Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19] 6,266 sequences; 272,660,569 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq61 82.4 9e-11 >seq61 Length=1771752 Score = 82.4 bits (90), Expect = 9e-11 Identities = 80/103 (78%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 139282 CTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCTGTGCAGATGTTACTGGTTG 139341 ||||||| | | ||||||| ||||| | | ||||||||| ||||| || || || || | Sbjct 1478633 CTGCATACATTGCAGACATGTTTGCCAATAATGCTTGTGCGGTGCAAATATTGCTAGTAG 1478574 Query 139342 CTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCTAA 139384 ||||||||||||| ||||| || || | ||||| || || || Sbjct 1478573 CTTTGTCTCTTCTGATATGTTGTTCGCGTGTTTGGAGAGCCAA 1478531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578953049950320