Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19] 6,266 sequences; 272,660,569 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq467 125 7e-24 seq307 105 6e-18 >seq467 Length=2555529 Score = 125 bits (138), Expect = 7e-24 Identities = 155/208 (75%), Gaps = 3/208 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 ||||| || ||||| |||||||| || | ||||| ||| |||| ||||| ||| Sbjct 1366374 GTAGATTCCTTTTGTATATTGTAGTCAGAAAGTGTGCGTCCATCTTCTAATTGTTTACCA 1366433 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| ||||||||| ||||||||| || || |||||||| || ||| |||||| ||||| Sbjct 1366434 GCGAAGATCAATCTCTGCTGATCTGGTGGGATGCCCTCTTTATCCTGGATTTT-TGCTTT 1366492 Query 127037 AGTTGT-TCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | | |||| |||||| | ||| || |||| ||| | ||||| || |||| || Sbjct 1366493 AACATTCTCGATGGTGTCTGATGCCTCAACCTCGAGGGTTATGGTTTTTCCCGTCAATGT 1366552 Query 127096 TTTTACAAAAATCTGCATGGCTTATTTA 127123 ||||| ||||||||||||| |||| || Sbjct 1366553 CTTTACGAAAATCTGCATGG-TTATCTA 1366579 Score = 114 bits (126), Expect = 1e-20 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 || ||||| | ||||| ||||| |||||||||||||| | || ||| ||| || Sbjct 1364177 ACTAAATGGAGAGTAGATTCTTTCTGAATATTGTAATCAGAAAGTGTACGACCATCTTCC 1364236 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 || ||||| |||||| |||| |||| ||||||||| || || ||||| || |||| | || Sbjct 1364237 AGTTGTTTACCAGCGAAGATTAATCTCTGCTGATCTGGTGGAATGCCTTCTTTGT-CTTG 1364295 Query 127025 ATTTTCTG-CTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083 | ||| || ||| | | ||| | ||||| | ||| ||||| | || | ||||| Sbjct 1364296 AATTTTTGCCTTCACGTTTTCAATAGTGTCAGACGCCTCAACTTCCAGAGTTATGGTTTT 1364355 Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || ||||| || |||||||| ||||| Sbjct 1364356 TCCAGTAAGAGTCTTCACAAAAATTTGCAT 1364385 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || || ||||||||||||||||||||| | |||||| ||| |||| ||||| ||| Sbjct 1364645 GTTGATTCTTTTTGAATATTGTAATCGGATAACGTGCGTCCATCTTCTAATTGTTTACCA 1364704 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || ||||||||| || ||||| ||||| || || || |||||| ||||| ||| Sbjct 1364705 GCAAAGATCAATCTTTGTTGATCTGGAGGAATACCTTCTTTGTCCTGAATTTTAGCCTTT 1364764 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | || | |||||| | ||| ||||| | ||| | ||||| || || || ||| Sbjct 1364765 ACATTCTCAATGGTGTCAGATGCCTCAACTTCCAAGGTTATAGTTTTTCCAGTAAGGGTT 1364824 Query 127097 TTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 1364825 TTCACGAATATCTGCAT 1364841 Score = 104 bits (114), Expect = 2e-17 Identities = 164/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| || | || | || | ||| | || || ||||||||||||||||||||| Sbjct 1365887 TCCACCACGGAGACGGAGTACAAGATGAAGGGTTGATTCTTTTTGAATATTGTAATCGGA 1365946 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | |||||| ||| |||| ||||| ||||| ||||||||| || ||||| ||||| Sbjct 1365947 TAACGTGCGTCCATCTTCTAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGAGG 1366006 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGC-TTGAGTTGTTCGACGGTGTCCG-TACTCTCG 127063 || || || |||||| ||| ||| || || | | ||| | || || | | || || Sbjct 1366007 AATACCTTCTTTGTCC-TGAATTTTGGCTTTAACATTTTCAATTGTATCTGATGCT-TCC 1366064 Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||||| || | || || || |||| || ||||| || |||||||| Sbjct 1366065 ACTTCGAGAGTGATGGTCTTTCCAGTCAATGTCTTTACGAAGATCTGCAT 1366114 Score = 89.7 bits (98), Expect = 5e-13 Identities = 148/213 (69%), Gaps = 18/213 (8%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || || ||||||||||||||||||||| | |||||| ||| |||| ||||| ||| Sbjct 1364992 GTTGATTCTTTTTGAATATTGTAATCGGATAACGTGCGTCCATCTTCTAATTGTTTACCA 1365051 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGG--------------TATGCCCTCCTTGTCCG 127022 || ||||||||| || ||||| ||||| ||||| ||||| ||| Sbjct 1365052 GCAAAGATCAATCTTTGTTGATCTGGAGGAATACCTTCTTTGTGATGCCTTCCTTATCCT 1365111 Query 127023 TGATTTTCTGCTTGA--GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGT 127080 |||||| |||| | ||| || | ||||||| ||| ||||| | || | || Sbjct 1365112 GGATTTT-AGCTTTAACGTT-CTCAATAGTGTCCGATGCCTCAACTTCCAAAGTAATGGT 1365169 Query 127081 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || ||||| |||||||| || ||||| ||||| Sbjct 1365170 CTTTCCGGTAAGAGTTTTCACGAAAATTTGCAT 1365202 >seq307 Length=2169461 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 ||| || || | || || |||| ||| | || || ||||||||||| |||||||| Sbjct 1515899 TCCTCCCCGAAGTCTCAGAACCAGATGAAGTGTGGATTCTTTTTGAATGTTGTAATCAGA 1515840 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | || | ||| || ||||| ||||| || |||| ||||| |||||||| ||||| Sbjct 1515839 GAGTGTCCTCCCATCTTCGAGCTGCTTTCCTGCAAAGATTAATCGTTGCTGATCTGGAGG 1515780 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||| ||||| |||||| ||| || |||| | || | ||||| | | ||||| Sbjct 1515779 TATTCCCTCTTTGTCCTGGATCTTAGCTTTGACATTCTCTATTGTGTCAGAAGCTTCGAC 1515720 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| | ||| | ||||| || || ||||| || || || || ||||| Sbjct 1515719 TTCCAGGGTGATGGTTTTTCCTGTGAGAGTCTTGACGAAGATTTGCAT 1515672 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 |||| ||| | || || ||||||||||| || ||||| || || | ||| || Sbjct 1510299 ACCAGATGAAGTGTGGATTCTTTTTGAATGTTATAATCTGACAGTGTCCTTCCATCTTCG 1510240 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 ||||| || || || |||| ||||| ||||| || ||||| || ||||| |||||| | Sbjct 1510239 AGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGAGGGATTCCCTCTTTGTCCTGG 1510180 Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084 || ||| ||| | | ||| | ||||| | | |||||||| | ||| | ||||| Sbjct 1510179 ATCTTCGCCTTTACATTTTCAATTGTGTCAGAAGCTTCGACTTCCAGGGTGATGGTTTTT 1510120 Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || ||||| || || || || ||||| Sbjct 1510119 CCTGTGAGAGTCTTGACGAAGATTTGCAT 1510091 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 |||| ||| | || || ||||||||||| || ||||| || || | ||| || Sbjct 1510527 ACCAGATGAAGTGTGGATTCTTTTTGAATGTTATAATCTGACAGTGTCCTTCCATCTTCG 1510468 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 ||||| || || || |||| ||||| ||||| || ||||| || ||||| |||||| | Sbjct 1510467 AGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGAGGGATTCCCTCTTTGTCCTGG 1510408 Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084 || ||| ||| | | ||| | ||||| | | |||||||| | ||| | ||||| Sbjct 1510407 ATCTTCGCCTTTACATTTTCAATTGTGTCAGAAGCTTCGACTTCCAGGGTGATGGTTTTT 1510348 Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || ||||| || || || || ||||| Sbjct 1510347 CCTGTGAGAGTCTTGACGAAGATTTGCAT 1510319 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 |||| ||| | || || ||||||||||| || ||||| || || | ||| || Sbjct 1514961 ACCAGATGAAGTGTGGATTCTTTTTGAATGTTATAATCTGACAGTGTCCTTCCATCTTCG 1514902 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 ||||| || || || |||| ||||| ||||| || ||||| || ||||| |||||| | Sbjct 1514901 AGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGAGGGATTCCCTCTTTGTCCTGG 1514842 Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084 || ||| ||| | | ||| | ||||| | | |||||||| | ||| | ||||| Sbjct 1514841 ATCTTCGCCTTTACATTTTCAATTGTGTCAGAAGCTTCGACTTCCAGGGTGATGGTTTTT 1514782 Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || ||||| || || || || ||||| Sbjct 1514781 CCTGTGAGAGTCTTGACGAAGATTTGCAT 1514753 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 ||| || || | || ||| |||| ||| | || || ||||||||||| |||||||| Sbjct 1515443 TCCTCCTCGAAGTCTCAAAACCAGATGAAGTGTGGATTCTTTTTGAATGTTGTAATCAGA 1515384 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | || | ||| || || ||||| ||||| |||| ||||| ||||||| || || Sbjct 1515383 GAGTGTCCTTCCATCTTCAAGTTGTTTCCCAGCAAAGATTAATCGTTGCTGATGAGGGGG 1515324 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || ||||| |||||| ||| || ||| | | ||| | ||||| | | ||||| Sbjct 1515323 AATTCCCTCTTTGTCCTGGATCTTTGCCTTTACATTTTCAATTGTGTCAGAAGCTTCGAC 1515264 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| | || | ||||| || || || || || ||||| || ||||| Sbjct 1515263 TTCCAGAGTGATGGTTTTCCCTGTGAGTGTCTTGACAAAGATTTGCAT 1515216 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 |||| ||| | || || ||||||||||| || ||||| || || | ||| || Sbjct 1509843 ACCAGATGAAGTGTGGATTCTTTTTGAATGTTATAATCTGACAGTGTCCTTCCATCTTCG 1509784 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 ||||| || || || |||| ||||| ||||| || ||||| || ||||| |||||| | Sbjct 1509783 AGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGAGGGATTCCCTCTTTGTCCTGG 1509724 Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084 || ||| ||||| | || | || || | | |||||||| | ||| | || || Sbjct 1509723 ATCTTCGCCTTGACATTCTCTATCGTATCTGAAGCTTCGACTTCCAGGGTGATGGTCTTC 1509664 Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || || || || ||||| |||||||| Sbjct 1509663 CCTGTAAGTGTCTTGACAAAGATCTGCAT 1509635 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 |||| ||| | || || ||||||||||| || ||||| || || | ||| || Sbjct 1510071 ACCAGATGAAGTGTGGATTCTTTTTGAATGTTATAATCTGACAGTGTCCTTCCATCTTCG 1510012 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 ||||| || || || |||| ||||| ||||| || ||||| || ||||| |||||| | Sbjct 1510011 AGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGAGGGATTCCCTCTTTGTCCTGG 1509952 Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084 || ||| ||| | | ||| | ||||| | | |||||||| | || | ||||| Sbjct 1509951 ATCTTCGCCTTTACATTTTCAATTGTGTCAGAAGCTTCGACTTCCAGAGTGATGGTTTTC 1509892 Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || || || || || || || ||||| Sbjct 1509891 CCTGTGAGTGTCTTCACGAAGATTTGCAT 1509863 Score = 82.4 bits (90), Expect = 7e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 ||| || || | || || ||| | || | || || |||||||||||||| ||||| Sbjct 1514752 TCCTCCTCGAAGTCTCAGCACAAGGTGAAGTGTTGATTCTTTTTGAATATTATAATCTGA 1514693 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | || | ||| || ||||| |||||||| |||| ||||| |||||||| ||||| Sbjct 1514692 AAGTGTCCTTCCATCTTCCAGCTGCTTTCCAGCAAAGATTAATCGTTGCTGATCAGGAGG 1514633 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || || || || ||| || |||| | || | || || | | ||||| Sbjct 1514632 AATTCCTTCTTTATCTTGGATCTTAGCTTTGACATTCTCTATCGTATCTGAAGCTTCGAC 1514573 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| | ||| | ||||| || || || || || ||||| || ||||| Sbjct 1514572 TTCCAGGGTGATGGTTTTCCCTGTGAGTGTCTTGACAAAGATTTGCAT 1514525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475463556399840