Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19]
6,266 sequences; 272,660,569 total letters
Query= NC_023615.1
Length=196456
Score E
Sequences producing significant alignments: (Bits) Value
seq202 98.7 1e-15
seq66 89.7 6e-13
>seq202
Length=497029
Score = 98.7 bits (108), Expect = 1e-15
Identities = 122/167 (73%), Gaps = 0/167 (0%)
Strand=Plus/Plus
Query 171611 AAGAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTG 171670
||||| | |||||| |||| ||||| || || || ||||| | ||| || | ||
Sbjct 896 AAGAATTGTTATGGTTTATAAAAGGATCCACAAATGCAAAAGAGTTATCAGAGAAGAATG 955
Query 171671 TTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTGAAA 171730
|| | ||||| ||| ||| |||| ||| || |||||| || || |||||||| |
Sbjct 956 TTCATATTTGGGATGCAAATAGTTCGCGTACATACCTAGATTCTTGTGGATTTACTGACA 1015
Query 171731 GAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACAT 171777
|| ||||||| ||| | || || | |||||||||||||||||||||
Sbjct 1016 GAGAAGAAGGAGATCTGGGACCTGTATATGGATTTCAATGGAGACAT 1062
>seq66
Length=1746113
Score = 89.7 bits (98), Expect = 6e-13
Identities = 133/185 (72%), Gaps = 4/185 (2%)
Strand=Plus/Plus
Query 192502 TAAATTATCCACAAAAACCACTTGTTACCACA-GATAT-TGCAAAATTTAATAAATTAGA 192559
|| ||||||| || ||||| | ||||| ||| ||| | || || || | || |||
Sbjct 430910 TATATTATCCTCATAAACCTTTAGTTACTACAAGATCTATGGAATATCT--TAGATTTCG 430967
Query 192560 CGATTATCCAAATGGTATTAATGCTATTGTTGCTATAGCTTGCTATACTGGCTATAACCA 192619
|| | ||| ||| |||||| ||| ||||||||| || || || || ||||| ||
Sbjct 430968 TGAATTGCCAGCTGGAATTAATAGTATAGTTGCTATATTGTGTTACACGGGTTATAATCA 431027
Query 192620 AGAAGACAGTATTATTTTAAATAAAGCTTCTATTGAAAGAGGATTATTTGGCACTATAAC 192679
|||||||||| ||||||||||| | || ||||||||||||| ||| | || ||
Sbjct 431028 AGAAGACAGTGTTATTTTAAATGCTAGTGCTGTTGAAAGAGGATTCTTTCGATCTGTATT 431087
Query 192680 TTATA 192684
|||||
Sbjct 431088 TTATA 431092
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628481970293760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |