Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19] 6,266 sequences; 272,660,569 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq307 116 3e-21 seq467 96.9 3e-15 seq459 87.8 2e-12 >seq307 Length=2169461 Score = 116 bits (128), Expect = 3e-21 Identities = 166/234 (71%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 28550 AAAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACC 28609 ||| ||||| || ||||| || ||| | || || || ||||| ||| ||| ||| | Sbjct 1509631 AAATATGCAGATCTTTGTCAAGACACTTACAGGGAAGACCATCACCCTGGAAGTCGAAGC 1509690 Query 28610 TTCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGA 28669 |||||| ||| | | || ||||| || ||| |||||||||||| | || ||| Sbjct 1509691 TTCAGATACGATAGAGAATGTCAAGGCGAAGATCCAGGACAAAGAGGGAATCCCTCCAGA 1509750 Query 28670 TCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTA 28729 || || || | |||||||| || || || | |||||| | || || | ||||| Sbjct 1509751 CCAGCAACGATTAATCTTTGCAGGGAAGCAGCTCGAAGATGGAAGGACACTGTCAGATTA 1509810 Query 28730 TAACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 |||||||||||||||||| || || || |||| ||||| | |||||||| || Sbjct 1509811 TAACATTCAAAAAGAATCCACACTTCATCTGGTTCTAAGACTTCGAGGAGGAAT 1509864 Score = 111 bits (122), Expect = 1e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 ||||||||| ||||| || ||| | || || |||||||| || ||| ||| |||| Sbjct 1515215 AATGCAAATCTTTGTCAAGACACTCACAGGGAAAACCATCACTCTGGAAGTCGAAGCTTC 1515274 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | || | ||| ||| ||| |||||||||||| | ||| |||| Sbjct 1515275 TGACACAATTGAAAATGTAAAGGCAAAGATCCAGGACAAAGAGGGAATTCCCCCTCATCA 1515334 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 || || | |||||||| || |||||| | |||||| | || | | ||||| || Sbjct 1515335 GCAACGATTAATCTTTGCTGGGAAACAACTTGAAGATGGAAGGACACTCTCTGATTACAA 1515394 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 ||||||||||||||| || || || |||| || ||| | |||||||| || Sbjct 1515395 CATTCAAAAAGAATCCACACTTCATCTGGTTTTGAGACTTCGAGGAGGAAT 1515445 Score = 102 bits (112), Expect = 7e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 ||||||||| || || || ||| | || || |||||||| || ||| ||| |||| Sbjct 1509862 AATGCAAATCTTCGTGAAGACACTCACAGGGAAAACCATCACTCTGGAAGTCGAAGCTTC 1509921 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | || | ||| || ||| |||||||||||| | || ||| || Sbjct 1509922 TGACACAATTGAAAATGTAAAGGCGAAGATCCAGGACAAAGAGGGAATCCCTCCAGACCA 1509981 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 || || | |||||||| || || || | |||||| | || || | |||||||| Sbjct 1509982 GCAACGATTAATCTTTGCAGGGAAGCAGCTCGAAGATGGAAGGACACTGTCAGATTATAA 1510041 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 ||||||||||||||| || || || |||| ||||| | |||||||| || Sbjct 1510042 CATTCAAAAAGAATCCACACTTCATCTGGTTCTAAGACTTCGAGGAGGAAT 1510092 Score = 102 bits (112), Expect = 7e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 ||||||||| || || || || | || || |||||||| ||| ||| ||| |||| Sbjct 1510090 AATGCAAATCTTCGTCAAGACTCTCACAGGAAAAACCATCACCCTGGAAGTCGAAGCTTC 1510149 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | || | ||| || ||| |||||||||||| | || ||| || Sbjct 1510150 TGACACAATTGAAAATGTAAAGGCGAAGATCCAGGACAAAGAGGGAATCCCTCCAGACCA 1510209 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 || || | |||||||| || || || | |||||| | || || | |||||||| Sbjct 1510210 GCAACGATTAATCTTTGCAGGGAAGCAGCTCGAAGATGGAAGGACACTGTCAGATTATAA 1510269 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 ||||||||||||||| || || || |||| ||||| | |||||||| || Sbjct 1510270 CATTCAAAAAGAATCCACACTTCATCTGGTTCTAAGACTTCGAGGAGGAAT 1510320 Score = 102 bits (112), Expect = 7e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 ||||||||| || || || || | || || |||||||| ||| ||| ||| |||| Sbjct 1510318 AATGCAAATCTTCGTCAAGACTCTCACAGGAAAAACCATCACCCTGGAAGTCGAAGCTTC 1510377 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | || | ||| || ||| |||||||||||| | || ||| || Sbjct 1510378 TGACACAATTGAAAATGTAAAGGCGAAGATCCAGGACAAAGAGGGAATCCCTCCAGACCA 1510437 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 || || | |||||||| || || || | |||||| | || || | |||||||| Sbjct 1510438 GCAACGATTAATCTTTGCAGGGAAGCAGCTCGAAGATGGAAGGACACTGTCAGATTATAA 1510497 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 ||||||||||||||| || || || |||| ||||| | |||||||| || Sbjct 1510498 CATTCAAAAAGAATCCACACTTCATCTGGTTCTAAGACTTCGAGGAGGAAT 1510548 Score = 102 bits (112), Expect = 7e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 ||||||||| ||||| || ||| | || || |||||||| ||| ||| ||| |||| Sbjct 1514524 AATGCAAATCTTTGTCAAGACACTCACAGGGAAAACCATCACCCTGGAAGTCGAAGCTTC 1514583 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 ||| ||| | | || |||| || ||| || ||||| ||| | || ||||| Sbjct 1514584 AGATACGATAGAGAATGTCAAAGCTAAGATCCAAGATAAAGAAGGAATTCCTCCTGATCA 1514643 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 || || | |||||||| || || || |||||||| | || | | |||||||| Sbjct 1514644 GCAACGATTAATCTTTGCTGGAAAGCAGCTGGAAGATGGAAGGACACTTTCAGATTATAA 1514703 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 |||||||||||||| || || ||| | || | ||| | |||||||| || Sbjct 1514704 TATTCAAAAAGAATCAACACTTCACCTTGTGCTGAGACTTCGAGGAGGAAT 1514754 Score = 102 bits (112), Expect = 7e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 ||||||||| || || || || | || || |||||||| ||| ||| ||| |||| Sbjct 1514752 AATGCAAATCTTCGTCAAGACTCTCACAGGAAAAACCATCACCCTGGAAGTCGAAGCTTC 1514811 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | || | ||| || ||| |||||||||||| | || ||| || Sbjct 1514812 TGACACAATTGAAAATGTAAAGGCGAAGATCCAGGACAAAGAGGGAATCCCTCCAGACCA 1514871 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 || || | |||||||| || || || | |||||| | || || | |||||||| Sbjct 1514872 GCAACGATTAATCTTTGCAGGGAAGCAGCTCGAAGATGGAAGGACACTGTCAGATTATAA 1514931 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 ||||||||||||||| || || || |||| ||||| | |||||||| || Sbjct 1514932 CATTCAAAAAGAATCCACACTTCATCTGGTTCTAAGACTTCGAGGAGGAAT 1514982 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 ||||||||| || || || || | || || ||||| || ||| ||| |||| | || Sbjct 1510546 AATGCAAATCTTCGTGAAGACTCTCACAGGGAAAACTATCACCCTAGAAGTGGAAGCCTC 1510605 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 ||| || | | || |||| || ||| |||||||| ||| | || ||| || Sbjct 1510606 AGACACAATAGAGAATGTCAAAGCTAAGATCCAAGACAAAGAAGGAATTCCTCCAGACCA 1510665 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 || || | |||||||| || || || | |||||| | || || | |||||||| Sbjct 1510666 GCAACGATTAATCTTTGCAGGGAAGCAGCTCGAAGATGGAAGGACACTGTCAGATTATAA 1510725 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 ||||||||||||||| || || || |||| ||||| | |||||||| || Sbjct 1510726 CATTCAAAAAGAATCCACACTTCATCTGGTTCTAAGACTTCGAGGAGGAAT 1510776 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 ||||||||| || || || || | || || ||||| || ||| ||| |||| | || Sbjct 1515443 AATGCAAATCTTCGTGAAGACTCTCACAGGGAAAACTATCACCCTAGAAGTGGAAGCCTC 1515502 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 ||| || | | || |||| || ||| |||||||| ||| | || ||| || Sbjct 1515503 AGACACAATAGAGAATGTCAAAGCTAAGATCCAAGACAAAGAAGGAATTCCTCCAGACCA 1515562 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 || || | |||||||| || || || | |||||| | || || | |||||||| Sbjct 1515563 GCAACGATTAATCTTTGCAGGAAAGCAGCTCGAAGATGGGAGGACACTGTCAGATTATAA 1515622 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 ||||||||||||||| || || || |||| ||||| | |||||||| || Sbjct 1515623 CATTCAAAAAGAATCCACCCTTCATCTGGTTCTAAGACTTCGAGGAGGAAT 1515673 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 ||||||||| || || || || | || || |||||||| ||| ||| ||| |||| Sbjct 1515671 AATGCAAATCTTCGTCAAGACTCTCACAGGAAAAACCATCACCCTGGAAGTCGAAGCTTC 1515730 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | || |||| || ||| |||||||||||| | || |||||| Sbjct 1515731 TGACACAATAGAGAATGTCAAAGCTAAGATCCAGGACAAAGAGGGAATACCTCCAGATCA 1515790 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 || || | |||||||| || || || | |||||| | || | | ||||| || Sbjct 1515791 GCAACGATTAATCTTTGCAGGAAAGCAGCTCGAAGATGGGAGGACACTCTCTGATTACAA 1515850 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 ||||||||||||||| || || || |||| | ||| | || ||||| || Sbjct 1515851 CATTCAAAAAGAATCCACACTTCATCTGGTTCTGAGACTTCGGGGAGGAAT 1515901 Score = 82.4 bits (90), Expect = 6e-11 Identities = 163/240 (68%), Gaps = 11/240 (5%) Strand=Plus/Plus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 ||||||||| || || || || | || || |||||||| ||| ||| ||| |||| Sbjct 1514980 AATGCAAATCTTCGTCAAGACTCTCACAGGAAAAACCATCACCCTGGAAGTCGAAGCTTC 1515039 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | || | ||| ||| ||| |||||||||||| | || ||| || Sbjct 1515040 TGACACAATTGAAAATGTAAAGGCAAAGATCCAGGACAAAGAGGGAATCCCTCCAGACCA 1515099 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--------TCT-AAAACTATGGC 28723 || || | |||||||| || || || | |||||| || || ||| | | Sbjct 1515100 GCAACGATTAATCTTTGCAGGGAAGCAGCTCGAAGATGGAAGGACACTCAACACTCT--C 1515157 Query 28724 CGATTATAACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 |||||||| |||||||||||||| || || ||| | || | ||| | |||||||| || Sbjct 1515158 AGATTATAATATTCAAAAAGAATCAACACTTCACCTTGTGCTGAGACTTCGAGGAGGAAT 1515217 >seq467 Length=2555529 Score = 96.9 bits (106), Expect = 3e-15 Identities = 146/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 |||||| || || ||||| ||||| || || || ||||| || |||| |||| | || Sbjct 1366115 AATGCAGATCTTCGTAAAGACATTGACTGGAAAGACCATCACTCTCGAAGTGGAAGCATC 1366056 Query 28613 AGAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATC 28671 ||| || | | || | || || |||| || |||||||| || | || ||||| Sbjct 1366055 AGATACAATTGAAAATGTTAAAGCCAAAATTCAG-GACAAAGAAGGTATTCCTCCAGATC 1365997 Query 28672 AACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATA 28731 |||| ||| | |||||||| || |||||||| |||||| || | ||||||| | Sbjct 1365996 AACAAAGATTGATCTTTGCTGGTAAACAATTAGAAGATGGACGCACGTTATCCGATTACA 1365937 Query 28732 ACATTCAAAAAGAATCTACTCTGCA 28756 | |||||||||||||| || || || Sbjct 1365936 ATATTCAAAAAGAATCAACCCTTCA 1365912 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/208 (71%), Gaps = 6/208 (3%) Strand=Plus/Minus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 |||||| || || ||||| ||||| || || || ||||| || ||| ||| | || Sbjct 1366343 AATGCAGATCTTCGTAAAGACATTGACTGGAAAGACCATCACTCTTGAAGTTGAAGCCTC 1366284 Query 28613 AGAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATC 28671 ||| || | | || | || || |||| || || |||||||| | || ||| | Sbjct 1366283 AGACACTATTGAAAATGTTAAAGCTAAAATTCAG-GATAAAGAGGGTATTCCTCCAGACC 1366225 Query 28672 AACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCTAAAACTATGGCCGATTA 28729 |||| ||||| ||||| || |||||||||||||||||| | | | ||| | || || Sbjct 1366224 AACAAAGACTGATCTTCGCTGGCAAACAATTGGAAGATGGACGCACATTAT--CTGACTA 1366167 Query 28730 TAACATTCAAAAAGAATCTACTCTGCAC 28757 || |||||||| ||||||||||| ||| Sbjct 1366166 CAATATTCAAAAGGAATCTACTCTTCAC 1366139 Score = 82.4 bits (90), Expect = 6e-11 Identities = 143/206 (69%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 ||||||||| ||||| || || | || || |||||||| || ||| || | || Sbjct 1364386 AATGCAAATTTTTGTGAAGACTCTTACTGGAAAAACCATAACTCTGGAAGTTGAGGCGTC 1364327 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | | | ||| |||||| |||||||| || | || |||||| Sbjct 1364326 TGACACTATTGAAAACGTGAAGGCAAAAATTCAAGACAAAGAAGGCATTCCACCAGATCA 1364267 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCTAAAACTATGGCCGATTAT 28730 |||||| | ||||| || || |||||| |||||||| || | ||| | | ||||| Sbjct 1364266 GCAGAGATTAATCTTCGCTGGTAAACAACTGGAAGATGGTCGTACACTTT--CTGATTAC 1364209 Query 28731 AACATTCAAAAAGAATCTACTCTGCA 28756 || ||||| |||||||||||||| || Sbjct 1364208 AATATTCAGAAAGAATCTACTCTCCA 1364183 >seq459 Length=558815 Score = 87.8 bits (96), Expect = 2e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 28668 GATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGAT 28727 || ||||| ||| | || ||||| || || |||||||||||| || |||| || | ||| Sbjct 439489 GACCAACAAAGATTAATTTTTGCTGGAAAGCAATTGGAAGATGGTAGAACTCTGTCAGAT 439430 Query 28728 TATAACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780 ||||| |||||||| |||||||| |||| | || ||| | ||| |||| || Sbjct 439429 TATAATATTCAAAAGGAATCTACATTGCATTTAGTCTTACGTTTAAGAGGTGG 439377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425372313164814