Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19] 6,266 sequences; 272,660,569 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq467 113 3e-20 seq307 111 1e-19 >seq467 Length=2555529 Score = 113 bits (124), Expect = 3e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||||| || ||||| ||||| || ||||| |||| |||| |||| Sbjct 1366131 AGCACAAGGTGAAGAGTAGATTCCTTTTGAATATTGTAGTCAGATAATGTGCGTCCATCT 1366190 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| ||| || || ||||||||||||| ||| |||||| | || | ||||| || || Sbjct 1366191 TCCAATTGTTTGCCAGCGAAGATCAGTCTTTGTTGGTCTGGAGGAATACCCTCTTTATCC 1366250 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | ||||| ||| || | | || | || ||| || || |||| || |||||| Sbjct 1366251 TGAATTTTAGCTTTAACATTTTCAATAGTGTCTGAGGCTTCAACTTCAAGAGTGATGGTC 1366310 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || | |||||||| ||||||||||| Sbjct 1366311 TTTCCAGTCAATGTCTTTACGAAGATCTGCAT 1366342 Score = 107 bits (118), Expect = 1e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||| ||||||||||| ||||| ||||| ||||| |||| || | ||||| || ||||| Sbjct 1364422 CTCTTTCTGAATGTTGTAGTCAGATAGTGTGCGCCCATCTTCTAACTGCTTACCAGCGAA 1364481 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||| || |||||||||| | || | || || || || | ||||| || ||| Sbjct 1364482 GATCAATCTTTGCTGGTCTGGGGGGATGCCTTCTTTATCCTGGATTTTAGCCTTAACGTT 1364541 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | || | || ||||| || || | || ||||||||||| || || || || || Sbjct 1364542 CTCAATAGTGTCTGATGCCTCAACTTCCAAAGTAATGGTCTTTCCAGTAAGAGTTTTCAC 1364601 Query 34966 AAAGATCTGCAT 34977 |||||||||||| Sbjct 1364602 AAAGATCTGCAT 1364613 Score = 89.7 bits (98), Expect = 3e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || || |||| ||| || || || || ||||| || || || | || |||| Sbjct 1365675 AGAACGAGATGAAGGGTTGATTCTTTTTGGATATTATAATCAGAAAGTGTACGTCCATCT 1365734 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| |||||| || || ||||| | || ||||||||| | || | || |||||||| Sbjct 1365735 TCCAATTGCTTGCCAGCAAAGATTAATCTCTGCTGGTCTGGAGGGATACCTTCCTTGTCC 1365794 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | ||||| ||| ||| | | || | || ||||| || || | ||||| || Sbjct 1365795 TGGATTTTAGCTTTCACGTTTTCAATGGTATCGGACGCCTCAACTTCCAATGTTATTGTT 1365854 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || || || ||||| ||||||||||| Sbjct 1365855 TTTCCAGTAAGTGTTTTTACGAAGATCTGCAT 1365886 Score = 87.8 bits (96), Expect = 1e-12 Identities = 137/194 (71%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||| ||||||||||||||||| |||| |||| |||| |||| ||| || || || || Sbjct 1365239 CTCTTTCTGAATGTTATAGTCAGATAATGTGCGTCCATCTTCCAATTGTTTGCCAGCAAA 1365298 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 |||| | || |||||| | || | || || ||||| | ||||| || || | Sbjct 1365299 AATCAACCTCTGTTGGTCTGGAGGAATACCTTCTTTGTCCTGAATTTTAGCCTTTAC--A 1365356 Query 34906 TGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963 | || || | ||| ||||| || || | |||||| || ||||| || ||||| || Sbjct 1365357 TTCTCAATGGTGTCAGATGCCTCAACTTCCAAGGTTATAGTTTTTCCAGTAAGGGTTTTC 1365416 Query 34964 ACAAAGATCTGCAT 34977 || || |||||||| Sbjct 1365417 ACGAATATCTGCAT 1365430 >seq307 Length=2169461 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 ||||||| | | || || ||||| |||| ||| || || ||||||||||| || | Sbjct 