Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19]
6,266 sequences; 272,660,569 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq35 298 5e-76
seq307 104 2e-17
seq467 82.4 6e-11
>seq35
Length=4111758
Score = 298 bits (330), Expect = 5e-76
Identities = 302/393 (77%), Gaps = 0/393 (0%)
Strand=Plus/Plus
Query 34255 CCGTGATAACCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATG 34314
|| || || ||||| |||||||| ||||| ||||| | ||| || ||| || ||
Sbjct 1055167 CCATGGTAGCCGCAGGCTTTGCATCCCTGCGAGATAGTCCCCTTCTTCGCGCTGACCATC 1055226
Query 34315 AGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCA 34374
||||| || || ||||| || || ||||||| | ||| | || || ||||| |||||
Sbjct 1055227 AGCTCCGTTTCAGGGTTATCGCAGGCCGGACAGAGAACATATTTTCGAATGAATCCATCG 1055286
Query 34375 AGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTG 34434
|| || || || | ||| || |||||| || ||||| |||||||||| ||| ||||||
Sbjct 1055287 AGGAGATCTTGCAGCTTGGTGGCGTCGTGCGAACCGTTCACGATGAATCTTTCATTTTTG 1055346
Query 34435 TAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCC 34494
|||||| ||| ||||| || || |||||||| ||||||||||| ||||||||| ||||
Sbjct 1055347 AAATCGAACTGGGTTTGAGCTCCGAGCTCGCATCCGAAGTACTTGGTCGGGTAAGTGGCA 1055406
Query 34495 GGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTG 34554
|| | ||||| ||||| || | ||| |||||| |||||||| ||||| |||||||||
Sbjct 1055407 GGTCTTCCAATGGCCTTCGCAACGTCGACCATGTTTACGATGACGGTCTTAATGCCGTTG 1055466
Query 34555 CCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCC 34614
||||| || ||||||||||| ||| ||||||||||| ||||| || ||||| ||
Sbjct 1055467 CCCTTGCCCTCGACCTTGGCTTGGATCCGCGGCATTTTATAGCGATAAAACGCATCGCTG 1055526
Query 34615 ACATTGCGGTTAACGTTCACAGTCCCCATCGTG 34647
|| ||||||||||||| || ||||||| |||
Sbjct 1055527 ACGGTGCGGTTAACGTTGACGCTCCCCATGGTG 1055559
>seq307
Length=2169461
Score = 104 bits (114), Expect = 2e-17
Identities = 163/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAA-CGGAGCCTG 110330
||||||||| |||||||| || | || || |||||||| ||| | ||| || ||| |
Sbjct 1514524 AATGCAAATCTTTGTCAAGACACTCACAGGGAAAACCATCACCCTGGAAGTCGAAGCTTC 1514583
Query 110331 ACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATC 110390
| ||||| | | | || ||| ||||| || |||||||| | || ||||
Sbjct 1514584 A-GATACGATAGAGAATGTCAAAGCTAAGATCCAAGATAAAGAAGGAATTCCTCCTGATC 1514642
Query 110391 AACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACA 110450
| ||| || | || | ||| || || |||||||| |||| || ||| | | ||||| |
Sbjct 1514643 AGCAACGATTAATCTTTGCTGGAAAGCAGCTGGAAGATGGAAGGACACTTTCAGATTATA 1514702
Query 110451 ACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501
| |||||||||||||| || | ||| | ||| | ||||| ||||| ||||
Sbjct 1514703 ATATTCAAAAAGAATCAACACTTCACCTTGTGCTGAGACTTCGAGGAGGAA 1514753
Score = 102 bits (112), Expect = 7e-17
Identities = 164/233 (70%), Gaps = 6/233 (3%)
Strand=Plus/Plus
Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAA-CGGAGC--C 110328
||||||||| || ||||| ||| | || || |||||||| ||| | ||| || ||| |
Sbjct 1510090 AATGCAAATCTTCGTCAAGACTCTCACAGGAAAAACCATCACCCTGGAAGTCGAAGCTTC 1510149
Query 110329 TGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGA 110388
|||| || | | | ||||| |||||| |||||||| || | || ||
Sbjct 1510150 TGAC---ACAATTGAAAATGTAAAGGCGAAGATCCAGGACAAAGAGGGAATCCCTCCAGA 1510206
Query 110389 TCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTA 110448
|| ||| || | || | ||| || || ||||| || |||| || ||| || | |||||
Sbjct 1510207 CCAGCAACGATTAATCTTTGCAGGGAAGCAGCTCGAAGATGGAAGGACACTGTCAGATTA 1510266
Query 110449 CAACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501
||||||||||||||||| || | || |||| ||||||| ||||| ||||
Sbjct 1510267 TAACATTCAAAAAGAATCCACACTTCATCTGGTTCTAAGACTTCGAGGAGGAA 1510319
Score = 102 bits (112), Expect = 7e-17
Identities = 164/233 (70%), Gaps = 6/233 (3%)
Strand=Plus/Plus
Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAA-CGGAGC--C 110328
||||||||| || ||||| ||| | || || |||||||| ||| | ||| || ||| |
Sbjct 1510318 AATGCAAATCTTCGTCAAGACTCTCACAGGAAAAACCATCACCCTGGAAGTCGAAGCTTC 1510377
Query 110329 TGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGA 110388
|||| || | | | ||||| |||||| |||||||| || | || ||
Sbjct 1510378 TGAC---ACAATTGAAAATGTAAAGGCGAAGATCCAGGACAAAGAGGGAATCCCTCCAGA 1510434
Query 110389 TCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTA 110448
|| ||| || | || | ||| || || ||||| || |||| || ||| || | |||||
Sbjct 1510435 CCAGCAACGATTAATCTTTGCAGGGAAGCAGCTCGAAGATGGAAGGACACTGTCAGATTA 1510494
Query 110449 CAACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501
||||||||||||||||| || | || |||| ||||||| ||||| ||||
Sbjct 1510495 TAACATTCAAAAAGAATCCACACTTCATCTGGTTCTAAGACTTCGAGGAGGAA 1510547
Score = 102 bits (112), Expect = 7e-17
Identities = 164/233 (70%), Gaps = 6/233 (3%)
Strand=Plus/Plus
Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAA-CGGAGC--C 110328
||||||||| || ||||| ||| | || || |||||||| ||| | ||| || ||| |
Sbjct 1514752 AATGCAAATCTTCGTCAAGACTCTCACAGGAAAAACCATCACCCTGGAAGTCGAAGCTTC 1514811
Query 110329 TGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGA 110388
|||| || | | | ||||| |||||| |||||||| || | || ||
Sbjct 1514812 TGAC---ACAATTGAAAATGTAAAGGCGAAGATCCAGGACAAAGAGGGAATCCCTCCAGA 1514868
Query 110389 TCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTA 110448
|| ||| || | || | ||| || || ||||| || |||| || ||| || | |||||
Sbjct 1514869 CCAGCAACGATTAATCTTTGCAGGGAAGCAGCTCGAAGATGGAAGGACACTGTCAGATTA 1514928
Query 110449 CAACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501
||||||||||||||||| || | || |||| ||||||| ||||| ||||
Sbjct 1514929 TAACATTCAAAAAGAATCCACACTTCATCTGGTTCTAAGACTTCGAGGAGGAA 1514981
Score = 98.7 bits (108), Expect = 8e-16
Identities = 162/231 (70%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGA-GCCTG 110330
||||||||| || || || ||| | || || ||||| || ||| | ||| ||| ||||
Sbjct 1510546 AATGCAAATCTTCGTGAAGACTCTCACAGGGAAAACTATCACCCTAGAAGTGGAAGCCTC 1510605
Query 110331 ACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATC 110390
| || || | | | || ||| ||||| ||||||||||| | || || |
Sbjct 1510606 A-GACACAATAGAGAATGTCAAAGCTAAGATCCAAGACAAAGAAGGAATTCCTCCAGACC 1510664
Query 110391 AACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACA 110450
| ||| || | || | ||| || || ||||| || |||| || ||| || | ||||| |
Sbjct 1510665 AGCAACGATTAATCTTTGCAGGGAAGCAGCTCGAAGATGGAAGGACACTGTCAGATTATA 1510724
Query 110451 ACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501
|||||||||||||||| || | || |||| ||||||| ||||| ||||
Sbjct 1510725 ACATTCAAAAAGAATCCACACTTCATCTGGTTCTAAGACTTCGAGGAGGAA 1510775
Score = 98.7 bits (108), Expect = 8e-16
Identities = 162/231 (70%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGA-GCCTG 110330
||||||||| || || || ||| | || || ||||| || ||| | ||| ||| ||||
Sbjct 1515443 AATGCAAATCTTCGTGAAGACTCTCACAGGGAAAACTATCACCCTAGAAGTGGAAGCCTC 1515502
Query 110331 ACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATC 110390
| || || | | | || ||| ||||| ||||||||||| | || || |
Sbjct 1515503 A-GACACAATAGAGAATGTCAAAGCTAAGATCCAAGACAAAGAAGGAATTCCTCCAGACC 1515561
Query 110391 AACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACA 110450
| ||| || | || | ||| || || ||||| || |||| || ||| || | ||||| |
Sbjct 1515562 AGCAACGATTAATCTTTGCAGGAAAGCAGCTCGAAGATGGGAGGACACTGTCAGATTATA 1515621
Query 110451 ACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501
|||||||||||||||| || | || |||| ||||||| ||||| ||||
Sbjct 1515622 ACATTCAAAAAGAATCCACCCTTCATCTGGTTCTAAGACTTCGAGGAGGAA 1515672
Score = 96.9 bits (106), Expect = 3e-15
Identities = 172/247 (70%), Gaps = 3/247 (1%)
Strand=Plus/Plus
Query 110257 TTATAAGAGATTTAAA-ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCG 110315
|||| ||| || ||| ||||| || |||||||| || | || || || ||||| |||
Sbjct 1509618 TTATTAGATCTTCAAATATGCAGATCTTTGTCAAGACACTTACAGGGAAGACCATCACCC 1509677
Query 110316 TCGAAA-CGGAGCCTGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAA 110374
| ||| || ||| | | ||||| | | | || || |||||| ||||||||
Sbjct 1509678 TGGAAGTCGAAGCTTCA-GATACGATAGAGAATGTCAAGGCGAAGATCCAGGACAAAGAG 1509736
Query 110375 GGCGTGCCCGTGGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGA 110434
|| | || || || ||| || | || | ||| || || ||||| || |||| ||
Sbjct 1509737 GGAATCCCTCCAGACCAGCAACGATTAATCTTTGCAGGGAAGCAGCTCGAAGATGGAAGG 1509796
Query 110435 ACAATGGCGGATTACAACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGA 110494
||| || | ||||| ||||||||||||||||| || | || |||| ||||||| |||
Sbjct 1509797 ACACTGTCAGATTATAACATTCAAAAAGAATCCACACTTCATCTGGTTCTAAGACTTCGA 1509856
Query 110495 GGGGGAA 110501
|| ||||
Sbjct 1509857 GGAGGAA 1509863
Score = 96.9 bits (106), Expect = 3e-15
Identities = 163/233 (70%), Gaps = 6/233 (3%)
Strand=Plus/Plus
Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAA-CGGAGC--C 110328
||||||||| |||||||| || | || || |||||||| || | ||| || ||| |
Sbjct 1515215 AATGCAAATCTTTGTCAAGACACTCACAGGGAAAACCATCACTCTGGAAGTCGAAGCTTC 1515274
Query 110329 TGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGA 110388
|||| || | | | ||||| ||||| |||||||| || | ||| |
Sbjct 1515275 TGAC---ACAATTGAAAATGTAAAGGCAAAGATCCAGGACAAAGAGGGAATTCCCCCTCA 1515331
Query 110389 TCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTA 110448
||| ||| || | || | ||| || ||||| || || |||| || ||| | | |||||
Sbjct 1515332 TCAGCAACGATTAATCTTTGCTGGGAAACAACTTGAAGATGGAAGGACACTCTCTGATTA 1515391
Query 110449 CAACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501
|||||||||||||||||| || | || |||| || ||||| ||||| ||||
Sbjct 1515392 CAACATTCAAAAAGAATCCACACTTCATCTGGTTTTGAGACTTCGAGGAGGAA 1515444
Score = 93.3 bits (102), Expect = 3e-14
Identities = 162/233 (70%), Gaps = 6/233 (3%)
Strand=Plus/Plus
Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAA-CGGAGC--C 110328
||||||||| || ||||| ||| | || || |||||||| ||| | ||| || ||| |
Sbjct 1515671 AATGCAAATCTTCGTCAAGACTCTCACAGGAAAAACCATCACCCTGGAAGTCGAAGCTTC 1515730
Query 110329 TGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGA 110388
|||| || | | | || ||| ||||| |||||||| || | || ||
Sbjct 1515731 TGAC---ACAATAGAGAATGTCAAAGCTAAGATCCAGGACAAAGAGGGAATACCTCCAGA 1515787
Query 110389 TCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTA 110448
||| ||| || | || | ||| || || ||||| || |||| || ||| | | |||||
Sbjct 1515788 TCAGCAACGATTAATCTTTGCAGGAAAGCAGCTCGAAGATGGGAGGACACTCTCTGATTA 1515847
Query 110449 CAACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501
|||||||||||||||||| || | || |||| | ||||| || || ||||
Sbjct 1515848 CAACATTCAAAAAGAATCCACACTTCATCTGGTTCTGAGACTTCGGGGAGGAA 1515900
Score = 87.8 bits (96), Expect = 1e-12
Identities = 161/233 (69%), Gaps = 6/233 (3%)
Strand=Plus/Plus
Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAA-CGGAGC--C 110328
||||||||| || || || || | || || |||||||| || | ||| || ||| |
Sbjct 1509862 AATGCAAATCTTCGTGAAGACACTCACAGGGAAAACCATCACTCTGGAAGTCGAAGCTTC 1509921
Query 110329 TGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGA 110388
|||| || | | | ||||| |||||| |||||||| || | || ||
Sbjct 1509922 TGAC---ACAATTGAAAATGTAAAGGCGAAGATCCAGGACAAAGAGGGAATCCCTCCAGA 1509978
Query 110389 TCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTA 110448
|| ||| || | || | ||| || || ||||| || |||| || ||| || | |||||
Sbjct 1509979 CCAGCAACGATTAATCTTTGCAGGGAAGCAGCTCGAAGATGGAAGGACACTGTCAGATTA 1510038
Query 110449 CAACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501
||||||||||||||||| || | || |||| ||||||| ||||| ||||
Sbjct 1510039 TAACATTCAAAAAGAATCCACACTTCATCTGGTTCTAAGACTTCGAGGAGGAA 1510091
>seq467
Length=2555529
Score = 82.4 bits (90), Expect = 6e-11
Identities = 137/198 (69%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331
||||||||| ||||| || ||| | || || |||||||| || | ||| ||| |
Sbjct 1364386 AATGCAAATTTTTGTGAAGACTCTTACTGGAAAAACCATAACTCTGGAAGTTGAGGCGTC 1364327
Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391
|| ||| | | | || || || ||| |||||||||||| | || |||||
Sbjct 1364326 TGACACTATTGAAAACGTGAAGGCAAAAATTCAAGACAAAGAAGGCATTCCACCAGATCA 1364267
Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451
|| ||| | || | || |||||||| ||||| |||| | ||| | | ||||||||
Sbjct 1364266 GCAGAGATTAATCTTCGCTGGTAAACAACTGGAAGATGGTCGTACACTTTCTGATTACAA 1364207
Query 110452 CATTCAAAAAGAATCTAC 110469
||||| |||||||||||
Sbjct 1364206 TATTCAGAAAGAATCTAC 1364189
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412810072577138
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