Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19]
6,266 sequences; 272,660,569 total letters
Query= NC_019945.1
Length=132978
Score E
Sequences producing significant alignments: (Bits) Value
seq307 116 3e-21
seq467 96.9 3e-15
seq459 87.8 2e-12
>seq307
Length=2169461
Score = 116 bits (128), Expect = 3e-21
Identities = 166/234 (71%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 28550 AAAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACC 28609
||| ||||| || ||||| || ||| | || || || ||||| ||| ||| ||| |
Sbjct 1509631 AAATATGCAGATCTTTGTCAAGACACTTACAGGGAAGACCATCACCCTGGAAGTCGAAGC 1509690
Query 28610 TTCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGA 28669
|||||| ||| | | || ||||| || ||| |||||||||||| | || |||
Sbjct 1509691 TTCAGATACGATAGAGAATGTCAAGGCGAAGATCCAGGACAAAGAGGGAATCCCTCCAGA 1509750
Query 28670 TCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTA 28729
|| || || | |||||||| || || || | |||||| | || || | |||||
Sbjct 1509751 CCAGCAACGATTAATCTTTGCAGGGAAGCAGCTCGAAGATGGAAGGACACTGTCAGATTA 1509810
Query 28730 TAACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
|||||||||||||||||| || || || |||| ||||| | |||||||| ||
Sbjct 1509811 TAACATTCAAAAAGAATCCACACTTCATCTGGTTCTAAGACTTCGAGGAGGAAT 1509864
Score = 111 bits (122), Expect = 1e-19
Identities = 163/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612
||||||||| ||||| || ||| | || || |||||||| || ||| ||| ||||
Sbjct 1515215 AATGCAAATCTTTGTCAAGACACTCACAGGGAAAACCATCACTCTGGAAGTCGAAGCTTC 1515274
Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672
|| || | | || | ||| ||| ||| |||||||||||| | ||| ||||
Sbjct 1515275 TGACACAATTGAAAATGTAAAGGCAAAGATCCAGGACAAAGAGGGAATTCCCCCTCATCA 1515334
Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732
|| || | |||||||| || |||||| | |||||| | || | | ||||| ||
Sbjct 1515335 GCAACGATTAATCTTTGCTGGGAAACAACTTGAAGATGGAAGGACACTCTCTGATTACAA 1515394
Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
||||||||||||||| || || || |||| || ||| | |||||||| ||
Sbjct 1515395 CATTCAAAAAGAATCCACACTTCATCTGGTTTTGAGACTTCGAGGAGGAAT 1515445
Score = 102 bits (112), Expect = 7e-17
Identities = 161/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612
||||||||| || || || ||| | || || |||||||| || ||| ||| ||||
Sbjct 1509862 AATGCAAATCTTCGTGAAGACACTCACAGGGAAAACCATCACTCTGGAAGTCGAAGCTTC 1509921
Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672
|| || | | || | ||| || ||| |||||||||||| | || ||| ||
Sbjct 1509922 TGACACAATTGAAAATGTAAAGGCGAAGATCCAGGACAAAGAGGGAATCCCTCCAGACCA 1509981
Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732
|| || | |||||||| || || || | |||||| | || || | ||||||||
Sbjct 1509982 GCAACGATTAATCTTTGCAGGGAAGCAGCTCGAAGATGGAAGGACACTGTCAGATTATAA 1510041
Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
||||||||||||||| || || || |||| ||||| | |||||||| ||
Sbjct 1510042 CATTCAAAAAGAATCCACACTTCATCTGGTTCTAAGACTTCGAGGAGGAAT 1510092
Score = 102 bits (112), Expect = 7e-17
Identities = 161/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612
||||||||| || || || || | || || |||||||| ||| ||| ||| ||||
Sbjct 1510090 AATGCAAATCTTCGTCAAGACTCTCACAGGAAAAACCATCACCCTGGAAGTCGAAGCTTC 1510149
Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672
