Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19]
6,266 sequences; 272,660,569 total letters
Query= NC_024450.1
Length=204054
Score E
Sequences producing significant alignments: (Bits) Value
seq133 102 1e-16
seq61 102 1e-16
seq519 98.7 1e-15
seq129 98.7 1e-15
seq2434 95.1 2e-14
seq64 95.1 2e-14
seq453 89.7 7e-13
>seq133
Length=1601264
Score = 102 bits (112), Expect = 1e-16
Identities = 67/74 (91%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 8656 ATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 8715
|||||||| |||||||||||||||||| |||| ||||| | |||||||||||||||||||
Sbjct 293202 ATTCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGAT 293261
Query 8716 TCCCCGACGAGGAG 8729
|||||| || ||||
Sbjct 293262 TCCCCGTCGGGGAG 293275
Score = 95.1 bits (104), Expect = 2e-14
Identities = 67/77 (87%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 139352 ACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACT 139411
||||| || |||||| |||||||||||||||||| | |||| |||||||| ||||||||
Sbjct 293276 ACTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACT 293217
Query 139412 ATACTAACGAGGATTTT 139428
|||||| |||||| |||
Sbjct 293216 ATACTATCGAGGAATTT 293200
Score = 91.5 bits (100), Expect = 2e-13
Identities = 64/72 (89%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 293204 TCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 293263
Query 11789 CCCGACGAGGAG 11800
|||| || ||||
Sbjct 293264 CCCGTCGGGGAG 293275
>seq61
Length=1771752
Score = 102 bits (112), Expect = 1e-16
Identities = 67/74 (91%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 8656 ATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 8715
|||||||| |||||||||||||||||| |||| ||||| | |||||||||||||||||||
Sbjct 510083 ATTCCTCGGTAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGAT 510142
Query 8716 TCCCCGACGAGGAG 8729
|||||| || ||||
Sbjct 510143 TCCCCGCCGGGGAG 510156
Score = 98.7 bits (108), Expect = 1e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||||||||| |||| ||||| | |||||||||||||||||||||
Sbjct 510927 TCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 510986
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 510987 CCCGTCGGGGAG 510998
Score = 96.9 bits (106), Expect = 5e-15
Identities = 69/78 (88%), Gaps = 1/78 (1%)
Strand=Plus/Plus
Query 11727 CAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 11785
|| |||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||
Sbjct 510082 CATTCCTCGGTAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 510141
Query 11786 TTCCCCGACGAGGAGGGA 11803
||||||| || |||||||
Sbjct 510142 TTCCCCGCCGGGGAGGGA 510159
Score = 93.3 bits (102), Expect = 6e-14
Identities = 70/81 (86%), Gaps = 1/81 (1%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| |||||||||
Sbjct 510156 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 510097
Query 139413 TACTAACGAGG-ATTTTGGTA 139432
||||| ||||| || ||||||
Sbjct 510096 TACTACCGAGGAATGTTGGTA 510076
Score = 91.5 bits (100), Expect = 2e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 139352 ACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACT 139411
||||| || |||||| |||||||||||||||||| | |||| |||||||| ||||||||
Sbjct 510999 ACTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACT 510940
Query 139412 ATACTAACGAGGA 139424
|||||| ||||||
Sbjct 510939 ATACTATCGAGGA 510927
Score = 91.5 bits (100), Expect = 2e-13
Identities = 64/72 (89%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 510927 TCCTCGATAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 510986
Query 11789 CCCGACGAGGAG 11800
|||| || ||||
Sbjct 510987 CCCGTCGGGGAG 510998
>seq519
Length=14764
Score = 98.7 bits (108), Expect = 1e-15
Identities = 66/74 (89%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 8656 ATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 8715
|||||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||
Sbjct 499 ATTCCTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGAT 558
Query 8716 TCCCCGACGAGGAG 8729
|||||| || ||||
Sbjct 559 TCCCCGCCGGGGAG 572
Score = 93.3 bits (102), Expect = 6e-14
Identities = 65/73 (89%), Gaps = 1/73 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 501 TCCTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 560
Query 11789 CCCGACGAGGAGG 11801
|||| || |||||
Sbjct 561 CCCGCCGGGGAGG 573
Score = 86.0 bits (94), Expect = 8e-12
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 572 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 513
Query 139413 TACTAACGAGGATTT 139427
||||| |||||| ||
Sbjct 512 TACTACCGAGGAATT 498
>seq129
Length=5769472
