Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19] 6,266 sequences; 272,660,569 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq247 215 4e-50 seq1651 194 1e-43 seq3388 161 8e-34 seq467 156 3e-32 seq31 122 7e-22 seq321 120 2e-21 seq307 120 2e-21 seq113 116 3e-20 seq140 87.8 1e-11 >seq247 Length=453697 Score = 215 bits (238), Expect = 4e-50 Identities = 530/798 (66%), Gaps = 8/798 (1%) Strand=Plus/Plus Query 551790 GGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCATGGTGTGTTG 551847 ||||| |||||||||| |||||||| || ||||| || |||| ||||| || || Sbjct 185911 GGAGACACTCATCTTGGCGGCGAAGACTTCGATAACCGAATGGTCAATCATTTCGTCCTG 185970 Query 551848 AAGATTTTAAACGAAAAAACAAAGTTGATCTA-TCTACA-TCTGCCAAAGCTCTTCGTCG 551905 || || ||||| ||| |||| || || ||| | | || || |||||||| Sbjct 185971 --GAATTCAAACGTAAATACAAGAAGGACCTCGTCTCGAATAAGCGT--GCCCTTCGTCG 186026 Query 551906 TCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTAT 551965 ||||||||| ||||| || | || ||||| | | || || |||||| | | || Sbjct 186027 TCTAAGAACGGCTTGTGAGCGTGCGAAACGCACGTTATCTTCGTCCACTCAAGCTAGCAT 186086 Query 551966 TGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATT 552025 ||| | ||||| | | |||||||||||||| | || | || | ||||| || Sbjct 186087 CGAAATCGATTCGCTCTATGAGGGAATTGATTTCTACACTTCGATCACCAGGGCTCGTTT 186146 Query 552026 TGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAG 552085 ||||| | || ||||||| || ||| |||| | || ||||| || || | | Sbjct 186147 CGAAGAGCTCTGCGCTGATCTATTCAGAGGAACACTAGAGCCAGTGGAGAAATCGCTGCG 186206 Query 552086 AGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAG 552145 ||| | || || |||||| | || | || || || || | ||||||||||| ||| | Sbjct 186207 CGATGCTAAAATGGATAAAGCTCAAATTCACGATATCGTTTTGGTTGGTGGATCAACACG 186266 Query 552146 AATTCCTAAAATTCGCGAAATGTTAAGTTCTTATTTCAATGGTAAAAAATTAAATGAAAG 552205 |||||||| |||| || | ||| || ||||| || || || | || || Sbjct 186267 TATTCCTAAGATTCAGAAACTCTTACAAGATTTCTTCAACGGAAAGGAACTGAACAAATC 186326 Query 552206 TGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGG 552265 |||| || || |||||||| || ||||| || || | ||||| || ||||| || Sbjct 186327 CATTAACCCTGACGAGGCTGTGGCTTATGGAGCTGCCGTACAAGCTGCAATTCTGCACGG 186386 Query 552266 ACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGG 552325 | | |||| || ||||| | | | ||| | |||||||| ||| | |||||||| Sbjct 186387 TGATAAGTCTGAAGAAGTACAAGACCTGTTGCTTCTCGATGTTACACCTTTGTCTCTTGG 186446 Query 552326 TTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTG 552385 | | ||||| | ||| ||| | ||||| ||| ||| | |||||||| || ||||| Sbjct 186447 TATCGAAACTGCTGGTGGTGTGATGACCGCTCTCATCAAGAGAAATACAACCATTCCAAC 186506 Query 552386 TAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAAT 552445 || || | | || | ||||| | ||||| ||| | | ||| || ||| | Sbjct 186507 AAAGCAAACGCAAACCTTCACCACGTACGCTGATAACCAACCAGGTGTATTGATCCAAGT 186566 Query 552446 TTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGA 552505 | |||||||| | | | || ||||| || |||| | |||| ||| | | Sbjct 186567 CTACGAAGGAGAGCGTGCAATGACGAAAGACAACAATCTGTTAGGTAAATTTGAGCTCAG 186626 Query 552506 AGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGC 552565 |||||||| || ||||| || ||||| || ||||| ||||| || || || ||||| || Sbjct 186627 TGGTATTCCACCAGCTCCCCGAGGAGTTCCTCAAATCGAAGTCACCTTTGACATCGACGC 186686 Query 552566 CAATGGAATTTTGAATGT 552583 ||| || || |||| || Sbjct 186687 CAACGGTATCCTGAACGT 186704 >seq1651 Length=1141625 Score = 194 bits (214), Expect = 1e-43 Identities = 409/599 (68%), Gaps = 22/599 (4%) Strand=Plus/Plus Query 368551 AAACATTTTGATAATTGGCTCCAAAATTCAGTTGATTGGTGTATTTCAAGAAGTAGGTTT 368610 |||| |||| ||||||| | | || | ||||||| |||| |||| | | | | Sbjct 715302 AAACGATTTGGTAATTGGTTGAGAGATGCTCGTGATTGGGCTATTAGTAGAAATCGTTAT 715361 Query 368611 TGGGGAACTCCAATTCCAGTATGGAAATCTGATGATGGTGAAGAAATTGTTTGTATAGGT 368670 ||||| | |||||||||| |||||| || || ||||| ||||||| || || ||||| Sbjct 715362 TGGGGTAATCCAATTCCATTATGGATCTCAGAAGATGGACAAGAAATAGTATGCATAGGA 715421 Query 368671 TCAATTAAAGAATTGCAAGAATTATCTGGTGTGCAAAATATTAGTGATTTACATATTGAT 368730 ||| ||||||| |||||||| || | | |||||| || ||| |||| || Sbjct 715422 AGTATTGCAGAATTGGAAGAATTAACTAATACG-AAAATAACAGATATT--CATAGAGAA 715478 Query 368731 AAAATTGATCACATTAAAATTCCATCAAAGAAAGGAAAAGGTTT---ATTGTCTCGAGTT 368787 | || ||| | | | || ||||| | | || ||| | | || ||| | Sbjct 715479 AGTATAGATGATTTAACTATACCATCCAG---ACGACCAGGATATCCACCGTTGCGACGT 715535 Query 368788 GAA---GGAGTTTTGGATTGCTGGTTTGAATCAGGTTCTATGCCTTATGGTCAAATACAT 368844 | | | ||| || ||||| ||||||||||||||||||||||| |||| ||||| ||| Sbjct 715536 GTACCCGAAGTATTTGATTGTTGGTTTGAATCAGGTTCTATGCCATATGCACAAATGCAT 715595 Query 368845 TATCCATTTGATAACGCAAAATACTTTGATAATGATAAAGATTATGTGGCTGATTTTGTA 368904 || || ||||| || |||| | ||||| | || || | ||||||||| | Sbjct 715596 TACCCTTTTGAGAATCGAAAAGAATTTGAGGAG-----AGTTT-TCCAGCTGATTTTATT 715649 Query 368905 ACAGAATCAATTGATCAAACACGTGGTTGGTTTTATACCCTATTAGTATTATCCACAGCT 368964 |||| ||||||||||| || ||||||||||||||||| ||||| |||| || ||| Sbjct 715650 GGAGAAGGTATTGATCAAACTCGCGGTTGGTTTTATACCCTTTTAGTTATATCTACTGCT 715709 Query 368965 ATTTTCGATAAACCGGCTTTTAAAAATGTAATAGTAACTGGTATTGTTAAT-GCATCTGA 369023 |||| | ||| | | ||||||||| | | | | |||| || || | |||||||| Sbjct 715710 CTTTTTGGAAAAGCTCCATTTAAAAATCTTGTTGCCAATGGT-TTAATACTAGCATCTGA 715768 Query 369024 TGGTCAAAAGATGTCAAAAAGTAAGGGTAATTATTCCGATCCTA-ATATTTTAATTGATA 369082 ||| ||||||||||| || | || |||||| | ||||| | | | || || | | Sbjct 715769 TGGGCAAAAGATGTCCAAGCGCAAAAAGAATTATCCAGATCCCATAGAAATT-GTTAACA 715827 Query 369083 AATTTGGTGCTGATACTTTGAGATTATACCTATTGTCATCACCTGTAGTAAAAGCAGAA 369141 ||| || |||||| || | | || ||| || | || ||||| |||| ||| ||| Sbjct 715828 AATACGGAGCTGATGCTCTTCGTTTGTACTTAATTAATTCTCCTGTTGTAAGAGCGGAA 715886 Score = 95.1 bits (104), Expect = 1e-13 Identities = 149/209 (71%), Gaps = 12/209 (6%) Strand=Plus/Plus Query 367546 ATTGGAAGATGGATTGACGTAAAAAATGAATATAAAACAATGGATACTAATTTCATGGAA 367605 || || || ||||| || | |||||||| || |||||| | || || | ||||||| Sbjct 714387 ATCGGCAGGTGGATAGATTTCAAAAATGATTACAAAACATTATATCCTTGGTACATGGAA 714446 Query 367606 TCTGTTATTTGG-GCATTT--AAACAATTATA---CGAACGCGGTATGATTTTTGAAGGT 367659 ||| |||||| | |||| ||| ||||||| | || || | || | | ||||| Sbjct 714447 TCT---ATTTGGTGGATTTTCAAAGAATTATATAACAAAAGCCTTGTG---TATCAAGGT 714500 Query 367660 TATAAAGTAATGCCATATTCAACTGGTTGTAATACTGCTTTGTCACATTTTGAAGCCAAA 367719 |||||||||||| | ||| |||||||||||||| | |||| |||||||| | Sbjct 714501 GTTAAAGTAATGCCTTTTTCTACTGGTTGTAATACACCGCTGTCTAATTTTGAATCAGGG 714560 Query 367720 CAAAATTATCGAGAAGTAGTTGATCCATC 367748 |||||||| ||| || |||||||| || Sbjct 714561 CAAAATTACAAAGATGTTGTTGATCCTTC 714589 >seq3388 Length=1606789 Score = 161 bits (178), Expect = 8e-34 Identities = 447/676 (66%), Gaps = 16/676 (2%) Strand=Plus/Plus Query 551904 CGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGT--ACTCAAACCA 551961 || || ||||| || ||||| ||||| || || | || | || || || ||| | | Sbjct 136342 CGACTGAGAACAGCCTGCGAGAGAGCGAAGAGAACCCTG--AGCTCGTCCACGCAAGCGA 136399 Query 551962 CTATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCA 552021 ||| ||| | ||||| | || ||||| || |||| |||| | ||| | ||||| Sbjct 136400 GTATCGAAATCGATTCTCTGTTCGAGGGTATCGATTTCTATACTTCCATTACCAGGGCTC 136459 Query 552022 AATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTT 552081 ||| ||||| |||| || ||||| || || | || | ||||| || || | | || Sbjct 136460 GATTCGAAGAACTTTGCTCGGATCTGTTCAGGAGTACCCTAGAACCCGTGGAGAAGGCTT 136519 Query 552082 TAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTA 552141 | || || | ||||| ||||| || |||| || || || || || |||||||| | Sbjct 136520 TGAGGGACGCTAAGATGGATAAGTCTCAAGTTCACAGTATCGTACTAGTCGGTGGATCGA 136579 Query 552142 CAAGAATTCCTAAAATTCGCGAAATGTT--AAGTTCTTATTTCAATGGTAAAAAATTAAA 552199 | ||||| || || |||| || | | ||| ||| || ||| || ||| | || || Sbjct 136580 CTAGAATACCAAAGATTCAAAAATTACTGCAAGA-CTTCTT-CAACGGCAAAGAGTTGAA 136637 Query 552200 TGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCT 552259 || | ||||| || || ||||| |||||||| ||||| | ||||| || || || Sbjct 136638 CAAATCCATCAATCCGGACGAAGCTGTAGCCTATGGAGCCGCTGTGCAAGCTGCCAT-CT 136696 Query 552260 TTCTGG---ACAAA-CTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTC 552315 | | | |||| | || | | ||| || | | | | ||||| || || Sbjct 136697 TGCACGGCGACAAGTCCGAGGCGG---TTCAAGATTTGCTGTTACTGGATGTCACGCCAT 136753 Query 552316 TATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTA 552375 | || || ||| | ||||||| ||| ||| | ||||||| | | ||| | || || || | Sbjct 136754 TGTCCCTGGGTATCGAAACAGCTGGCGGTGTAATGACTACTTTGATCAAGAGGAACACGA 136813 Query 552376 CTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTA 552435 | || || ||| || | | || | || ||||| ||||||||| | | ||| Sbjct 136814 CCATACCGACCAAACAAACGCAAACCTTCACCACCTATTCGGATAATCAACCCGGTGTCT 136873 Query 552436 CAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTT 552495 |||||| | | |||||||||||| | || ||||| |||||| || || | | Sbjct 136874 TGATTCAAGTATACGAAGGAGAAAGAGCCATGACCAAAGACAATAATATTCTAGGAAAAT 136933 Query 552496 TTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCG 552555 | | | |||||||| ||||| ||| | || || || || || ||||||||||||| Sbjct 136934 TCGAGCTTACCGGTATTCCACCTGCGCCTAGAGGGGTTCCTCAGATCGAAGTTACTTTCG 136993 Query 552556 ATATCGATGCCAATGG 552571 |||||||| | || || Sbjct 136994 ATATCGATTCGAACGG 137009 >seq467 Length=2555529 Score = 156 bits (172), Expect = 3e-32 Identities = 168/220 (76%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315 |||||||||||||||||||||||| |||||| |||||||||||| | || || | Sbjct 1364623 GAGACGGAGTACAAGATGAAGGGTTGATTCTTTTTGAATATTGTAATCGGATAACGTGCG 1364682 Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375 | |||||| | |||||| || ||||| || | |||||| ||||| |||||||| ||||| Sbjct 1364683 TCCATCTTCTAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGAGGAATACCTTC 1364742 Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT-ACATTCGAGAG 563434 ||| || |||||||| ||||| |||||| || |||| || | | ||| | | Sbjct 1364743 TTTGTCCTGAATTTTAGCCTTTACATTCTCAATGGTGTCAG-ATGCCTCAACTTCCAAGG 1364801 Query 563435 TAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | | |||||| |||||||| ||||| ||||| || ||||| Sbjct 1364802 TTATAGTTTTTCCAGTAAGGGTTTTCACGAATATCTGCAT 1364841 Score = 150 bits (166), Expect = 1e-30 Identities = 167/220 (76%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315 |||||||||||||||||||||||| |||||| |||||||||||| | || || | Sbjct 1365896 GAGACGGAGTACAAGATGAAGGGTTGATTCTTTTTGAATATTGTAATCGGATAACGTGCG 1365955 Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375 | |||||| | |||||| || ||||| || | |||||| ||||| |||||||| ||||| Sbjct 1365956 TCCATCTTCTAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGAGGAATACCTTC 1366015 Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAG 563434 ||| || |||||||| ||| || ||||||||||| | || | || |||||||| Sbjct 1366016 TTTGTCCTGAATTTTGGCTTTAACATTTTCAATTGTATCTG-ATGCTTCCACTTCGAGAG 1366074 Query 563435 TAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | | || || ||||| | || || ||||| || ||||| Sbjct 1366075 TGATGGTCTTTCCAGTCAATGTCTTTACGAAGATCTGCAT 1366114 Score = 140 bits (154), Expect = 3e-27 Identities = 164/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 563253 CCTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGT 563312 |||||| || ||||| | ||| || ||| |||||| |||||||||||||| || || Sbjct 1364164 CCTGAGTCGAAGTACTAAATGGAGAGTAGATTCTTTCTGAATATTGTAATCAGAAAGTGT 1364223 Query 563313 TCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCC 563372 | |||||| |||||||| || || || || | ||| |||||||| || ||||| || Sbjct 1364224 ACGACCATCTTCCAGTTGTTTACCAGCGAAGATTAATCTCTGCTGATCTGGTGGAATGCC 1364283 Query 563373 TTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAG 563432 |||||| |||||||||||| || || ||||| || |||| | ||| || Sbjct 1364284 TTCTTTGTCTTGAATTTTTGCCTTCACGTTTTCAATAGTGTCAGACGCCTCAACTTCCAG 1364343 Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 ||| | ||||| ||||||||||| || || ||||||||||| Sbjct 1364344 AGTTATGGTTTTTCCAGTAAGAGTCTTCACAAAAATTTGCAT 1364385 Score = 132 bits (146), Expect = 4e-25 Identities = 170/235 (72%), Gaps = 16/235 (7%) Strand=Plus/Plus Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315 |||||||||||||||||||||||| |||||| |||||||||||| | || || | Sbjct 1364970 GAGACGGAGTACAAGATGAAGGGTTGATTCTTTTTGAATATTGTAATCGGATAACGTGCG 1365029 Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375 | |||||| | |||||| || ||||| || | |||||| ||||| |||||||| ||||| Sbjct 1365030 TCCATCTTCTAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGAGGAATACCTTC 1365089 Query 563376 TTT--------------ATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGA 563421 ||| ||| || ||||| ||| || |||||| || || | || Sbjct 1365090 TTTGTGATGCCTTCCTTATCCTGGATTTTAGCTTTAACGTTCTCAATAGTGTCCGA-TGC 1365148 Query 563422 GTACA-TTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | | ||| | ||||| || || || ||||||||||| ||||||||||||||| Sbjct 1365149 CTCAACTTCCAAAGTAATGGTCTTTCCGGTAAGAGTTTTCACGAAAATTTGCATA 1365203 Score = 120 bits (132), Expect = 2e-21 Identities = 160/220 (73%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315 |||||| ||||||||||| || || ||||| ||| || || |||| || || | Sbjct 1365212 GAGACGAAGTACAAGATGGAGTGTCGACTCTTTCTGAATGTTATAGTCAGATAATGTGCG 1365271 Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375 | |||||| | |||||| || |||||||| | || || || || |||||||| ||||| Sbjct 1365272 TCCATCTTCCAATTGTTTGCCAGCAAAAATCAACCTCTGTTGGTCTGGAGGAATACCTTC 1365331 Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT-ACATTCGAGAG 563434 ||| || |||||||| ||||| |||||| || |||| || | | ||| | | Sbjct 1365332 