Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19] 6,266 sequences; 272,660,569 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq202 104 3e-17 >seq202 Length=497029 Score = 104 bits (114), Expect = 3e-17 Identities = 153/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 180426 AAGAATTATTATGGATAATGAAAGGTTTAACAAATTCTAATTTGTTAAATGATATTGGTG 180485 ||||||| |||||| | || ||||| | |||||| | || |||| || | || Sbjct 896 AAGAATTGTTATGGTTTATAAAAGGATCCACAAATGCAAAAGAGTTATCAGAGAAGAATG 955 Query 180486 TTAAAGTGTGGAATGATAATGGTTCGCGTAAGTTTTTAGATTCTTGTGGATTTCATTTTC 180545 || | | ||| ||| ||| ||||||||| | ||||||||||||||||| | Sbjct 956 TTCATATTTGGGATGCAAATAGTTCGCGTACATACCTAGATTCTTGTGGATTTACTGACA 1015 Query 180546 GAAAAGAAGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCAGGAGCTCAAT 180605 || ||||||| ||| | ||||| | ||||||||||||||||||||| ||||| | | Sbjct 1016 GAGAAGAAGGAGATCTGGGACCTGTATATGGATTTCAATGGAGACATTATGGAGCAGAGT 1075 Query 180606 ATATTGACTGTGATACCAACTATATCGGGCAAGGTAT 180642 | | || |||| || |||| ||||||||||| Sbjct 1076 ACAAGAACATGCATACTAATTATAAAGGGCAAGGTAT 1112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655228675194000