Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19] 6,266 sequences; 272,660,569 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq307 111 1e-19 seq467 105 5e-18 seq321 104 2e-17 >seq307 Length=2169461 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || ||||| | ||| ||||| | |||||| || || |||||||| ||||||||||| | Sbjct 1515442 CCTCCTCGAAGTCTCAAAACCAGATGAAGTGTGGATTCTTTTTGAATGTTGTAATCAGAG 1515383 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | || | ||||| | |||||| ||||| | || || || || || | ||| Sbjct 1515382 AGTGTCCTTCCATCTTCAAGTTGTTTCCCAGCAAAGATTAATCGTTGCTGATGAGGGGGA 1515323 Query 15070 ATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128 ||||| || ||||| || ||||| |||||| |||| || || || | ||| || Sbjct 1515322 ATTCCCTCTTTGTCCTGGATCTTTGC-CTTTACATTTTCAATTGTGTCAGAAGCTTCGAC 1515264 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || | || |||||||| ||||| || || || ||||| |||||||| Sbjct 1515263 TTCCAGAGTGATGGTTTTCCCTGTGAGTGTCTTGACAAAGATTTGCAT 1515216 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || ||||| | ||||| ||| | ||||||||| || |||||||| ||||| ||||| Sbjct 1515670 CCTCCTCGAAGTCTTAGAACCAGATGAAGGGTGGATTCTTTTTGAATGTTATAATCTGAC 1515611 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | ||| | ||||| | || || || || | || || || || ||||| ||| Sbjct 1515610 AGTGTCCTCCCATCTTCGAGCTGCTTTCCTGCAAAGATTAATCGTTGCTGGTCTGGAGGA 1515551 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 |||||||| ||||| || || ||| ||| | ||||| || || ||| || Sbjct 1515550 ATTCCTTCTTTGTCTTGGATCTTAGCTTTGACATTCTCTATTGTGTCTGAGGCTTCCACT 1515491 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 |||| ||| || ||||| ||||| ||||| || || || |||||||| Sbjct 1515490 TCTAGGGTGATAGTTTTCCCTGTGAGAGTCTTCACGAAGATTTGCAT 1515444 Score = 98.7 bits (108), Expect = 7e-16 Identities = 162/234 (69%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || ||||| | ||||| ||| | |||||| || || |||||||| ||||| ||||| Sbjct 1509861 CCTCCTCGAAGTCTTAGAACCAGATGAAGTGTGGATTCTTTTTGAATGTTATAATCTGAC 1509802 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | || | ||||| | || || || || | || || || || ||||| || Sbjct 1509801 AGTGTCCTTCCATCTTCGAGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGAGGG 1509742 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 ||||| || ||||| || || || ||| | ||||| ||||| | ||| || Sbjct 1509741 ATTCCCTCTTTGTCCTGGATCTTCGCCTTGACATTCTCTATCGTATCTGAAGCTTCGACT 1509682 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGAA 15183 || | ||| ||||| || ||||| || || || ||||| || |||||||||||| Sbjct 1509681 TCCAGGGTGATGGTCTTCCCTGTAAGTGTCTTGACAAAGATCTGCATATTTGAA 1509628 Score = 98.7 bits (108), Expect = 7e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || ||||| | ||||| ||| | |||||| || || |||||||| ||||| ||||| Sbjct 1510773 CCTCCTCGAAGTCTTAGAACCAGATGAAGTGTGGATTCTTTTTGAATGTTATAATCTGAC 1510714 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | || | ||||| | || || || || | || || || || ||||| ||| Sbjct 1510713 AGTGTCCTTCCATCTTCGAGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGAGGA 1510654 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 |||||||| ||||| || || ||| ||| | ||||| || || ||| || Sbjct 1510653 ATTCCTTCTTTGTCTTGGATCTTAGCTTTGACATTCTCTATTGTGTCTGAGGCTTCCACT 1510594 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 |||| ||| || ||||| ||||| ||||| || || || |||||||| Sbjct 1510593 TCTAGGGTGATAGTTTTCCCTGTGAGAGTCTTCACGAAGATTTGCAT 1510547 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || || || | ||| | ||| | |||||| || || |||||||| ||||||||||| | Sbjct 1515898 CCTCCCCGAAGTCTCAGAACCAGATGAAGTGTGGATTCTTTTTGAATGTTGTAATCAGAG 1515839 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | ||| | ||||| | || || || || | || || || || || || || Sbjct 1515838 AGTGTCCTCCCATCTTCGAGCTGCTTTCCTGCAAAGATTAATCGTTGCTGATCTGGAGGT 1515779 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 ||||| || ||||| || || ||| ||| | ||||| || || | ||| || Sbjct 1515778 ATTCCCTCTTTGTCCTGGATCTTAGCTTTGACATTCTCTATTGTGTCAGAAGCTTCGACT 1515719 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || | ||| |||||||| ||||| ||||| || || || |||||||| Sbjct 