|| || | | || | ||| || ||| |||||||||||| | || ||| ||
Sbjct 1510150 TGACACAATTGAAAATGTAAAGGCGAAGATCCAGGACAAAGAGGGAATCCCTCCAGACCA 1510209
Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732
|| || | |||||||| || || || | |||||| | || || | ||||||||
Sbjct 1510210 GCAACGATTAATCTTTGCAGGGAAGCAGCTCGAAGATGGAAGGACACTGTCAGATTATAA 1510269
Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
||||||||||||||| || || || |||| ||||| | |||||||| ||
Sbjct 1510270 CATTCAAAAAGAATCCACACTTCATCTGGTTCTAAGACTTCGAGGAGGAAT 1510320
Score = 102 bits (112), Expect = 7e-17
Identities = 161/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612
||||||||| || || || || | || || |||||||| ||| ||| ||| ||||
Sbjct 1510318 AATGCAAATCTTCGTCAAGACTCTCACAGGAAAAACCATCACCCTGGAAGTCGAAGCTTC 1510377
Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672
|| || | | || | ||| || ||| |||||||||||| | || ||| ||
Sbjct 1510378 TGACACAATTGAAAATGTAAAGGCGAAGATCCAGGACAAAGAGGGAATCCCTCCAGACCA 1510437
Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732
|| || | |||||||| || || || | |||||| | || || | ||||||||
Sbjct 1510438 GCAACGATTAATCTTTGCAGGGAAGCAGCTCGAAGATGGAAGGACACTGTCAGATTATAA 1510497
Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
||||||||||||||| || || || |||| ||||| | |||||||| ||
Sbjct 1510498 CATTCAAAAAGAATCCACACTTCATCTGGTTCTAAGACTTCGAGGAGGAAT 1510548
Score = 102 bits (112), Expect = 7e-17
Identities = 161/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612
||||||||| ||||| || ||| | || || |||||||| ||| ||| ||| ||||
Sbjct 1514524 AATGCAAATCTTTGTCAAGACACTCACAGGGAAAACCATCACCCTGGAAGTCGAAGCTTC 1514583
Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672
||| ||| | | || |||| || ||| || ||||| ||| | || |||||
Sbjct 1514584 AGATACGATAGAGAATGTCAAAGCTAAGATCCAAGATAAAGAAGGAATTCCTCCTGATCA 1514643
Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732
|| || | |||||||| || || || |||||||| | || | | ||||||||
Sbjct 1514644 GCAACGATTAATCTTTGCTGGAAAGCAGCTGGAAGATGGAAGGACACTTTCAGATTATAA 1514703
Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
|||||||||||||| || || ||| | || | ||| | |||||||| ||
Sbjct 1514704 TATTCAAAAAGAATCAACACTTCACCTTGTGCTGAGACTTCGAGGAGGAAT 1514754
Score = 102 bits (112), Expect = 7e-17
Identities = 161/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612
||||||||| || || || || | || || |||||||| ||| ||| ||| ||||
Sbjct 1514752 AATGCAAATCTTCGTCAAGACTCTCACAGGAAAAACCATCACCCTGGAAGTCGAAGCTTC 1514811
Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672
|| || | | || | ||| || ||| |||||||||||| | || ||| ||
Sbjct 1514812 TGACACAATTGAAAATGTAAAGGCGAAGATCCAGGACAAAGAGGGAATCCCTCCAGACCA 1514871
Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732
|| || | |||||||| || || || | |||||| | || || | ||||||||
Sbjct 1514872 GCAACGATTAATCTTTGCAGGGAAGCAGCTCGAAGATGGAAGGACACTGTCAGATTATAA 1514931
Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
||||||||||||||| || || || |||| ||||| | |||||||| ||
Sbjct 1514932 CATTCAAAAAGAATCCACACTTCATCTGGTTCTAAGACTTCGAGGAGGAAT 1514982
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612
||||||||| || || || || | || || ||||| || ||| ||| |||| | ||
Sbjct 1510546 AATGCAAATCTTCGTGAAGACTCTCACAGGGAAAACTATCACCCTAGAAGTGGAAGCCTC 1510605
Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672
||| || | | || |||| || ||| |||||||| ||| | || ||| ||
Sbjct 1510606 AGACACAATAGAGAATGTCAAAGCTAAGATCCAAGACAAAGAAGGAATTCCTCCAGACCA 1510665
Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732
|| || | |||||||| || || || | |||||| | || || | ||||||||
Sbjct 1510666 GCAACGATTAATCTTTGCAGGGAAGCAGCTCGAAGATGGAAGGACACTGTCAGATTATAA 1510725
Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
||||||||||||||| || || || |||| ||||| | |||||||| ||
Sbjct 1510726 CATTCAAAAAGAATCCACACTTCATCTGGTTCTAAGACTTCGAGGAGGAAT 1510776
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612
||||||||| || || || || | || || ||||| || ||| ||| |||| | ||
Sbjct 1515443 AATGCAAATCTTCGTGAAGACTCTCACAGGGAAAACTATCACCCTAGAAGTGGAAGCCTC 1515502
Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672
||| || | | || |||| || ||| |||||||| ||| | || ||| ||
Sbjct 1515503 AGACACAATAGAGAATGTCAAAGCTAAGATCCAAGACAAAGAAGGAATTCCTCCAGACCA 1515562
Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732
|| || | |||||||| || || || | |||||| | || || | ||||||||
Sbjct 1515563 GCAACGATTAATCTTTGCAGGAAAGCAGCTCGAAGATGGGAGGACACTGTCAGATTATAA 1515622
Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
||||||||||||||| || || || |||| ||||| | |||||||| ||
Sbjct 1515623 CATTCAAAAAGAATCCACCCTTCATCTGGTTCTAAGACTTCGAGGAGGAAT 1515673
Score = 87.8 bits (96), Expect = 2e-12
Identities = 158/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612
||||||||| || || || || | || || |||||||| ||| ||| ||| ||||
Sbjct 1515671 AATGCAAATCTTCGTCAAGACTCTCACAGGAAAAACCATCACCCTGGAAGTCGAAGCTTC 1515730
Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672
|| || | | || |||| || ||| |||||||||||| | || ||||||
Sbjct 1515731 TGACACAATAGAGAATGTCAAAGCTAAGATCCAGGACAAAGAGGGAATACCTCCAGATCA 1515790
Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732
|| || | |||||||| || || || | |||||| | || | | ||||| ||
Sbjct 1515791 GCAACGATTAATCTTTGCAGGAAAGCAGCTCGAAGATGGGAGGACACTCTCTGATTACAA 1515850
Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
||||||||||||||| || || || |||| | ||| | || ||||| ||
Sbjct 1515851 CATTCAAAAAGAATCCACACTTCATCTGGTTCTGAGACTTCGGGGAGGAAT 1515901
Score = 82.4 bits (90), Expect = 6e-11
Identities = 163/240 (68%), Gaps = 11/240 (5%)
Strand=Plus/Plus
Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612
||||||||| || || || || | || || |||||||| ||| ||| ||| ||||
Sbjct 1514980 AATGCAAATCTTCGTCAAGACTCTCACAGGAAAAACCATCACCCTGGAAGTCGAAGCTTC 1515039
Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672
|| || | | || | ||| ||| ||| |||||||||||| | || ||| ||
Sbjct 1515040 TGACACAATTGAAAATGTAAAGGCAAAGATCCAGGACAAAGAGGGAATCCCTCCAGACCA 1515099
Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--------TCT-AAAACTATGGC 28723
|| || | |||||||| || || || | |||||| || || ||| | |
Sbjct 1515100 GCAACGATTAATCTTTGCAGGGAAGCAGCTCGAAGATGGAAGGACACTCAACACTCT--C 1515157
Query 28724 CGATTATAACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
|||||||| |||||||||||||| || || ||| | || | ||| | |||||||| ||
Sbjct 1515158 AGATTATAATATTCAAAAAGAATCAACACTTCACCTTGTGCTGAGACTTCGAGGAGGAAT 1515217
>seq467
Length=2555529
Score = 96.9 bits (106), Expect = 3e-15