TTTGTCCTGAATTTTAGCCTTTACATTCTCAATGGTGTCAG-ATGCCTCAACTTCCAAGG 1365390 Query 563435 TAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | | |||||| |||||||| ||||| ||||| || ||||| Sbjct 1365391 TTATAGTTTTTCCAGTAAGGGTTTTCACGAATATCTGCAT 1365430 Score = 111 bits (122), Expect = 1e-18 Identities = 165/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 563256 GAGACGGAGTACAAGATGAAGGGTA-CTTTCTTTGGTAATATTGTAATCAGCTAGAGTTC 563314 ||||||||||||||| ||||| ||| || |||| || |||||||| |||| || || | Sbjct 1366352 GAGACGGAGTACAAGGTGAAGTGTAGATTCCTTTTGT-ATATTGTAGTCAGAAAGTGTGC 1366410 Query 563315 TTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTT 563374 | |||||| | |||||| || || || || | ||| |||||||| || || || || | Sbjct 1366411 GTCCATCTTCTAATTGTTTACCAGCGAAGATCAATCTCTGCTGATCTGGTGGGATGCCCT 1366470 Query 563375 CTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT-ACATTCGAGA 563433 ||||||| || |||||| ||| || ||| || || || | || | | ||||| Sbjct 1366471 CTTTATCCTGGATTTTTGCTTTAACATTCTCGATGGTGTCTG-ATGCCTCAACCTCGAGG 1366529 Query 563434 GTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATAGACATCT 563482 || | ||||| || || | || || |||||||| ||||| | |||| Sbjct 1366530 GTTATGGTTTTTCCCGTCAATGTCTTTACGAAAATCTGCATGGTTATCT 1366578 Score = 107 bits (118), Expect = 2e-17 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315 ||||||||| || ||||||||||| |||||| ||||| ||||||| || || | Sbjct 1365440 GAGACGGAGAACGAGATGAAGGGTTGATTCTTTTTGGATATTATAATCAGAAAGTGTACG 1365499 Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375 | |||||| | ||| || || ||||| || | ||| ||||| || ||||| || ||||| Sbjct 1365500 TCCATCTTCCAATTGCTTGCCAGCAAAGATTAATCTCTGCTGGTCTGGAGGGATACCTTC 1365559 Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGT 563435 || || || ||||| ||| || ||||| || || | | ||| | || Sbjct 1365560 CTTGTCCTGGATTTTAGCTTTCACATTTTCAATGGTGTCTGACGCCTCAACTTCCAAGGT 1365619 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | |||||| |||||||| ||||| ||||| || ||||| Sbjct 1365620 TATAGTTTTTCCAGTAAGGGTTTTCACGAATATCTGCAT 1365658 Score = 107 bits (118), Expect = 2e-17 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315 ||||||||| || ||||||||||| |||||| ||||| ||||||| || || | Sbjct 1365668 GAGACGGAGAACGAGATGAAGGGTTGATTCTTTTTGGATATTATAATCAGAAAGTGTACG 1365727 Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375 | |||||| | ||| || || ||||| || | ||| ||||| || ||||| || ||||| Sbjct 1365728 TCCATCTTCCAATTGCTTGCCAGCAAAGATTAATCTCTGCTGGTCTGGAGGGATACCTTC 1365787 Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGT 563435 || || || ||||| ||| || ||||| ||||| | | ||| | || Sbjct 1365788 CTTGTCCTGGATTTTAGCTTTCACGTTTTCAATGGTATCGGACGCCTCAACTTCCAATGT 1365847 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | ||||| |||||||| ||||| ||||| || ||||| Sbjct 1365848 TATTGTTTTTCCAGTAAGTGTTTTTACGAAGATCTGCAT 1365886 Score = 105 bits (116), Expect = 5e-17 Identities = 157/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||||||||||||||| || || ||||| ||| ||||| |||| ||| || | Sbjct 1364396 AGACGGAGTACAAGATGGAGTGTTGACTCTTTCTGAATGTTGTAGTCAGATAGTGTGCGC 1364455 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 |||||| | || || || || || || | ||||||||| || || || || |||||| Sbjct 1364456 CCATCTTCTAACTGCTTACCAGCGAAGATCAATCTTTGCTGGTCTGGGGGGATGCCTTCT 1364515 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT-ACATTCGAGAGT 563435 ||||| || ||||| || || |||||| || || | || | | ||| | ||| Sbjct 