Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19] 6,266 sequences; 272,660,569 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq35 98.7 2e-15 >seq35 Length=4111758 Score = 98.7 bits (108), Expect = 2e-15 Identities = 105/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 241489 CTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCA 241548 |||||||| ||| || || ||||| |||| | |||||| |||| |||||| | |||||| Sbjct 3033898 CTTGAGCAGCTTAACCTTGTCCTCGAGCCTGGAGATGCGCTCCAATTTGCGTCTGCGGCA 3033957 Query 241549 TTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTC 241608 ||||| || |||| ||| |||| | | || | ||| |||||| | ||||||| Sbjct 3033958 TTTGGACGCCGCCACGCGATTCCTCTGACGTTTCCTCTCCAGCTTGATCCTCTCCTGGTT 3034017 Query 241609 CTCCATGTCGATCGGAGAC 241627 |||||||||||| || ||| Sbjct 3034018 CTCCATGTCGATGGGCGAC 3034036 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931459837693440