Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19]
6,266 sequences; 272,660,569 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq105 104 1e-17
>seq105
Length=615523
Score = 104 bits (114), Expect = 1e-17
Identities = 114/152 (75%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 25015 AAATTCTCCAGACAAAACTCTTCTTATTGATAAGTTTGAAGTGAATGGTTCAAAACATTC 25074
||||||||| |||||||||| || | | | | ||| |||| | ||||| | | ||||
Sbjct 157423 AAATTCTCCTGACAAAACTCGTCGTGTATAAATGTTACTAGTGTAAGGTTCTATAGATTC 157364
Query 25075 ATTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGCGAATT 25134
||||||||| || ||||| | |||||||||||||||||| ||||| || | |||||
Sbjct 157363 ATTATTTCCCAAAATTTGCGCGGTAGATGCTGTTGGCATTGGAGCTATCAACAAAGAATT 157304
Query 25135 TCTCAAACCATATTTAACAATCTCTTGTTTTA 25166
||| | || | ||| |||| | || |||||
Sbjct 157303 TCTGACTCCGTGTTTTGCAATTTTTTCTTTTA 157272
Score = 82.4 bits (90), Expect = 4e-11
Identities = 83/108 (77%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 25888 ATTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGG 25947
|| |||||| | ||| |||| || |||||| | |||| | |||||| | ||| ||
Sbjct 156338 ATGTGGACACATCAAAGTCCAAACACCATTTTCCAAAACTCGTTTCATAAAAAGATCAGG 156279
Query 25948 AATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCC 25995
|||||||| ||||||||||| ||||| ||||| |||||||||| ||
Sbjct 156278 AATCCACAAAGCATAAAATAATTCTCTTGCTCTATTTTCTTCTTTACC 156231
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253020676125950
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |