Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19]
6,266 sequences; 272,660,569 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq247 425 7e-114
seq3388 280 2e-70
seq31 140 4e-28
seq540 89.7 7e-13
>seq247
Length=453697
Score = 425 bits (470), Expect = 7e-114
Identities = 995/1482 (67%), Gaps = 27/1482 (2%)
Strand=Plus/Minus
Query 6496 TTCGACCGTTCCTTTCAT-TTGATAACAGTAGTTTTCGAGACCATTCTTCGCCTCGACCT 6554
||| || || | ||||| |||| | ||||| ||||||| |||||| || |||
Sbjct 186903 TTCCACTGTACTCTTCATGTTGA-AGCAGTAAGACTCGAGACTATTCTTAGCAGCGATAG 186845
Query 6555 TTTTCGCGTACTTTTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAA 6614
||| | | ||||||||||||| ||| || || || || | ||||||| |||| |
Sbjct 186844 TTTCCTTTTGCTTTTCATCTTCACTACGATATTTCTCAGCTTCGTTGACCATCCTTTCGA 186785
Query 6615 TGTCTTCTTTCGATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCG 6674
| |||||||| | | ||||| ||||| || || || || || | |||||| |
Sbjct 186784 TATCTTCTTTACTGAGACGGCCCTTGTCATTGGTGATGGTGATTTTATTTTCTTTACCAG 186725
Query 6675 AGGCCTTATCTTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACAT 6734
| || || | || || |||| ||||| || || || | || || | || |
Sbjct 186724 TAGATTTGTCCACTGCCGAGACGTTCAGGATACCGTTGGCGTCGATGTCAAAGGTGACTT 186665
Query 6735 TAATTTGTGGTGTACCCCTCGGTGCG--GCTGGAATACCCGTTAAATCAAATGTACCAAG 6792
||||| || || |||||| | | | ||||||||| | | |||||| |||| |
Sbjct 186664 CGATTTGAGGA--ACTCCTCGGGGAGCTGGTGGAATACCACTGAGCTCAAATTTACCTAA 186607
Query 6793 TAAACTGTTATCCGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGG 6852
| | |||| || ||| | | ||| || ||||| ||||||| || || | ||
Sbjct 186606 CAGATTGTTGTCTTTCGTCATTGCACGCTCTCCTTCGTAGACTTGGATCAATACACCTGG 186547
Query 6853 TTGATTATCTTGTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCT 6912
||| ||||| ||| | |||| |||| || ||| | |||||| || ||||||||
Sbjct 186546 TTGGTTATCAGCGTACGTGGTGAAGGTTTGCGTTTGCTTTGTTGGAATGGTTGTATTTCT 186487
Query 6913 CGGAATAACCGGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCAC 6972
| || | | |||||| | |||||| |||||||| |||||||||| |||||| ||
Sbjct 186486 CTTGATGAGAGCGGTCATCACACCACCAGCAGTTTCGATACCAAGAGACAAAGGTGTAAC 186427
Query 6973 GTCCAAGAGTAACAGGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAG-ATGGCGGCTT 7031
|| | || ||||||||||| || ||| | ||| |||| || || || ||||
Sbjct 186426 ATCGAGAAGCAACAGGTCTTGTACTTCTTCAGACTTATCA-CCGTGCAGAATTGCAGCTT 186368
Query 7032 GGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTAC 7091
| || | || || || || || ||||| || |||||||| | ||| |||||||| || |
Sbjct 186367 GTACGGCAGCTCCATAAGCCACAGCCTCGTCAGGGTTAATGGATTTGTTCAGTTCCTTTC 186308
Query 7092 CGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCA 7151
|||| || |||| ||| | || ||||| || || || ||||| |||||||| ||||
Sbjct 186307 CGTTGAAGAAATCTTGTAAGAGTTTCTGAATCTTAGGAATACGTGTTGATCCACCAACCA 186248
Query 7152 AAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAG 7211
||||||| || | | || | |||||| || || | || || || | ||| || || |
Sbjct 186247 AAACGATATCGTGAATTTGAGCTTTATCCATTTTAGCATCGCGCAGCGATTTCTCCACTG 186188
Query 7212 GTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGG 7271
| || | | | ||| | || || || || || ||||| || | ||| || |
Sbjct 186187 GCTCTAGTGTTCCTCTGAATAGATCAGCGCAGAGCTCTTCGAAACGAGCCCTGGTGATCG 186128
Query 7272 ATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCG 7331
| || |||||||||| || || || | |||||| ||||| ||| | | ||| | | ||
Sbjct 186127 AAGTGTAGAAATCAATTCCCTCATAGAGCGAATCGATTTCGATGCTAGCTTGAGTGGACG 186068
Query 7332 AAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGT 7391
|||||||||| || || || |||||||| ||||||| || |||||||||||||||| |
Sbjct 186067 AAGATAACGTGCGTTTCGCACGCTCACAAGCCGTTCTTAGACGACGAAGGGCACGCTTAT 186008
Query 7392 TACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAG--AGAAGTGTCGAAGGAG 7449
| | | || ||||| | ||||||||| || || ||| ||| || | |
Sbjct 186007 TCGAGACGAGGTCCTTCTTGTATTTACGTTTGAATTC--CAGGACGAAATGATTGACCAT 185950
Query 7450 TCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAA 7509
|| |||||| ||||| || || | || || || || || || | ||||| || ||
Sbjct 185949 TCGGTTATCGAAGTCTTCGCCGCCAAGATGAGTGTCTCCTGCTGTAGACTTGACCTCGAA 185890
Query 7510 GATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAAT 7569
|| || ||||||| | || | || ||||| || || |||||||| || ||||| ||
Sbjct 185889 AATGCCATCTTCAATAGTCAAAATAGACACATCGAAGGTGCCACCACCAAGATCAAAGAT 185830
Query 7570 GAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGT 7629
|| ||||| || | | | |||||||| | ||| || || || || || || ||
Sbjct 185829 TAGGACGTTGCGCTCATTGGTGGTTTTCTTATCTAAACCATAAGCAATGGCAGCAGCGGT 185770
Query 7630 TGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGC 7689
|| ||||| || ||||| | | ||||| ||| | || || | || || || || ||
Sbjct 185769 GGGCTCATTGATGATACGTAAAACGTTCAAGCCCGAGATGGTACCAGCGTCCTTGGTTGC 185710
Query 7690 TTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTT 7749
|| || ||||| ||||| ||||| || || || || | || || | ||||| ||||
Sbjct 185709 CTGACGCTGCGAGTCGTTGAAGTAAGCAGGTACAGTGATCACAGCATTAGTGACGGTCTT 185650
Query 7750 ACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATC---TC 7806
||||| || | || || | || ||||| || || ||||| |||| || ||
Sbjct 185649 CCCGAGGTATGCCTCAGCAGTTTCCTTCATCTTCACCAGGACCAT---TGAACTCACTTC 185593
Query 7807 TTCAGCCGCAAACTGT-TTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCG 7865
||||| | | | || ||||| || || || | | |||| ||| ||||||| ||
Sbjct 185592 TTCAG-GGAAGAAAGTCTTCGTCTCTCCTTTGTAGTGTACTTGGATCTTGGGTTT-TC-- 185537
Query 7866 CAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGT-TGGTCC 7924
|| || || ||||| | | | ||||| ||||||||| | | || |||| ||||
Sbjct 185536 CACCATCGTTTATAACGGTGAATGGCCAATGTTTCATATCAGCCT-GAACTGTAGGGTCT 185478
Query 7925 GAAAACTTTCTTCCGATAAGACGCTTTGCATC--AAAAACTG 7964
||| | ||| ||||| ||||| ||||| ||||| ||
Sbjct 185477 TCGAACCGACGTCCAATAAGGCGCTTGGCATCTGAAAAATTG 185436
Score = 82.4 bits (90), Expect = 1e-10
Identities = 133/191 (70%), Gaps = 3/191 (2%)
Strand=Plus/Minus
Query 7958 AAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGT 8017
|||| ||||| |||||||||||||| ||||||||| || || || ||||| | |||
Sbjct 184764 AAAATGGTGTTGTTGGGGTTCATGGCGACTTGGTTCTTGGCAGCATCGCCGATTAACCGT 184705
Query 8018 TCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCA 8077
|| | || ||||| || ||||| || || || || || ||||| || || ||
Sbjct 184704 TC---GGTGTCTGTAAATGCAACGTAGCTAGGTGTAGTACGGTTTCCTTGATCATTGGCG 184648
Query 8078 ATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCA 8137
|| ||||| || | | || | || || ||||| ||||| || || || | ||||
Sbjct 184647 ATGATTTCCACTTTTCCATGCTGGAATACTCCAACGCAGGAATAGGTGGTGCCGAGATCA 184588
Query 8138 ATACCGATTGC 8148
||||| | |||
Sbjct 184587 ATACCAACTGC 184577
>seq3388
Length=1606789
Score = 280 bits (310), Expect = 2e-70
Identities = 732/1107 (66%), Gaps = 22/1107 (2%)
Strand=Plus/Minus
Query 6705 TACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTC--GGTGCGGC 6762
|||| || | ||| | |||||| | || | || || || ||||||| || || |
