGA 1510654
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
|||||||| ||||| || || ||| ||| | ||||| || || ||| ||
Sbjct 1510653 ATTCCTTCTTTGTCTTGGATCTTAGCTTTGACATTCTCTATTGTGTCTGAGGCTTCCACT 1510594
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
|||| ||| || ||||| ||||| ||||| || || || ||||||||
Sbjct 1510593 TCTAGGGTGATAGTTTTCCCTGTGAGAGTCTTCACGAAGATTTGCAT 1510547
Score = 95.1 bits (104), Expect = 9e-15
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
|| || || | ||| | ||| | |||||| || || |||||||| ||||||||||| |
Sbjct 1515898 CCTCCCCGAAGTCTCAGAACCAGATGAAGTGTGGATTCTTTTTGAATGTTGTAATCAGAG 1515839
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
|| | ||| | ||||| | || || || || | || || || || || || ||
Sbjct 1515838 AGTGTCCTCCCATCTTCGAGCTGCTTTCCTGCAAAGATTAATCGTTGCTGATCTGGAGGT 1515779
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
||||| || ||||| || || ||| ||| | ||||| || || | ||| ||
Sbjct 1515778 ATTCCCTCTTTGTCCTGGATCTTAGCTTTGACATTCTCTATTGTGTCAGAAGCTTCGACT 1515719
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
|| | ||| |||||||| ||||| ||||| || || || ||||||||
Sbjct 1515718 TCCAGGGTGATGGTTTTTCCTGTGAGAGTCTTGACGAAGATTTGCAT 1515672
Score = 86.0 bits (94), Expect = 4e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
|| ||||| | ||| | || | ||||| || || |||||||| || || |||||
Sbjct 1514751 CCTCCTCGAAGTCTCAGCACAAGGTGAAGTGTTGATTCTTTTTGAATATTATAATCTGAA 1514692
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
|| | || | ||||| | || || ||||| | || || || || || || |||
Sbjct 1514691 AGTGTCCTTCCATCTTCCAGCTGCTTTCCAGCAAAGATTAATCGTTGCTGATCAGGAGGA 1514632
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
|||||||| || || || || ||| ||| | ||||| ||||| | ||| ||
Sbjct 1514631 ATTCCTTCTTTATCTTGGATCTTAGCTTTGACATTCTCTATCGTATCTGAAGCTTCGACT 1514572
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
|| | ||| |||||||| ||||| || || || ||||| ||||||||
Sbjct 1514571 TCCAGGGTGATGGTTTTCCCTGTGAGTGTCTTGACAAAGATTTGCAT 1514525
>seq467
Length=2555529
Score = 105 bits (116), Expect = 5e-18
Identities = 148/206 (72%), Gaps = 4/206 (2%)
Strand=Plus/Plus
Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CGTCTTCTAAT 15030
||||||||| || |||||||| || ||||||||| || || || | |||||||||
Sbjct 1365911 ATGAAGGGTTGATTCTTTTTGAATATTGTAATCG--GATAACGTGCGTCCATCTTCTAAT 1365968
Query 15031 TGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATT 15090
||||| ||||| | ||||| | ||||| || ||||| ||||| ||||| ||||
Sbjct 1365969 TGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGAGGAATACCTTCTTTGTCCTGAATT 1366028
Query 15091 TTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCT 15150
||| ||| ||| |||| || ||||| ||| || || | || ||||| || ||
Sbjct 1366029 TTGGCTTTAACATTTTCAATTGTATCTGATGCTTCCACTTCGAGAGTGATGGTCTTTCCA 1366088
Query 15151 GTCAGAGTTTTTACAAAAATTTGCAT 15176
|||| || ||||| || || |||||
Sbjct 1366089 GTCAATGTCTTTACGAAGATCTGCAT 1366114
Score = 98.7 bits (108), Expect = 7e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027
|||||||| || ||||| ||||| || || |||||||| || | | | |||||
Sbjct 1364177 ACTAAATGGAGAGTAGATTCTTTCTGAATATTGTAATCAGAAAGTGTACGACCATCTTCC 1364236
Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087
| |||||| |||||| | || || | ||| || || |||||| ||||| ||||| |
Sbjct 1364237 AGTTGTTTACCAGCGAAGATTAATCTCTGCTGATCTGGTGGAATGCCTTCTTTGTCTTGA 1364296
Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147
||||| || || |||| ||||| || || || || | || ||||||||
Sbjct 1364297 ATTTTTGCCTTCACGTTTTCAATAGTGTCAGACGCCTCAACTTCCAGAGTTATGGTTTTT 1364356
Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
|| || ||||| || ||||||||||||||
Sbjct 1364357 CCAGTAAGAGTCTTCACAAAAATTTGCAT 1364385
Score = 96.9 bits (106), Expect = 2e-15
Identities = 146/206 (71%), Gaps = 4/206 (2%)
Strand=Plus/Plus
Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CGTCTTCTAAT 15030
||||||||| || |||||||| || ||||||||| || || || | |||||||||
Sbjct 1364638 ATGAAGGGTTGATTCTTTTTGAATATTGTAATCG--GATAACGTGCGTCCATCTTCTAAT 1364695
Query 15031 TGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATT 15090
||||| ||||| | ||||| | ||||| || ||||| ||||| ||||| ||||
Sbjct 1364696 TGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGAGGAATACCTTCTTTGTCCTGAATT 1364755
Query 15091 TTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCT 15150
|| |||||| | || || || || || || || ||||| || ||||| ||
Sbjct 1364756 TTAGCCTTTACATTCTCAATGGTGTCAGATGCCTCAACTTCCAAGGTTATAGTTTTTCCA 1364815
Query 15151 GTCAGAGTTTTTACAAAAATTTGCAT 15176
|| || ||||| || || || |||||
Sbjct 1364816 GTAAGGGTTTTCACGAATATCTGCAT 1364841
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026
||| | ||||||||| || |||||||| || || ||||| || | | | |||||
Sbjct 1365677 AACGAGATGAAGGGTTGATTCTTTTTGGATATTATAATCAGAAAGTGTACGTCCATCTTC 1365736
Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086
||||| |||||||| | || || | ||| ||||| || || |||||||||||
Sbjct 1365737 CAATTGCTTGCCAGCAAAGATTAATCTCTGCTGGTCTGGAGGGATACCTTCCTTGTCCTG 1365796
Query 15087 AATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTT 15146
||||| ||| || |||| || |||||| || || || || || || |||||
Sbjct 1365797 GATTTTAGCTTTCACGTTTTCAATGGTATCGGACGCCTCAACTTCCAATGTTATTGTTTT 1365856
Query 15147 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
|| || || |||||||| || || |||||
Sbjct 1365857 TCCAGTAAGTGTTTTTACGAAGATCTGCAT 1365886
Score = 87.8 bits (96), Expect = 1e-12
Identities = 144/206 (70%), Gaps = 4/206 (2%)
Strand=Plus/Plus
Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CGTCTTCTAAT 15030
||| || || || ||||| || ||||| || || || ||| || | ||||| |||
Sbjct 1365227 ATGGAGTGTCGACTCTTTCTGAATGTTATAGTCA--GATAATGTGCGTCCATCTTCCAAT 1365284
Query 15031 TGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATT 15090
||||||||||| | ||||| | ||||||||| ||||| ||||| ||||| ||||
Sbjct 1365285 TGTTTGCCAGCAAAAATCAACCTCTGTTGGTCTGGAGGAATACCTTCTTTGTCCTGAATT 1365344
Query 15091 TTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCT 15150
|| |||||| | || || || || || || || ||||| || ||||| ||
Sbjct 1365345 TTAGCCTTTACATTCTCAATGGTGTCAGATGCCTCAACTTCCAAGGTTATAGTTTTTCCA 1365404
Query 15151 GTCAGAGTTTTTACAAAAATTTGCAT 15176
|| || ||||| || || || |||||
Sbjct 1365405 GTAAGGGTTTTCACGAATATCTGCAT 1365430
Score = 86.0 bits (94), Expect = 4e-12
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026
||| | ||||||||| || |||||||| || || ||||| || | | | |||||
Sbjct 1365449 AACGAGATGAAGGGTTGATTCTTTTTGGATATTATAATCAGAAAGTGTACGTCCATCTTC 1365508
Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086
||||| |||||||| | || || | ||| ||||| || || |||||||||||
Sbjct 1365509 CAATTGCTTGCCAGCAAAGATTAATCTCTGCTGGTCTGGAGGGATACCTTCCTTGTCCTG 1365568
Query 15087 AATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTT 15146
||||| ||| ||| |||| || || || || || || ||||| || |||||
Sbjct 1365569 GATTTTAGCTTTCACATTTTCAATGGTGTCTGACGCCTCAACTTCCAAGGTTATAGTTTT 1365628
Query 15147 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
|| || || ||||| || || || |||||
Sbjct 1365629 TCCAGTAAGGGTTTTCACGAATATCTGCAT 1365658
Score = 86.0 bits (94), Expect = 4e-12
Identities = 143/205 (70%), Gaps = 4/205 (2%)
Strand=Plus/Plus
Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CGTCTTCTAATT 15031
||||| ||||| || ||||| || ||||| || || ||| || | ||||| ||||
Sbjct 1366140 TGAAGAGTAGATTCCTTTTGAATATTGTAGTCA--GATAATGTGCGTCCATCTTCCAATT 1366197
Query 15032 GTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTT 15091
||||||||||| | |||| | |||||||| ||||| || || || || |||||
Sbjct 1366198 GTTTGCCAGCGAAGATCAGTCTTTGTTGGTCTGGAGGAATACCCTCTTTATCCTGAATTT 1366257
Query 15092 TGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTG 15151
| ||| ||| |||| ||||| || ||| || || | || ||||| || || |
Sbjct 1366258 TAGCTTTAACATTTTCAATAGTGTCTGAGGCTTCAACTTCAAGAGTGATGGTCTTTCCAG 1366317
Query 15152 TCAGAGTTTTTACAAAAATTTGCAT 15176
||| || ||||| || || |||||
Sbjct 1366318 TCAATGTCTTTACGAAGATCTGCAT 1366342
Score = 82.4 bits (90), Expect = 5e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033
||||| ||||| || |||||||| ||||| || || | | | ||||||||||||
Sbjct 1366368 TGAAGTGTAGATTCCTTTTGTATATTGTAGTCAGAAAGTGTGCGTCCATCTTCTAATTGT 1366427
Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093
|| |||||| | ||||| | ||| || || ||| || || || || || |||||
Sbjct 1366428 TTACCAGCGAAGATCAATCTCTGCTGATCTGGTGGGATGCCCTCTTTATCCTGGATTTTT 1366487
Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153
||| ||| | || || || || || || || | ||| |||||||| || |||
Sbjct 1366488 GCTTTAACATTCTCGATGGTGTCTGATGCCTCAACCTCGAGGGTTATGGTTTTTCCCGTC 1366547
Query 15154 AGAGTTTTTACAAAAATTTGCAT 15176
| || ||||| ||||| |||||
Sbjct 1366548 AATGTCTTTACGAAAATCTGCAT 1366570
>seq321
Length=1097274
Score = 104 bits (114), Expect = 2e-17
Identities = 116/155 (75%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 15022 TCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTG 15081
|||||||||||||| |||||| | || | ||||||||| || |||||||||||| ||
Sbjct 785306 TCTTCTAATTGTTTTCCAGCGAAAATTAGACGCTGTTGATCAGGTGGAATTCCTTCTTTA 785365
Query 15082 TCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATG 15141
|| |||||| ||||||| |||| || ||||| |||||| || | || ||
Sbjct 785366 TCTTGAATTTTAGCTTTTACATTTTCGATGGTATCAGACGCTTCTACCTCGAGCGTGATA 785425
Query 15142 GTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
||||| || |||| |||||| || || || |||||
Sbjct 785426 GTTTTGCCCGTCAAAGTTTTCACGAATATCTGCAT 785460
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 357364707089810
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