1515718 TCCAGGGTGATGGTTTTTCCTGTGAGAGTCTTGACGAAGATTTGCAT 1515672 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || ||||| | ||| | || | ||||| || || |||||||| || || ||||| Sbjct 1514751 CCTCCTCGAAGTCTCAGCACAAGGTGAAGTGTTGATTCTTTTTGAATATTATAATCTGAA 1514692 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | || | ||||| | || || ||||| | || || || || || || ||| Sbjct 1514691 AGTGTCCTTCCATCTTCCAGCTGCTTTCCAGCAAAGATTAATCGTTGCTGATCAGGAGGA 1514632 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 |||||||| || || || || ||| ||| | ||||| ||||| | ||| || Sbjct 1514631 ATTCCTTCTTTATCTTGGATCTTAGCTTTGACATTCTCTATCGTATCTGAAGCTTCGACT 1514572 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || | ||| |||||||| ||||| || || || ||||| |||||||| Sbjct 1514571 TCCAGGGTGATGGTTTTCCCTGTGAGTGTCTTGACAAAGATTTGCAT 1514525 >seq467 Length=2555529 Score = 105 bits (116), Expect = 5e-18 Identities = 148/206 (72%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CGTCTTCTAAT 15030 ||||||||| || |||||||| || ||||||||| || || || | ||||||||| Sbjct 1365911 ATGAAGGGTTGATTCTTTTTGAATATTGTAATCG--GATAACGTGCGTCCATCTTCTAAT 1365968 Query 15031 TGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATT 15090 ||||| ||||| | ||||| | ||||| || ||||| ||||| ||||| |||| Sbjct 1365969 TGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGAGGAATACCTTCTTTGTCCTGAATT 1366028 Query 15091 TTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCT 15150 ||| ||| ||| |||| || ||||| ||| || || | || ||||| || || Sbjct 1366029 TTGGCTTTAACATTTTCAATTGTATCTGATGCTTCCACTTCGAGAGTGATGGTCTTTCCA 1366088 Query 15151 GTCAGAGTTTTTACAAAAATTTGCAT 15176 |||| || ||||| || || ||||| Sbjct 1366089 GTCAATGTCTTTACGAAGATCTGCAT 1366114 Score = 98.7 bits (108), Expect = 7e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 |||||||| || ||||| ||||| || || |||||||| || | | | ||||| Sbjct 1364177 ACTAAATGGAGAGTAGATTCTTTCTGAATATTGTAATCAGAAAGTGTACGACCATCTTCC 1364236 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 | |||||| |||||| | || || | ||| || || |||||| ||||| ||||| | Sbjct 1364237 AGTTGTTTACCAGCGAAGATTAATCTCTGCTGATCTGGTGGAATGCCTTCTTTGTCTTGA 1364296 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 ||||| || || |||| ||||| || || || || | || |||||||| Sbjct 1364297 ATTTTTGCCTTCACGTTTTCAATAGTGTCAGACGCCTCAACTTCCAGAGTTATGGTTTTT 1364356 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || ||||| || |||||||||||||| Sbjct 1364357 CCAGTAAGAGTCTTCACAAAAATTTGCAT 1364385 Score = 96.9 bits (106), Expect = 2e-15 Identities = 146/206 (71%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CGTCTTCTAAT 15030 ||||||||| || |||||||| || ||||||||| || || || | ||||||||| Sbjct 1364638 ATGAAGGGTTGATTCTTTTTGAATATTGTAATCG--GATAACGTGCGTCCATCTTCTAAT 1364695 Query 15031 TGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATT 15090 ||||| ||||| | ||||| | ||||| || ||||| ||||| ||||| |||| Sbjct 1364696 TGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGAGGAATACCTTCTTTGTCCTGAATT 1364755 Query 15091 TTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCT 15150 || |||||| | || || || || || || || ||||| || ||||| || Sbjct 1364756 TTAGCCTTTACATTCTCAATGGTGTCAGATGCCTCAACTTCCAAGGTTATAGTTTTTCCA 1364815 Query 15151 GTCAGAGTTTTTACAAAAATTTGCAT 15176 || || ||||| || || || ||||| Sbjct 1364816 GTAAGGGTTTTCACGAATATCTGCAT 1364841 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026 ||| | ||||||||| || |||||||| || || ||||| || | | | ||||| Sbjct 1365677 AACGAGATGAAGGGTTGATTCTTTTTGGATATTATAATCAGAAAGTGTACGTCCATCTTC 1365736 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086 ||||| |||||||| | || || | ||| ||||| || || ||||||||||| Sbjct 1365737 CAATTGCTTGCCAGCAAAGATTAATCTCTGCTGGTCTGGAGGGATACCTTCCTTGTCCTG 1365796 Query 15087 AATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTT 15146 ||||| ||| || |||| || |||||| || || || || || || ||||| Sbjct 1365797 GATTTTAGCTTTCACGTTTTCAATGGTATCGGACGCCTCAACTTCCAATGTTATTGTTTT 1365856 Query 15147 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || || |||||||| || || ||||| Sbjct 