Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19] 6,266 sequences; 272,660,569 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq74 87.8 2e-12 >seq74 Length=2873443 Score = 87.8 bits (96), Expect = 2e-12 Identities = 137/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 197089 TAACAGGCGAGTAAGAAAGCGCCGTAGGTTCCCGTTCTCTTTCCCACCCCGTTGAAGCCT 197148 ||||| || | | ||| | ||||| |||||||||| || || || | | || Sbjct 2826442 TAACAAGCCAAAAGGAATCCTCCGTACGTTCCCGTTCGTTTACCTTTTCCTATATAACCA 2826501 Query 197149 CCGATAACCACCAGATCCAGAGTGTCGCACACCCCTTCCATGTAATCTTTCTTCAGTTTG 197208 || ||||| |||| ||||| || || | || || || | ||||||||||||||||| Sbjct 2826502 CCAATAACGACCACATCCAATGTATCACCTACACCATCTAAATAATCTTTCTTCAGTTTT 2826561 Query 197209 AGCCAGCTTCTAGATCTCTTGGCAATCTCGTAGGTTGCGTTTACGTCCAGGGTCTTGATC 197268 | ||| ||| ||| | || ||||| ||||| ||||| | | |||| ||||| | | Sbjct 2826562 AACCAATTTCGAGAACGTTTCGCAATTTCGTATGTTGCATCTTGTTCCAATGTCTTCACC 2826621 Query 197269 ATCAATCCCTCGCAAT 197284 || | |||||||||| Sbjct 2826622 ATTAGACCCTCGCAAT 2826637 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676676595154080