Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19] 6,266 sequences; 272,660,569 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq61 87.8 2e-12 >seq61 Length=1771752 Score = 87.8 bits (96), Expect = 2e-12 Identities = 164/241 (68%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 159539 TGTCATGTATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGAC 159598 |||| ||| | ||||| || ||||||||||| |||| || |||||| || || Sbjct 1479648 TGTCCTGTTTAATGATAACGTATCCATCTACGAATGGCGTGTTTGAAGAGTCGATTAGCG 1479707 Query 159599 AGATATGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAA 159658 | || ||| || |||||| | ||| || || || || | ||||| || || | | Sbjct 1479708 ATATTTGTTCAATAGTTCATCAAGCTGGAGGGCAAGTGTACTTGGATGGAGCTAACATGA 1479767 Query 159659 ATGCACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACT 159718 |||| || || || | ||| |||| || ||| || || | ||| | |||| Sbjct 1479768 ATGCCCAAGTTGGGTTGTGTCGTCCAGGTGATTACGGTAGTGACGTTTCCCATTTGAACT 1479827 Query 159719 TACATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTG 159778 | ||||| || |||||||| || ||||| || ||||| ||||| | || |||||||| | Sbjct 1479828 TGCATAAAACTTTCTGTATACCTCATGGTGGAGGAGGGCCTGGAATGGGACCTATTGGGG 1479887 Query 159779 T 159779 | Sbjct 1479888 T 1479888 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588005140889760