1509863 TTCCTCCTCGAAGTCTTAGAACCAGATGAAGTGTGGATTCTTTTTGAATGTTATAATCTG 1509804 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | || | | |||| || || ||||| || || ||||| | ||||||||||||| | | Sbjct 1509803 ACAGTGTCCTTCCATCTTCGAGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGAG 1509744 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | | ||||| ||||| | || || ||||| |||||| || || |||| Sbjct 1509743 GGATTCCCTCTTTGTCCTGGATCTTCGCCTTGACATTCTCTATCGTATCTGAAGCTTCGA 1509684 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | ||| |||||||| || || || ||||| |||||||||||||| Sbjct 1509683 CTTCCAGGGTGATGGTCTTCCCTGTAAGTGTCTTGACAAAGATCTGCAT 1509635 Score = 107 bits (118), Expect = 1e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 ||||||| | | || || ||||| |||| |||| || || ||||||||||| || | Sbjct 1515672 TTCCTCCTCGAAGTCTTAGAACCAGATGAAGGGTGGATTCTTTTTGAATGTTATAATCTG 1515613 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | || | | | |||| || || |||||||| || ||||| | ||||||||||||| | | Sbjct 1515612 ACAGTGTCCTCCCATCTTCGAGCTGCTTTCCTGCAAAGATTAATCGTTGCTGGTCTGGAG 1515553 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | | || || ||||| | || || |||||| |||| | || ||| || | Sbjct 1515552 GAATTCCTTCTTTGTCTTGGATCTTAGCTTTGACATTCTCTATTGTGTCTGAGGCTTCCA 1515493 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | ||| || || || || ||||| ||||| || ||||| ||||| Sbjct 1515492 CTTCTAGGGTGATAGTTTTCCCTGTGAGAGTCTTCACGAAGATTTGCAT 1515444 Score = 102 bits (112), Expect = 5e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 ||||||| | | || || ||||| |||| ||| || || ||||||||||| || | Sbjct 1510319 TTCCTCCTCGAAGTCTTAGAACCAGATGAAGTGTGGATTCTTTTTGAATGTTATAATCTG 1510260 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | || | | |||| || || ||||| || || ||||| | ||||||||||||| | | Sbjct 1510259 ACAGTGTCCTTCCATCTTCGAGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGAG 1510200 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | | ||||| ||||| | || || || || | | || | ||| || |||| Sbjct 1510199 GGATTCCCTCTTTGTCCTGGATCTTCGCCTTTACATTTTCAATTGTGTCAGAAGCTTCGA 1510140 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | ||| ||||| ||||| ||||| ||||| || ||||| ||||| Sbjct 1510139 CTTCCAGGGTGATGGTTTTTCCTGTGAGAGTCTTGACGAAGATTTGCAT 1510091 Score = 102 bits (112), Expect = 5e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 ||||||| | | || || ||||| |||| ||| || || ||||||||||| || | Sbjct 1510547 TTCCTCCTCGAAGTCTTAGAACCAGATGAAGTGTGGATTCTTTTTGAATGTTATAATCTG 1510488 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | || | | |||| || || ||||| || || ||||| | ||||||||||||| | | Sbjct 1510487 ACAGTGTCCTTCCATCTTCGAGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGAG 1510428 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | | ||||| ||||| | || || || || | | || | ||| || |||| Sbjct 1510427 GGATTCCCTCTTTGTCCTGGATCTTCGCCTTTACATTTTCAATTGTGTCAGAAGCTTCGA 1510368 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | ||| ||||| ||||| ||||| ||||| || ||||| ||||| Sbjct 1510367 CTTCCAGGGTGATGGTTTTTCCTGTGAGAGTCTTGACGAAGATTTGCAT 1510319 Score = 102 bits (112), Expect = 5e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 ||||||| | | || || ||||| |||| ||| || || ||||||||||| || | Sbjct 1514981 TTCCTCCTCGAAGTCTTAGAACCAGATGAAGTGTGGATTCTTTTTGAATGTTATAATCTG 1514922 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | || | | |||| || || ||||| || || ||||| | ||||||||||||| | | Sbjct 1514921 ACAGTGTCCTTCCATCTTCGAGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGAG 1514862 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | | ||||| ||||| | || || || || | | || | ||| || |||| Sbjct 1514861 GGATTCCCTCTTTGTCCTGGATCTTCGCCTTTACATTTTCAATTGTGTCAGAAGCTTCGA 1514802 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | ||| ||||| ||||| ||||| ||||| || ||||| ||||| Sbjct 1514801 CTTCCAGGGTGATGGTTTTTCCTGTGAGAGTCTTGACGAAGATTTGCAT 1514753 Score = 98.7 bits (108), Expect = 6e-16 Identities = 167/237 (70%), Gaps = 9/237 (4%) Strand=Plus/Minus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAA-TGGTGCTCTCCTTCTGAATGTTATAGTCC 34807 ||||||| | | ||||| || ||||||| || || | || || ||||| ||||| || Sbjct 1515216 TTCCTCCTCGAAGTCTCAGCACAAGGTGAAGTGTTGAT-TCTTTTTGAATATTATAATCT 1515158 Query 34808 GATAG-GCTGCG----CT--CATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTG 34860 || || | || | || |||| || || ||||| || || ||||| | ||||||||| Sbjct 1515157 GAGAGTGTTGAGTGTCCTTCCATCTTCGAGCTGCTTCCCTGCAAAGATTAATCGTTGCTG 1515098 Query 34861 GTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATT 34920 |||| | || | ||||| ||||| | || ||| || || | | || | ||| Sbjct 1515097 GTCTGGAGGGATTCCCTCTTTGTCCTGGATCTTTGCCTTTACATTTTCAATTGTGTCAGA 1515038 Query 34921 GGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || ||||| || | ||| ||||| ||||| ||||| ||||| || ||||| ||||| Sbjct 1515037 AGCTTCGACTTCCAGGGTGATGGTTTTTCCTGTGAGAGTCTTGACGAAGATTTGCAT 1514981 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 ||||||| | | || || ||||| |||| ||| || || ||||||||||| || | Sbjct 1510091 TTCCTCCTCGAAGTCTTAGAACCAGATGAAGTGTGGATTCTTTTTGAATGTTATAATCTG 1510032 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | || | | |||| || || ||||| || || ||||| | ||||||||||||| | | Sbjct 1510031 ACAGTGTCCTTCCATCTTCGAGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGAG 1509972 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | | ||||| ||||| | || || || || | | || | ||| || |||| Sbjct 1509971 GGATTCCCTCTTTGTCCTGGATCTTCGCCTTTACATTTTCAATTGTGTCAGAAGCTTCGA 1509912 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | || ||||| || || ||||| ||||| || ||||| ||||| Sbjct 1509911 CTTCCAGAGTGATGGTTTTCCCTGTGAGTGTCTTCACGAAGATTTGCAT 1509863 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 ||||||| | | || || ||||| |||| ||| || || ||||||||||| || | Sbjct 1510775 TTCCTCCTCGAAGTCTTAGAACCAGATGAAGTGTGGATTCTTTTTGAATGTTATAATCTG 1510716 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | || | | |||| || || ||||| || || ||||| | ||||||||||||| | | Sbjct 1510715 ACAGTGTCCTTCCATCTTCGAGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGAG 1510656 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | | || || ||||| | || || |||||| |||| | || ||| || | Sbjct 1510655 GAATTCCTTCTTTGTCTTGGATCTTAGCTTTGACATTCTCTATTGTGTCTGAGGCTTCCA 1510596 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | ||| || || || || ||||| ||||| || ||||| ||||| Sbjct 1510595 CTTCTAGGGTGATAGTTTTCCCTGTGAGAGTCTTCACGAAGATTTGCAT 1510547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325667927858654