Score = 98.7 bits (108), Expect = 1e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||||||||| |||| ||||| | |||||||||||||||||||||
Sbjct 2290140 TCCTCGGTAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 2290199
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 2290200 CCCGCCGGGGAG 2290211
Score = 95.1 bits (104), Expect = 2e-14
Identities = 66/75 (88%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| |||||||||
Sbjct 2290211 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 2290152
Query 139413 TACTAACGAGGATTT 139427
||||| |||||||||
Sbjct 2290151 TACTACCGAGGATTT 2290137
Score = 93.3 bits (102), Expect = 6e-14
Identities = 65/73 (89%), Gaps = 1/73 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 2290140 TCCTCGGTAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 2290199
Query 11789 CCCGACGAGGAGG 11801
|||| || |||||
Sbjct 2290200 CCCGCCGGGGAGG 2290212
>seq2434
Length=9448
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 5465 TCCTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 5524
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 5525 CCCGCCGGGGAG 5536
Score = 93.3 bits (102), Expect = 6e-14
Identities = 66/76 (87%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 5536 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 5477
Query 139413 TACTAACGAGGATTTT 139428
||||| ||||||||||
Sbjct 5476 TACTACCGAGGATTTT 5461
Score = 93.3 bits (102), Expect = 6e-14
Identities = 65/73 (89%), Gaps = 1/73 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 5465 TCCTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 5524
Query 11789 CCCGACGAGGAGG 11801
|||| || |||||
Sbjct 5525 CCCGCCGGGGAGG 5537
>seq64
Length=822164
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 387958 TCCTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 388017
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 388018 CCCGCCGGGGAG 388029
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 395267 TCCTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 395326
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 395327 CCCGCCGGGGAG 395338
Score = 93.3 bits (102), Expect = 6e-14
Identities = 66/76 (87%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 388029 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 387970
Query 139413 TACTAACGAGGATTTT 139428
||||| ||||||||||
Sbjct 387969 TACTACCGAGGATTTT 387954
Score = 93.3 bits (102), Expect = 6e-14
Identities = 65/73 (89%), Gaps = 1/73 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 387958 TCCTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 388017
Query 11789 CCCGACGAGGAGG 11801
|||| || |||||
Sbjct 388018 CCCGCCGGGGAGG 388030
Score = 93.3 bits (102), Expect = 6e-14
Identities = 65/73 (89%), Gaps = 1/73 (1%)
Strand=Plus/Plus
Query 11729 GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787
||||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||
Sbjct 395266 GTCCTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 395325
Query 11788 CCCCGACGAGGAG 11800
||||| || ||||
Sbjct 395326 CCCCGCCGGGGAG 395338
Score = 86.0 bits (94), Expect = 8e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 395338 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 395279
Query 139413 TACTAACGAGGA 139424
||||| ||||||
Sbjct 395278 TACTACCGAGGA 395267
>seq453
Length=4956680
Score = 89.7 bits (98), Expect = 7e-13
Identities = 64/74 (86%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 139352 ACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACT 139411
||||| || |||||| |||||||||||||||||| | |||| |||||||| ||||| ||
Sbjct 4254962 ACTCCCCGACGGGGAGTCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCGCT 4254903
Query 139412 ATACTAACGAGGAT 139425
|||||| |||||||
Sbjct 4254902 ATACTATCGAGGAT 4254889
Score = 89.7 bits (98), Expect = 7e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||| ||||||||| |||| ||||| | |||||||||||||||||| ||
Sbjct 4254890 TCCTCGATAGTATAGCGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGACTC 4254949
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 4254950 CCCGTCGGGGAG 4254961
Score = 82.4 bits (90), Expect = 1e-10
Identities = 62/72 (86%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| |||||||| ||| ||||| |||| ||||| | |||||||||||||||||| ||
Sbjct 4254890 TCCTCGATAGTATAGCGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGACTC 4254949
Query 11789 CCCGACGAGGAG 11800
|||| || ||||
Sbjct 4254950 CCCGTCGGGGAG 4254961
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 652793665931040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |