Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19]
6,266 sequences; 272,660,569 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq467 125 7e-24
seq307 105 6e-18
>seq467
Length=2555529
Score = 125 bits (138), Expect = 7e-24
Identities = 155/208 (75%), Gaps = 3/208 (1%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
||||| || ||||| |||||||| || | ||||| ||| |||| ||||| |||
Sbjct 1366374 GTAGATTCCTTTTGTATATTGTAGTCAGAAAGTGTGCGTCCATCTTCTAATTGTTTACCA 1366433
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
||| ||||||||| ||||||||| || || |||||||| || ||| |||||| |||||
Sbjct 1366434 GCGAAGATCAATCTCTGCTGATCTGGTGGGATGCCCTCTTTATCCTGGATTTT-TGCTTT 1366492
Query 127037 AGTTGT-TCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095
| | |||| |||||| | ||| || |||| ||| | ||||| || |||| ||
Sbjct 1366493 AACATTCTCGATGGTGTCTGATGCCTCAACCTCGAGGGTTATGGTTTTTCCCGTCAATGT 1366552
Query 127096 TTTTACAAAAATCTGCATGGCTTATTTA 127123
||||| ||||||||||||| |||| ||
Sbjct 1366553 CTTTACGAAAATCTGCATGG-TTATCTA 1366579
Score = 114 bits (126), Expect = 1e-20
Identities = 153/210 (73%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964
|| ||||| | ||||| ||||| |||||||||||||| | || ||| ||| ||
Sbjct 1364177 ACTAAATGGAGAGTAGATTCTTTCTGAATATTGTAATCAGAAAGTGTACGACCATCTTCC 1364236
Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024
|| ||||| |||||| |||| |||| ||||||||| || || ||||| || |||| | ||
Sbjct 1364237 AGTTGTTTACCAGCGAAGATTAATCTCTGCTGATCTGGTGGAATGCCTTCTTTGT-CTTG 1364295
Query 127025 ATTTTCTG-CTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083
| ||| || ||| | | ||| | ||||| | ||| ||||| | || | |||||
Sbjct 1364296 AATTTTTGCCTTCACGTTTTCAATAGTGTCAGACGCCTCAACTTCCAGAGTTATGGTTTT 1364355
Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| || ||||| || |||||||| |||||
Sbjct 1364356 TCCAGTAAGAGTCTTCACAAAAATTTGCAT 1364385
Score = 113 bits (124), Expect = 4e-20
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| || ||||||||||||||||||||| | |||||| ||| |||| ||||| |||
Sbjct 1364645 GTTGATTCTTTTTGAATATTGTAATCGGATAACGTGCGTCCATCTTCTAATTGTTTACCA 1364704
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
|| ||||||||| || ||||| ||||| || || || |||||| ||||| |||
Sbjct 1364705 GCAAAGATCAATCTTTGTTGATCTGGAGGAATACCTTCTTTGTCCTGAATTTTAGCCTTT 1364764
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096
| | || | |||||| | ||| ||||| | ||| | ||||| || || || |||
Sbjct 1364765 ACATTCTCAATGGTGTCAGATGCCTCAACTTCCAAGGTTATAGTTTTTCCAGTAAGGGTT 1364824
Query 127097 TTTACAAAAATCTGCAT 127113
|| || || ||||||||
Sbjct 1364825 TTCACGAATATCTGCAT 1364841
Score = 104 bits (114), Expect = 2e-17
Identities = 164/230 (71%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945
|||||| || | || | || | ||| | || || |||||||||||||||||||||
Sbjct 1365887 TCCACCACGGAGACGGAGTACAAGATGAAGGGTTGATTCTTTTTGAATATTGTAATCGGA 1365946
Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005
| |||||| ||| |||| ||||| ||||| ||||||||| || ||||| |||||
Sbjct 1365947 TAACGTGCGTCCATCTTCTAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGAGG 1366006
Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGC-TTGAGTTGTTCGACGGTGTCCG-TACTCTCG 127063
|| || || |||||| ||| ||| || || | | ||| | || || | | || ||
Sbjct 1366007 AATACCTTCTTTGTCC-TGAATTTTGGCTTTAACATTTTCAATTGTATCTGATGCT-TCC 1366064
Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
||||||| || | || || || |||| || ||||| || ||||||||
Sbjct 1366065 ACTTCGAGAGTGATGGTCTTTCCAGTCAATGTCTTTACGAAGATCTGCAT 1366114
Score = 89.7 bits (98), Expect = 5e-13
Identities = 148/213 (69%), Gaps = 18/213 (8%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| || ||||||||||||||||||||| | |||||| ||| |||| ||||| |||