1365857 TCCAGTAAGTGTTTTTACGAAGATCTGCAT 1365886 Score = 87.8 bits (96), Expect = 1e-12 Identities = 144/206 (70%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CGTCTTCTAAT 15030 ||| || || || ||||| || ||||| || || || ||| || | ||||| ||| Sbjct 1365227 ATGGAGTGTCGACTCTTTCTGAATGTTATAGTCA--GATAATGTGCGTCCATCTTCCAAT 1365284 Query 15031 TGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATT 15090 ||||||||||| | ||||| | ||||||||| ||||| ||||| ||||| |||| Sbjct 1365285 TGTTTGCCAGCAAAAATCAACCTCTGTTGGTCTGGAGGAATACCTTCTTTGTCCTGAATT 1365344 Query 15091 TTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCT 15150 || |||||| | || || || || || || || ||||| || ||||| || Sbjct 1365345 TTAGCCTTTACATTCTCAATGGTGTCAGATGCCTCAACTTCCAAGGTTATAGTTTTTCCA 1365404 Query 15151 GTCAGAGTTTTTACAAAAATTTGCAT 15176 || || ||||| || || || ||||| Sbjct 1365405 GTAAGGGTTTTCACGAATATCTGCAT 1365430 Score = 86.0 bits (94), Expect = 4e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026 ||| | ||||||||| || |||||||| || || ||||| || | | | ||||| Sbjct 1365449 AACGAGATGAAGGGTTGATTCTTTTTGGATATTATAATCAGAAAGTGTACGTCCATCTTC 1365508 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086 ||||| |||||||| | || || | ||| ||||| || || ||||||||||| Sbjct 1365509 CAATTGCTTGCCAGCAAAGATTAATCTCTGCTGGTCTGGAGGGATACCTTCCTTGTCCTG 1365568 Query 15087 AATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTT 15146 ||||| ||| ||| |||| || || || || || || ||||| || ||||| Sbjct 1365569 GATTTTAGCTTTCACATTTTCAATGGTGTCTGACGCCTCAACTTCCAAGGTTATAGTTTT 1365628 Query 15147 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || || ||||| || || || ||||| Sbjct 1365629 TCCAGTAAGGGTTTTCACGAATATCTGCAT 1365658 Score = 86.0 bits (94), Expect = 4e-12 Identities = 143/205 (70%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CGTCTTCTAATT 15031 ||||| ||||| || ||||| || ||||| || || ||| || | ||||| |||| Sbjct 1366140 TGAAGAGTAGATTCCTTTTGAATATTGTAGTCA--GATAATGTGCGTCCATCTTCCAATT 1366197 Query 15032 GTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTT 15091 ||||||||||| | |||| | |||||||| ||||| || || || || ||||| Sbjct 1366198 GTTTGCCAGCGAAGATCAGTCTTTGTTGGTCTGGAGGAATACCCTCTTTATCCTGAATTT 1366257 Query 15092 TGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTG 15151 | ||| ||| |||| ||||| || ||| || || | || ||||| || || | Sbjct 1366258 TAGCTTTAACATTTTCAATAGTGTCTGAGGCTTCAACTTCAAGAGTGATGGTCTTTCCAG 1366317 Query 15152 TCAGAGTTTTTACAAAAATTTGCAT 15176 ||| || ||||| || || ||||| Sbjct 1366318 TCAATGTCTTTACGAAGATCTGCAT 1366342 Score = 82.4 bits (90), Expect = 5e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 ||||| ||||| || |||||||| ||||| || || | | | |||||||||||| Sbjct 1366368 TGAAGTGTAGATTCCTTTTGTATATTGTAGTCAGAAAGTGTGCGTCCATCTTCTAATTGT 1366427 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 || |||||| | ||||| | ||| || || ||| || || || || || ||||| Sbjct 1366428 TTACCAGCGAAGATCAATCTCTGCTGATCTGGTGGGATGCCCTCTTTATCCTGGATTTTT 1366487 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 ||| ||| | || || || || || || || | ||| |||||||| || ||| Sbjct 1366488 GCTTTAACATTCTCGATGGTGTCTGATGCCTCAACCTCGAGGGTTATGGTTTTTCCCGTC 1366547 Query 15154 AGAGTTTTTACAAAAATTTGCAT 15176 | || ||||| ||||| ||||| Sbjct 1366548 AATGTCTTTACGAAAATCTGCAT 1366570 >seq321 Length=1097274 Score = 104 bits (114), Expect = 2e-17 Identities = 116/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 15022 TCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTG 15081 |||||||||||||| |||||| | || | ||||||||| || |||||||||||| || Sbjct 785306 TCTTCTAATTGTTTTCCAGCGAAAATTAGACGCTGTTGATCAGGTGGAATTCCTTCTTTA 785365 Query 15082 TCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATG 15141 || |||||| ||||||| |||| || ||||| |||||| || | || || Sbjct 785366 TCTTGAATTTTAGCTTTTACATTTTCGATGGTATCAGACGCTTCTACCTCGAGCGTGATA 785425 Query 15142 GTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 ||||| || |||| |||||| || || || ||||| Sbjct 785426 GTTTTGCCCGTCAAAGTTTTCACGAATATCTGCAT 785460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357364707089810