1364516 TTATCCTGGATTTTAGCCTTAACGTTCTCAATAGTGTCTG-ATGCCTCAACTTCCAAAGT 1364574 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 || || || |||||||||||||| || || || |||||| Sbjct 1364575 AATGGTCTTTCCAGTAAGAGTTTTCACAAAGATCTGCATA 1364614 >seq31 Length=2718342 Score = 122 bits (134), Expect = 7e-22 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 552366 AGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAA 552425 ||||||||| ||||| |||||||| | | || |||||| |||||||||||| Sbjct 1222368 AGAAATACTGTCATTCCGACGAAAAAATCGCAAATTTTCTCTACGGCGTCAGATAATCAA 1222427 Query 552426 ACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAA 552485 | | ||||| || ||| | | |||||| ||| | | | || ||||| ||| ||| Sbjct 1222428 CATACCGTTACGATCCAAGTATATGAAGGTGAACGTCCAATGACAAAAGACAATCATCTT 1222487 Query 552486 CTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAA 552545 ||||||| || || | |||||||| || || ||||| ||| |||| ||||||||| Sbjct 1222488 CTTGGTAAATTCGATCTTACTGGTATTCCACCGGCACCTCGAGGAATACCACAAATTGAA 1222547 Query 552546 GTTACTTTCGATATCGATGCCAATGGAATT 552575 || |||||||| || ||||| ||||| ||| Sbjct 1222548 GTCACTTTCGAAATTGATGCTAATGGTATT 1222577 Score = 113 bits (124), Expect = 4e-19 Identities = 178/251 (71%), Gaps = 8/251 (3%) Strand=Plus/Plus Query 552112 TACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAAT-GTTA 552170 || |||||||||| |||||||| |||||||| |||||||| ||| ||| | | |||| Sbjct 1222031 TAGATGAAATTGTACTTGTTGGAGGATCTACTAGAATTCCAAAAGTTCAACAGTTAGTTA 1222090 Query 552171 AGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCC 552230 | || ||| |||||| || | | | || | || || || || |||||||| Sbjct 1222091 AAGAATTCTTTGGC-GGTAAAGAACCATCTCGAGGTATAAACCCCGACGAAGCTGTTGCA 1222149 Query 552231 TATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAAACTGATGAAAAACTACAAAAT 552290 |||||||| || | || |||| | | || || ||| | || |||| | | | Sbjct 1222150 TATGGTGCTGCTGTGCAGGCAGGTGTACTGTCCGGAGAG---GACGAAACAG---AGGCT 1222203 Query 552291 ATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATG 552350 ||||||||| | ||||||| ||| || || | ||| | ||||||||||||||| | ||| Sbjct 1222204 ATTGTACTTCTTGATGTTAATCCACTTACTATGGGTATCGAAACAGTTGGAGGTGTGATG 1222263 Query 552351 ACTAATCTTAT 552361 ||||| ||||| Sbjct 1222264 ACTAAACTTAT 1222274 Score = 100 bits (110), Expect = 2e-15 Identities = 271/409 (66%), Gaps = 7/409 (2%) Strand=Plus/Plus Query 550028 GTTGGTGTTTGGCAAAATGGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACT 550087 ||||| |||| ||||||| | | ||||| || |||||||||||||| || |||| | Sbjct 1220928 GTTGGAGTTTACAAAAATGGAAGGGCAGAAATAATAGCCAATGATCAAGGAAATAGAATT 1220987 Query 550088 ACTCCATCTTATGTTTCTTTCA---CGGAAACTGAACATTTAGTTGGTGATGCAGCAAAA 550144 ||||| || ||||| | || | | || ||||| ||| |||| ||||||||||| Sbjct 1220988 ACTCCTTCATATGTGGCATTTACTTCTGATGGTGAACGCTTAATTGGAGATGCAGCAAAG 1221047 Query 550145 TATCAAGCCACTGGTAATCCTACCAATACTATTTTTGATGCTAAACGTTTAATTGG-AAG 550203 |||| || ||||| ||||| |||||||||| ||| | |||||||| | | Sbjct 1221048 AATCAGTTAACAACAAATCCAGAAAATACAGTTTTTGATGCCAAAAGGTTAATTGGTAGG 1221107 Query 550204 AAGTTTTAATGATTCGACTGTTCAGGCAGATATGAAGCATTGGCCTTTCCAAATTGTTAA 550263 | | | | ||| | || || || ||||| ||| | || || || | || | Sbjct 1221108 GAATGGTCA-GATCCTACGGTACAACATGATATTAAGTTCTTCCCATTTAAAGTAATTGA 1221166 Query 550264 TGTTTCTGGAAAACCTTATATTGAAGCTACTCATGA-AGGATCTGTTAAACAATTTTCAC 550322 | ||||| |||| || || | || | || | ||| |||| ||| Sbjct 1221167 AAAGAATAACAAACCACATATAAGAG-TATTGATCAGTGGTGAAGAAAAAATATTTGCAC 1221225 Query 550323 CAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTG 550382 ||||| |||| ||| |||||||| | ||||||||| |||| || || | | | | Sbjct 1221226 CAGAAGAAATCTCAGCTATGGTTCTTGGTAAAATGAAAGAAACTGCTGAGGCATATTTGG 1221285 Query 550383 GTCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGA 550431 | || ||||||| |||| || | |||||||| || || |||||||| Sbjct 1221286 GCAAAAAAGTTACCCATGCTGTTGTTACTGTACCTGCTTACTTTAATGA 1221334 >seq321 Length=1097274 Score = 120 bits (132), Expect = 2e-21 Identities = 138/183 (75%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 563293 ATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTT 563352 ||||| ||||||| || || | | |||||| | ||||||||| || ||||| || | Sbjct 785279 ATATTATAATCAGAGAGGGTACGTCCATCTTCTAATTGTTTTCCAGCGAAAATTAGACGC 785338 Query 563353 TGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTA 563412 || |||||||| |||||||||||||||||||||||||| |||||| || || ||| Sbjct 785339 TGTTGATCAGGTGGAATTCCTTCTTTATCTTGAATTTTAGCTTTTACATTTTCGATGGTA 785398 Query 563413 TCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTG 563471 |||| | ||| ||||| || | |||||| || || | |||||| ||||| || || Sbjct 785399 TCAGACGCTTCTAC-CTCGAGCGTGATAGTTTTGCCCGTCAAAGTTTTCACGAATATCTG 785457 Query 563472 CAT 563474 ||| Sbjct 785458 CAT 785460 >seq307 Length=2169461 Score = 120 bits (132), Expect = 2e-21 Identities = 154/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 563266 ACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCA 563325 || |||||||| || |||||| ||| |||||||||| || || ||| ||||||| Sbjct 1515424 ACCAGATGAAGTGTGGATTCTTTTTGAATGTTGTAATCAGAGAGTGTCCTTCCATCTTCA 1515365 Query 563326 AGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGA 563385 |||||||| || ||||| || | || |||||||| ||| |||||||| ||||| || || Sbjct 1515364 AGTTGTTTCCCAGCAAAGATTAATCGTTGCTGATGAGGGGGAATTCCCTCTTTGTCCTGG 1515305 Query 563386 ATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTTT 563444 || ||| ||||| |||||||| |||| | || ||| ||||| | ||||| Sbjct 1515304 ATCTTTGCCTTTACATTTTCAATTGTGTCAGAAGCTTCGAC-TTCCAGAGTGATGGTTTT 1515246 Query 563445 ACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || || || || || || || |||||||| Sbjct 1515245 CCCTGTGAGTGTCTTGACAAAGATTTGCAT 1515216 Score = 120 bits (132), Expect = 2e-21 Identities = 156/213 (73%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 563263 AGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCT 563322 || || ||||||||||| |||||| ||| || ||||| | || || || |||| Sbjct 1515655 AGAACCAGATGAAGGGTGGATTCTTTTTGAATGTTATAATCTGACAGTGTCCTCCCATCT 1515596 Query 563323 TCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCT 563382 || || || ||||| ||||| || | || |||||| || ||||||||||||||||| ||| Sbjct 1515595 TCGAGCTGCTTTCCTGCAAAGATTAATCGTTGCTGGTCTGGAGGAATTCCTTCTTTGTCT 1515536 Query 563383 TGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAACAGT 563441 || || || ||| || ||| ||||| || | | | | || ||| || || | ||| Sbjct 1515535 TGGATCTTAGCTTTGACATTCTCTATTGTGTCTGAG-GCTTCCACTTCTAGGGTGATAGT 1515477 Query 563442 TTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 ||| || || ||||| || ||||| |||||||| Sbjct 1515476 TTTCCCTGTGAGAGTCTTCACGAAGATTTGCAT 1515444 Score = 116 bits (128), Expect = 3e-20 Identities = 155/213 (73%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 563263 AGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCT 563322 || || |||||||| || |||||| ||| || ||||| | || || ||| |||| Sbjct 1510758 AGAACCAGATGAAGTGTGGATTCTTTTTGAATGTTATAATCTGACAGTGTCCTTCCATCT 1510699 Query 563323 TCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCT 563382 || || || || || ||||| || | || |||||| || ||||||||||||||||| ||| Sbjct 1510698 TCGAGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGAGGAATTCCTTCTTTGTCT 1510639 Query 563383 TGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAACAGT 563441 || || || ||| || ||| ||||| || | | | | || ||| || || | ||| Sbjct 1510638 TGGATCTTAGCTTTGACATTCTCTATTGTGTCTGAG-GCTTCCACTTCTAGGGTGATAGT 1510580 Query 563442 TTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 ||| || || ||||| || ||||| |||||||| Sbjct 1510579 TTTCCCTGTGAGAGTCTTCACGAAGATTTGCAT 1510547 Score = 116 bits (128), Expect = 3e-20 Identities = 155/213 (73%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 563263 AGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCT 563322 || ||||| ||||| || |||||| |||||| ||||| | || || ||| |||| Sbjct 1514736 AGCACAAGGTGAAGTGTTGATTCTTTTTGAATATTATAATCTGAAAGTGTCCTTCCATCT 1514677 Query 563323 TCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCT 563382 || || || ||||| ||||| || | || ||||||||||||||||||||||||||||||| Sbjct 1514676 TCCAGCTGCTTTCCAGCAAAGATTAATCGTTGCTGATCAGGAGGAATTCCTTCTTTATCT 1514617 Query 563383 TGAATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGT 563441 || || || ||| || ||| || ||||| | | || ||| || || | || Sbjct 1514616 TGGATCTTAGCTTTGACATTCTCTATCGTATCTGAAGCTTCGAC-TTCCAGGGTGATGGT 1514558 Query 563442 TTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 ||| || || || || || || || |||||||| Sbjct 1514557 TTTCCCTGTGAGTGTCTTGACAAAGATTTGCAT 1514525 >seq113 Length=1773990 Score = 116 bits (128), Expect = 3e-20 Identities = 139/189 (74%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 550349 ATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATA 550408 ||||||||||| |||||||| | | | | || | ||| | |||| ||||| Sbjct 550116 ATGAAAATGAAGGAAACAGCCGAATCGTATTTAAGTACATCAGTAAAAAATGCCGTAATT 550057 Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 ||||| || || ||||| || || || ||| | |||||||| || |||||||| | ||| Sbjct 550056 ACTGTTCCCGCGTATTTCAACGATTCCCAAAGACAAGCTACCAAGGATGCTGGTCAAATT 549997 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528 || ||||||||||| ||| | | ||||| ||||| || || || || ||||||||||| Sbjct 549996 GCCGGACTTAATGTACTTAGAGTAATCAACGAACCAACAGCAGCCGCCCTTGCATATGGC 549937 Query 550529 CTTGATAAA 550537 | |||||| Sbjct 549936 ATGGATAAA 549928 >seq140 Length=2205453 Score = 87.8 bits (96), Expect = 1e-11 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 394007 GTCACAATTTCATCAAATGTTAAATTCATTGCAATAATTTGTGGTAGTCCCACTTCATTA 394066 |||||||||||| ||||||||||||| |||||| || || | || |||| || | Sbjct 612777 GTCACAATTTCAGGAAATGTTAAATTCTGGGCAATACTTCTAGGCACACCTACTTGATCA 612718 Query 394067 AGAGCAATATTTGGATCCGAGGTAATAACTGTACGACCTGACATATCCACACGTTTTCCC 394126 | | ||| ||||| | ||||| || |||||| | || | || |||||||| ||| Sbjct 612717 ATTCGTAAATTGGGATCTGGTGTAATGACAGTACGAGCAGAAAAGTCGACACGTTTACCC 612658 Query 394127 ATAAGATTTCCACGAATTCTACCTTCTTTACCT 394159 || | ||||| | ||||| |||||||| ||| Sbjct 612657 ATCAAGTTTCCTCTTATTCTTCCTTCTTTTCCT 612625 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4028964625660340