Sbjct 137011 TACCGTTCGAATCGATATCGAAAGTAACTTCGATCTGAGGA--ACCCCTCTAGGCGCAGG 136954
Query 6763 TGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTCTTACGTTC 6822
||||||||| || | || ||| | || || | | | || || | | | | | |||
Sbjct 136953 TGGAATACCGGTAAGCTCGAATTTTCCTAGAATATTATTGTCTTTGGTCATGGCTCTTTC 136894
Query 6823 ACCTTCATAGACTTTAATT--GTCACCGCAGGTTGATTATCTTGTGCCGTTGAGAAGATT 6880
||||| || |||| ||| | ||||| ||||||||||| || | |||| ||
Sbjct 136893 TCCTTCGTATACTTGAATCAAGACACCG--GGTTGATTATCCGAATAGGTGGTGAAGGTT 136836
Query 6881 TGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCC 6940
|| || || | || || ||||| || ||| || | | ||||| | ||| ||
Sbjct 136835 TGCGTTTGTTTGGTCGGTATGGTCGTGTTCCTCTTGATCAAAGTAGTCATTACACCGCCA 136776
Query 6941 ATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGG---TCTTGAACA 6997
||||||| || || |||| || || || |||| ||||||| ||||||||
Sbjct 136775 GCTGTTTCGATACCCAGGGACAATGGCGTGACATCCA---GTAACAGCAAATCTTGAACC 136719
Query 6998 GATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCC 7057
| ||| | || || |||||||| ||||| || | || || || || || ||
Sbjct 136718 GCCTCGGACTTGTCGCCGTGCAAGATGGCAGCTTGCACAGCGGCTCCATAGGCTACAGCT 136659
Query 7058 TCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGT 7117
|| || || || || | ||| |||| ||||| ||||| || | || | | || |
Sbjct 136658 TCGTCCGGATTGATGGATTTGTTCAACTCTTTGCCGTTGAAGAAGTCTTGCAGTAATTTT 136599
Query 7118 TGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTA 7177
||||| || || |||| |||||||||||||| | ||||| | |||| || |||
Sbjct 136598 TGAATCTTTGGTATTCTAGTCGATCCACCGACTAGTACGATACTGTGAACTTGAGACTTA 136539
Query 7178 TCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCA---TACATTTACGGAACAAG 7234
|| ||||| | ||| | | | || || || ||||| | ||| | | |||||
Sbjct 136538 TCCATCTTAGCGTCCCTCAAAGCCTTCTCCACGGGTTCTAGGGTAC---TCCTGAACAGA 136482
Query 7235 TCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCG 7294
||| || ||||| || || || || | ||||||||| ||||||||||| | || |||
Sbjct 136481 TCCGAGCAAAGTTCTTCGAATCGAGCCCTGGTAATGGAAGTATAGAAATCGATACCCTCG 136422
Query 7295 TATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGC 7354
| | ||||| ||||| || | | ||| | | ||| | |||| ||| || | |
Sbjct 136421 AACAGAGAATCGATTTCGATACTCGCTTGCGTGGACGAGCTCAGGGTTCTCTTCGCTCTC 136362
Query 7355 TCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGT 7414
|| || || |||| | || | || || | | ||| || | ||| ||||| | |
Sbjct 136361 TCGCAGGCTGTTCTCAGTCGTCTGAGTGCTCTCTTGTTCACGCTCAGATCCTTCTTGTAT 136302
Query 7415 TTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCC 7474
|| | || || || | |||||| | | | ||||| || || || ||
Sbjct 136301 TTCCTCTTGAATTCCTGCTCGAAGTGATTCACCATACGATTGTCGAAGTCCTCTCCTCCA 136242
Query 7475 AAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAAC 7534
| ||| || || || || |||| ||| || || |||||||| | || ||| | | | |
Sbjct 136241 AGGTGAGTGTCTCCTGCCGTCGATTTCACCTCGAAGATACCATCCTCGATGGTCAGGATC 136182
Query 7535 GAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTG 7594
|| ||||| || |||||||| ||||||||||| || | |||||| | ||| | | |
Sbjct 136181 GACACATCGAAGGTACCACCTCCCAGGTCAAAGATCAAAACGTTCTTTTCGCCCGATGTC 136122
Query 7595 TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACG-AAGACA 7653
| ||||| | || || ||||| || ||||| || ||||| || || || | || |||
Sbjct 136121 CTTTTATCTAAGCCATAAGCGATCGCTGCCGCGGTCGGTTCGTTGATGATTCTCAAAACA 136062
Query 7654 GTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTA 7713
||||| ||||| || | | | || |||||||| ||||||| ||||||||||| |||||
Sbjct 136061 -TTCAGACCAGCTATCGCTCCTGCGTCTTTCGTGGCTTGTCTCTGCGAATCGTTGAAGTA 136003
Query 7714 GGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATC 7773
|| || || || | || || | || ||| |||| || | ||||| |||||| | ||
Sbjct 136002 CGCTGGCACGGTGATCACGGCATTGGTCACTGTCTTCCCCAAATACGCTTCCGCCGTTTC 135943
Query 7774 TTTCATTTTGGTAAGAACCATCGATGA 7800
||||| || || ||||||||||| ||
Sbjct 135942 CTTCATCTTCGTTAGAACCATCGAAGA 135916
Score = 91.5 bits (100), Expect = 2e-13
Identities = 132/186 (71%), Gaps = 3/186 (2%)
Strand=Plus/Minus
Query 7964 GTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTA 8023
||||| |||| |||||||| || || |||||||| || ||||| || | ||| |
Sbjct 135242 GTGTTGGTGGGATTCATGGCGACCTGATTTTTCGCCGCATCGCCGATTAGCCTTTCGGTG 135183
Query 8024 TTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATT 8083
| | ||||| || ||||| || ||||||||||| ||||| || || ||||| ||
Sbjct 135182 TCT---GTAAAGGCAACGTAACTCGGCGTCGTTCGATTTCCTTGATCATTTGCAATGATC 135126
Query 8084 TCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCG 8143
|| || | | || |||| || ||||| || || |||||||||||||| || ||
Sbjct 135125 TCAACCTTTCCATGCTGGAAGACACCCACGCAGGAGTAGGTTGTTCCTAAATCGATTCCA 135066
Query 8144 ATTGCT 8149
| ||||
Sbjct 135065 ACTGCT 135060
>seq31
Length=2718342
Score = 140 bits (154), Expect = 4e-28
Identities = 197/274 (72%), Gaps = 2/274 (1%)
Strand=Plus/Minus
Query 6640 ATCATTCGTAATCGTAATCTTTTCG-GATTTACCCGAGGCCTTATCTTCAGCACTTACAT 6698
|||||| ||||| |||||| ||| ||||| || | | ||||||||||| ||| |
Sbjct 1222640 ATCATTGGTAATAACAATCTTCTCGCGATTT-CCAGTTCCTTTATCTTCAGCGGATACTT 1222582
Query 6699 TCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTCGGTG 6758
| ||||||||| ||||||| ||||| | || | |||||||||| | || | ||||
Sbjct 1222581 GAAGAATACCATTAGCATCAATTTCGAAAGTGACTTCAATTTGTGGTATTCCTCGAGGTG 1222522
Query 6759 CGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTCTTAC 6818
| | ||||||||| || | ||| ||| ||||||| | | || || | | | | ||
Sbjct 1222521 CCGGTGGAATACCAGTAAGATCGAATTTACCAAGAAGATGATTGTCTTTTGTCATTGGAC 1222462
Query 6819 GTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTTGAGAAGA 6878
||||||||||||| |||| || || || | | ||||||||||| ||||| ||||| |
Sbjct 1222461 GTTCACCTTCATATACTTGGATCGTAACGGTATGTTGATTATCTGACGCCGTAGAGAAAA 1222402
Query 6879 TTTGTTCTTTCTTAGATGGAATCGTCGTATTTCT 6912
|||| ||| || | ||||| ||||||||
Sbjct 1222401 TTTGCGATTTTTTCGTCGGAATGACAGTATTTCT 1222368
>seq540
Length=246768
Score = 89.7 bits (98), Expect = 7e-13
Identities = 145/206 (70%), Gaps = 2/206 (1%)
Strand=Plus/Plus
Query 11439 ACTTCTTTTCTTACCAATCGCATCAATTTCATCTATAAAGATAATACACGGTTGATTTTC 11498
|| ||||||| | |||| ||||| |||||||| ||||| | || || || || |
Sbjct 136470 ACCTCTTTTCCTTCCAACGGCATCGATTTCATCAATAAATAATATGCATGGAGCATGCTT 136529
Query 11499 ACGTGCCAATTCAAATATATCACGGACTCTTTTTGCGCCTACGCCTACAAACATTTCAAC 11558
||||||| | |||| || ||||| ||||| | || || || ||||||||||| |
Sbjct 136530 TCGTGCCATTGCAAACATGTCACGAACTCTCGAAGGACCAACACCGACAAACATTTCCAG 136589
Query 11559 GAACGATGACCCCGA-ACACTGAATAAAAGGAACGGAAGATTCACCCGCTATAGCACGTG 11617
|| || || || ||||| ||| |||||||| | |||||| ||| |||| |
Sbjct 136590 AAATTCAGAACCTGACACACT-AATGAAAGGAACATTTGCTTCACCAGCTGTAGCCTTAG 136648
Query 11618 CTAAAAGTGTTTTACCTGTACCTGGT 11643
|||| | ||||| |||||||| |||
Sbjct 136649 CTAACAACGTTTTGCCTGTACCAGGT 136674
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635083053223440
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