Sbjct 1364992 GTTGATTCTTTTTGAATATTGTAATCGGATAACGTGCGTCCATCTTCTAATTGTTTACCA 1365051
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGG--------------TATGCCCTCCTTGTCCG 127022
|| ||||||||| || ||||| ||||| ||||| ||||| |||
Sbjct 1365052 GCAAAGATCAATCTTTGTTGATCTGGAGGAATACCTTCTTTGTGATGCCTTCCTTATCCT 1365111
Query 127023 TGATTTTCTGCTTGA--GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGT 127080
|||||| |||| | ||| || | ||||||| ||| ||||| | || | ||
Sbjct 1365112 GGATTTT-AGCTTTAACGTT-CTCAATAGTGTCCGATGCCTCAACTTCCAAAGTAATGGT 1365169
Query 127081 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| ||||| |||||||| || ||||| |||||
Sbjct 1365170 CTTTCCGGTAAGAGTTTTCACGAAAATTTGCAT 1365202
>seq307
Length=2169461
Score = 105 bits (116), Expect = 6e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945
||| || || | || || |||| ||| | || || ||||||||||| ||||||||
Sbjct 1515899 TCCTCCCCGAAGTCTCAGAACCAGATGAAGTGTGGATTCTTTTTGAATGTTGTAATCAGA 1515840
Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005
| || | ||| || ||||| ||||| || |||| ||||| |||||||| |||||
Sbjct 1515839 GAGTGTCCTCCCATCTTCGAGCTGCTTTCCTGCAAAGATTAATCGTTGCTGATCTGGAGG 1515780
Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065
||| ||||| |||||| ||| || |||| | || | ||||| | | |||||
Sbjct 1515779 TATTCCCTCTTTGTCCTGGATCTTAGCTTTGACATTCTCTATTGTGTCAGAAGCTTCGAC 1515720
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
||| | ||| | ||||| || || ||||| || || || || |||||
Sbjct 1515719 TTCCAGGGTGATGGTTTTTCCTGTGAGAGTCTTGACGAAGATTTGCAT 1515672
Score = 98.7 bits (108), Expect = 9e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964
|||| ||| | || || ||||||||||| || ||||| || || | ||| ||
Sbjct 1510299 ACCAGATGAAGTGTGGATTCTTTTTGAATGTTATAATCTGACAGTGTCCTTCCATCTTCG 1510240
Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024
||||| || || || |||| ||||| ||||| || ||||| || ||||| |||||| |
Sbjct 1510239 AGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGAGGGATTCCCTCTTTGTCCTGG 1510180
Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084
|| ||| ||| | | ||| | ||||| | | |||||||| | ||| | |||||
Sbjct 1510179 ATCTTCGCCTTTACATTTTCAATTGTGTCAGAAGCTTCGACTTCCAGGGTGATGGTTTTT 1510120
Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| || ||||| || || || || |||||
Sbjct 1510119 CCTGTGAGAGTCTTGACGAAGATTTGCAT 1510091
Score = 98.7 bits (108), Expect = 9e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964
|||| ||| | || || ||||||||||| || ||||| || || | ||| ||
Sbjct 1510527 ACCAGATGAAGTGTGGATTCTTTTTGAATGTTATAATCTGACAGTGTCCTTCCATCTTCG 1510468
Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024
||||| || || || |||| ||||| ||||| || ||||| || ||||| |||||| |
Sbjct 1510467 AGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGAGGGATTCCCTCTTTGTCCTGG 1510408
Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084
|| ||| ||| | | ||| | ||||| | | |||||||| | ||| | |||||
Sbjct 1510407 ATCTTCGCCTTTACATTTTCAATTGTGTCAGAAGCTTCGACTTCCAGGGTGATGGTTTTT 1510348
Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| || ||||| || || || || |||||
Sbjct 1510347 CCTGTGAGAGTCTTGACGAAGATTTGCAT 1510319
Score = 98.7 bits (108), Expect = 9e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964
|||| ||| | || || ||||||||||| || ||||| || || | ||| ||
Sbjct 1514961 ACCAGATGAAGTGTGGATTCTTTTTGAATGTTATAATCTGACAGTGTCCTTCCATCTTCG 1514902
Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024
||||| || || || |||| ||||| ||||| || ||||| || ||||| |||||| |
Sbjct 1514901 AGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGAGGGATTCCCTCTTTGTCCTGG 1514842
Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084
|| ||| ||| | | ||| | ||||| | | |||||||| | ||| | |||||
Sbjct 1514841 ATCTTCGCCTTTACATTTTCAATTGTGTCAGAAGCTTCGACTTCCAGGGTGATGGTTTTT 1514782
Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| || ||||| || || || || |||||
Sbjct 1514781 CCTGTGAGAGTCTTGACGAAGATTTGCAT 1514753
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945
||| || || | || ||| |||| ||| | || || ||||||||||| ||||||||
Sbjct 1515443 TCCTCCTCGAAGTCTCAAAACCAGATGAAGTGTGGATTCTTTTTGAATGTTGTAATCAGA 1515384
Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005
| || | ||| || || ||||| ||||| |||| ||||| ||||||| || ||
Sbjct 1515383 GAGTGTCCTTCCATCTTCAAGTTGTTTCCCAGCAAAGATTAATCGTTGCTGATGAGGGGG 1515324
Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065
|| ||||| |||||| ||| || ||| | | ||| | ||||| | | |||||
Sbjct 1515323 AATTCCCTCTTTGTCCTGGATCTTTGCCTTTACATTTTCAATTGTGTCAGAAGCTTCGAC 1515264
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
||| | || | ||||| || || || || || ||||| || |||||
Sbjct 1515263 TTCCAGAGTGATGGTTTTCCCTGTGAGTGTCTTGACAAAGATTTGCAT 1515216
Score = 93.3 bits (102), Expect = 4e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964
|||| ||| | || || ||||||||||| || ||||| || || | ||| ||
Sbjct 1509843 ACCAGATGAAGTGTGGATTCTTTTTGAATGTTATAATCTGACAGTGTCCTTCCATCTTCG 1509784
Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024
||||| || || || |||| ||||| ||||| || ||||| || ||||| |||||| |
Sbjct 1509783 AGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGAGGGATTCCCTCTTTGTCCTGG 1509724
Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084
|| ||| ||||| | || | || || | | |||||||| | ||| | || ||
Sbjct 1509723 ATCTTCGCCTTGACATTCTCTATCGTATCTGAAGCTTCGACTTCCAGGGTGATGGTCTTC 1509664
Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| || || || || ||||| ||||||||
Sbjct 1509663 CCTGTAAGTGTCTTGACAAAGATCTGCAT 1509635
Score = 89.7 bits (98), Expect = 5e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964
|||| ||| | || || ||||||||||| || ||||| || || | ||| ||
Sbjct 1510071 ACCAGATGAAGTGTGGATTCTTTTTGAATGTTATAATCTGACAGTGTCCTTCCATCTTCG 1510012
Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024
||||| || || || |||| ||||| ||||| || ||||| || ||||| |||||| |
Sbjct 1510011 AGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGAGGGATTCCCTCTTTGTCCTGG 1509952
Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084
|| ||| ||| | | ||| | ||||| | | |||||||| | || | |||||
Sbjct 1509951 ATCTTCGCCTTTACATTTTCAATTGTGTCAGAAGCTTCGACTTCCAGAGTGATGGTTTTC 1509892
Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| || || || || || || || |||||
Sbjct 1509891 CCTGTGAGTGTCTTCACGAAGATTTGCAT 1509863
Score = 82.4 bits (90), Expect = 7e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945
||| || || | || || ||| | || | || || |||||||||||||| |||||
Sbjct 1514752 TCCTCCTCGAAGTCTCAGCACAAGGTGAAGTGTTGATTCTTTTTGAATATTATAATCTGA 1514693
Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005
| || | ||| || ||||| |||||||| |||| ||||| |||||||| |||||
Sbjct 1514692 AAGTGTCCTTCCATCTTCCAGCTGCTTTCCAGCAAAGATTAATCGTTGCTGATCAGGAGG 1514633
Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065
|| || || || || ||| || |||| | || | || || | | |||||
Sbjct 1514632 AATTCCTTCTTTATCTTGGATCTTAGCTTTGACATTCTCTATCGTATCTGAAGCTTCGAC 1514573
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
||| | ||| | ||||| || || || || || ||||| || |||||
Sbjct 1514572 TTCCAGGGTGATGGTTTTCCCTGTGAGTGTCTTGACAAAGATTTGCAT 1514525
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475463556399840
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