Identities = 146/205 (71%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612
|||||| || || ||||| ||||| || || || ||||| || |||| |||| | ||
Sbjct 1366115 AATGCAGATCTTCGTAAAGACATTGACTGGAAAGACCATCACTCTCGAAGTGGAAGCATC 1366056
Query 28613 AGAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATC 28671
||| || | | || | || || |||| || |||||||| || | || |||||
Sbjct 1366055 AGATACAATTGAAAATGTTAAAGCCAAAATTCAG-GACAAAGAAGGTATTCCTCCAGATC 1365997
Query 28672 AACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATA 28731
|||| ||| | |||||||| || |||||||| |||||| || | ||||||| |
Sbjct 1365996 AACAAAGATTGATCTTTGCTGGTAAACAATTAGAAGATGGACGCACGTTATCCGATTACA 1365937
Query 28732 ACATTCAAAAAGAATCTACTCTGCA 28756
| |||||||||||||| || || ||
Sbjct 1365936 ATATTCAAAAAGAATCAACCCTTCA 1365912
Score = 93.3 bits (102), Expect = 4e-14
Identities = 148/208 (71%), Gaps = 6/208 (3%)
Strand=Plus/Minus
Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612
|||||| || || ||||| ||||| || || || ||||| || ||| ||| | ||
Sbjct 1366343 AATGCAGATCTTCGTAAAGACATTGACTGGAAAGACCATCACTCTTGAAGTTGAAGCCTC 1366284
Query 28613 AGAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATC 28671
||| || | | || | || || |||| || || |||||||| | || ||| |
Sbjct 1366283 AGACACTATTGAAAATGTTAAAGCTAAAATTCAG-GATAAAGAGGGTATTCCTCCAGACC 1366225
Query 28672 AACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCTAAAACTATGGCCGATTA 28729
|||| ||||| ||||| || |||||||||||||||||| | | | ||| | || ||
Sbjct 1366224 AACAAAGACTGATCTTCGCTGGCAAACAATTGGAAGATGGACGCACATTAT--CTGACTA 1366167
Query 28730 TAACATTCAAAAAGAATCTACTCTGCAC 28757
|| |||||||| ||||||||||| |||
Sbjct 1366166 CAATATTCAAAAGGAATCTACTCTTCAC 1366139
Score = 82.4 bits (90), Expect = 6e-11
Identities = 143/206 (69%), Gaps = 4/206 (2%)
Strand=Plus/Minus
Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612
||||||||| ||||| || || | || || |||||||| || ||| || | ||
Sbjct 1364386 AATGCAAATTTTTGTGAAGACTCTTACTGGAAAAACCATAACTCTGGAAGTTGAGGCGTC 1364327
Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672
|| || | | | | ||| |||||| |||||||| || | || ||||||
Sbjct 1364326 TGACACTATTGAAAACGTGAAGGCAAAAATTCAAGACAAAGAAGGCATTCCACCAGATCA 1364267
Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCTAAAACTATGGCCGATTAT 28730
|||||| | ||||| || || |||||| |||||||| || | ||| | | |||||
Sbjct 1364266 GCAGAGATTAATCTTCGCTGGTAAACAACTGGAAGATGGTCGTACACTTT--CTGATTAC 1364209
Query 28731 AACATTCAAAAAGAATCTACTCTGCA 28756
|| ||||| |||||||||||||| ||
Sbjct 1364208 AATATTCAGAAAGAATCTACTCTCCA 1364183
>seq459
Length=558815
Score = 87.8 bits (96), Expect = 2e-12
Identities = 87/113 (77%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 28668 GATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGAT 28727
|| ||||| ||| | || ||||| || || |||||||||||| || |||| || | |||
Sbjct 439489 GACCAACAAAGATTAATTTTTGCTGGAAAGCAATTGGAAGATGGTAGAACTCTGTCAGAT 439430
Query 28728 TATAACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780
||||| |||||||| |||||||| |||| | || ||| | ||| |||| ||
Sbjct 439429 TATAATATTCAAAAGGAATCTACATTGCATTTAGTCTTACGTTTAAGAGGTGG 439377
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425372313164814
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |