Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19]
6,266 sequences; 272,660,569 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq307 95.1 1e-14
>seq307
Length=2169461
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
|||||||| | ||| || ||||| || || || || || || || | | || |||
Sbjct 1509843 ACCAGATGAAGTGTGGATTCTTTTTGAATGTTATAATCTGACAGTGTCCTTCCATCTTCG 1509784
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
|||||||| || || || || || || |||||||| | || | | ||| |||||| |
Sbjct 1509783 AGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGAGGGATTCCCTCTTTGTCCTGG 1509724
Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564
|||||| ||||| || | | ||| || | ||| || |||| |||||||| ||
Sbjct 1509723 ATCTTCGCCTTGACATTCTCTATCGTATCTGAAGCTTCGACTTCCAGGGTGATGGTCTTC 1509664
Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCATTTT 46596
|| || || || || |||||||| ||||| ||
Sbjct 1509663 CCTGTAAGTGTCTTGACAAAGATCTGCATATT 1509632
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
|||||||| | ||| || ||||| || ||||| || || || || | | | || |||
Sbjct 1515880 ACCAGATGAAGTGTGGATTCTTTTTGAATGTTGTAATCAGAGAGTGTCCTCCCATCTTCG 1515821
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
|||||||| || || || || || || ||||| || | || | | ||| |||||| |
Sbjct 1515820 AGCTGCTTTCCTGCAAAGATTAATCGTTGCTGATCTGGAGGTATTCCCTCTTTGTCCTGG 1515761
Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564
||||| |||| || | | ||||| | ||| || |||| |||||||||||
Sbjct 1515760 ATCTTAGCTTTGACATTCTCTATTGTGTCAGAAGCTTCGACTTCCAGGGTGATGGTTTTT 1515701
Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCATT 46594
|| || || || || || ||||||||||||
Sbjct 1515700 CCTGTGAGAGTCTTGACGAAGATTTGCATT 1515671
Score = 91.5 bits (100), Expect = 2e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
|||||||| | ||| || ||||| || || || || || || || | | || |||
Sbjct 1510071 ACCAGATGAAGTGTGGATTCTTTTTGAATGTTATAATCTGACAGTGTCCTTCCATCTTCG 1510012
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
|||||||| || || || || || || |||||||| | || | | ||| |||||| |
Sbjct 1510011 AGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGAGGGATTCCCTCTTTGTCCTGG 1509952
Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564
|||||| ||| | | | | ||||| | ||| || |||| |||||||||||
Sbjct 1509951 ATCTTCGCCTTTACATTTTCAATTGTGTCAGAAGCTTCGACTTCCAGAGTGATGGTTTTC 1509892
Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCATT 46594
|| || || || || || ||||||||||||
Sbjct 1509891 CCTGTGAGTGTCTTCACGAAGATTTGCATT 1509862
Score = 91.5 bits (100), Expect = 2e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
|||||||| | ||| || ||||| || || || || || || || | | || |||
Sbjct 1510299 ACCAGATGAAGTGTGGATTCTTTTTGAATGTTATAATCTGACAGTGTCCTTCCATCTTCG 1510240
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
|||||||| || || || || || || |||||||| | || | | ||| |||||| |
Sbjct 1510239 AGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGAGGGATTCCCTCTTTGTCCTGG 1510180
Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564
|||||| ||| | | | | ||||| | ||| || |||| |||||||||||
Sbjct 1510179 ATCTTCGCCTTTACATTTTCAATTGTGTCAGAAGCTTCGACTTCCAGGGTGATGGTTTTT 1510120
Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCATT 46594
|| || || || || || ||||||||||||
Sbjct 1510119 CCTGTGAGAGTCTTGACGAAGATTTGCATT 1510090
Score = 91.5 bits (100), Expect = 2e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
|||||||| | ||| || ||||| || || || || || || || | | || |||
Sbjct 1510527 ACCAGATGAAGTGTGGATTCTTTTTGAATGTTATAATCTGACAGTGTCCTTCCATCTTCG 1510468
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
|||||||| || || || || || || |||||||| | || | | ||| |||||| |
Sbjct 1510467 AGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGAGGGATTCCCTCTTTGTCCTGG 1510408
Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564
|||||| ||| | | | | ||||| | ||| || |||| |||||||||||
Sbjct 1510407 ATCTTCGCCTTTACATTTTCAATTGTGTCAGAAGCTTCGACTTCCAGGGTGATGGTTTTT 1510348
Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCATT 46594
|| || || || || || ||||||||||||
Sbjct 1510347 CCTGTGAGAGTCTTGACGAAGATTTGCATT 1510318
Score = 91.5 bits (100), Expect = 2e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
|||||||| | ||| || ||||| || || || || || || || | | || |||
Sbjct 1514961 ACCAGATGAAGTGTGGATTCTTTTTGAATGTTATAATCTGACAGTGTCCTTCCATCTTCG 1514902
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
|||||||| || || || || || || |||||||| | || | | ||| |||||| |
Sbjct 1514901 AGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGAGGGATTCCCTCTTTGTCCTGG 1514842
Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564
|||||| ||| | | | | ||||| | ||| || |||| |||||||||||
Sbjct 1514841 ATCTTCGCCTTTACATTTTCAATTGTGTCAGAAGCTTCGACTTCCAGGGTGATGGTTTTT 1514782
Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCATT 46594
|| || || || || || ||||||||||||
Sbjct 1514781 CCTGTGAGAGTCTTGACGAAGATTTGCATT 1514752
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565194127702320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |