Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19]
6,266 sequences; 272,660,569 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq307 93.3 4e-14
seq467 84.2 2e-11
>seq307
Length=2169461
Score = 93.3 bits (102), Expect = 4e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516
||| | |||||| ||||| || || || ||||| || || | || ||||||||
Sbjct 1515647 ATGAAGGGTGGATTCTTTTTGAATGTTATAATCTGACAGTGTCCTCCCATCTTCGAGCTG 1515588
Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576
||| || || | || | || |||||||| ||||| || ||||| ||||| ||||||
Sbjct 1515587 CTTTCCTGCAAAGATTAATCGTTGCTGGTCTGGAGGAATTCCTTCTTTGTCTTGGATCTT 1515528
Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636
|||| | ||| | ||||| | || ||||| || | ||||| ||||| || ||
Sbjct 1515527 AGCTTTGACATTCTCTATTGTGTCTGAGGCTTCCACTTCTAGGGTGATAGTTTTCCCTGT 1515468
Query 133637 CAGAGTTTTTACGAAAATCTGCAT 133660
||||| || ||||| || |||||
Sbjct 1515467 GAGAGTCTTCACGAAGATTTGCAT 1515444
Score = 86.0 bits (94), Expect = 6e-12
Identities = 112/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565
|| ||||||||||| || || | || | || |||||||| ||||| || ||||| |||
Sbjct 1510701 TCTTCGAGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGAGGAATTCCTTCTTTG 1510642
Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625
|| |||||| |||| | ||| | ||||| | || ||||| || | |||||
Sbjct 1510641 TCTTGGATCTTAGCTTTGACATTCTCTATTGTGTCTGAGGCTTCCACTTCTAGGGTGATA 1510582
Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660
||||| || || ||||| || ||||| || |||||
Sbjct 1510581 GTTTTCCCTGTGAGAGTCTTCACGAAGATTTGCAT 1510547
Score = 86.0 bits (94), Expect = 6e-12
Identities = 112/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565
|| ||||||||||| || || | || | || |||||||| |||||||| || || |||
Sbjct 1515135 TCTTCGAGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGAGGGATTCCCTCTTTG 1515076
Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625
|| ||||||| ||| | | |||| ||||| | | || || || | ||||| |
Sbjct 1515075 TCCTGGATCTTTGCCTTTACATTTTCAATTGTGTCAGAAGCTTCGACTTCCAGGGTGATG 1515016
Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660
||||| || || ||||| || ||||| || |||||
Sbjct 1515015 GTTTTTCCTGTGAGAGTCTTGACGAAGATTTGCAT 1514981
Score = 82.4 bits (90), Expect = 7e-11
Identities = 111/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565
|| ||||||||||| || || | || | || |||||||| |||||||| || || |||
Sbjct 1510245 TCTTCGAGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGAGGGATTCCCTCTTTG 1510186
Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625
|| |||||| ||| | | |||| ||||| | | || || || | ||||| |
Sbjct 1510185 TCCTGGATCTTCGCCTTTACATTTTCAATTGTGTCAGAAGCTTCGACTTCCAGGGTGATG 1510126
Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660
||||| || || ||||| || ||||| || |||||
Sbjct 1510125 GTTTTTCCTGTGAGAGTCTTGACGAAGATTTGCAT 1510091
Score = 82.4 bits (90), Expect = 7e-11
Identities = 111/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565
|| ||||||||||| || || | || | || |||||||| |||||||| || || |||
Sbjct 1510473 TCTTCGAGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGAGGGATTCCCTCTTTG 1510414
Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625
|| |||||| ||| | | |||| ||||| | | || || || | ||||| |
Sbjct 1510413 TCCTGGATCTTCGCCTTTACATTTTCAATTGTGTCAGAAGCTTCGACTTCCAGGGTGATG 1510354
Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660
||||| || || ||||| || ||||| || |||||
Sbjct 1510353 GTTTTTCCTGTGAGAGTCTTGACGAAGATTTGCAT 1510319
Score = 82.4 bits (90), Expect = 7e-11
Identities = 111/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565
|| ||||||||||| || || | || | || |||||||| |||||||| || || |||
Sbjct 1514907 TCTTCGAGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGAGGGATTCCCTCTTTG 1514848
Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625
|| |||||| ||| | | |||| ||||| | | || || || | ||||| |
Sbjct 1514847 TCCTGGATCTTCGCCTTTACATTTTCAATTGTGTCAGAAGCTTCGACTTCCAGGGTGATG 1514788
Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660
||||| || || ||||| || ||||| || |||||
Sbjct 1514787 GTTTTTCCTGTGAGAGTCTTGACGAAGATTTGCAT 1514753
>seq467
Length=2555529
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/209 (71%), Gaps = 5/209 (2%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|| || || || ||||||||||| || | ||| | | | || || | || || ||
Sbjct 1366374 GTAGATTCCTTTTGTATATTGTAGTCAGAAAGTGTGCGTCCA-TCTTCTAATTGTTTACC 1366432
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| | || | | |||||| || || |||||||| || || || ||| ||||||||
Sbjct 1366433 AGCGAAGATCAATCTCTGCTGATCTGGTGGGATGCCCTCTTTATCCTGGAT-TTTTGCTT 1366491
Query 133583 GAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| | | ||| | ||||| | | ||| || |||| ||| | |||||| || |||| |
Sbjct 1366492 TAACATTCTCGATGGTGTCTGATGCCTCAACCTCGAGGGTTATGGTTTTTCCCGTCAATG 1366551
Query 133642 TTTTTACGAAAATCTGCATGGCTTATTTA 133670
| ||||||||||||||||||| |||| ||
Sbjct 1366552 TCTTTACGAAAATCTGCATGG-TTATCTA 1366579
Score = 82.4 bits (90), Expect = 7e-11
Identities = 145/207 (70%), Gaps = 6/207 (3%)
Strand=Plus/Plus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAG--TCCTCGAGC 133514
||| | ||| || ||||| || ||||| ||||| | ||| ||| || || |
Sbjct 1365455 ATGAAGGGTTGATTCTTTTTGGATATTATAATCAGAAA--GTGTACGTCCATCTTCCAAT 1365512
Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574
|||||||| || | || | | ||||||||| |||||||| ||||||||||| |||
Sbjct 1365513 TGCTTGCCAGCAAAGATTAATCTCTGCTGGTCTGGAGGGATACCTTCCTTGTCCTGGAT- 1365571
Query 133575 TTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| || || | | |||| ||||| | | ||| || || | ||| | ||||| ||
Sbjct 1365572 TTTAGCTTTCACATTTTCAATGGTGTCTGACGCCTCAACTTCCAAGGTTATAGTTTTTCC 1365631
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
|| || ||||| ||||| ||||||||
Sbjct 1365632 AGTAAGGGTTTTCACGAATATCTGCAT 1365658
Score = 82.4 bits (90), Expect = 7e-11
Identities = 145/207 (70%), Gaps = 6/207 (3%)
Strand=Plus/Plus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAG--TCCTCGAGC 133514
||| | ||| || ||||| || ||||| ||||| | ||| ||| || || |
Sbjct 1365683 ATGAAGGGTTGATTCTTTTTGGATATTATAATCAGAAA--GTGTACGTCCATCTTCCAAT 1365740
Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574
|||||||| || | || | | ||||||||| |||||||| ||||||||||| |||
Sbjct 1365741 TGCTTGCCAGCAAAGATTAATCTCTGCTGGTCTGGAGGGATACCTTCCTTGTCCTGGAT- 1365799
Query 133575 TTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| || || | | |||| || |||| | ||| || || | || | ||||| ||
Sbjct 1365800 TTTAGCTTTCACGTTTTCAATGGTATCGGACGCCTCAACTTCCAATGTTATTGTTTTTCC 1365859
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
|| || ||||||||||| ||||||||
Sbjct 1365860 AGTAAGTGTTTTTACGAAGATCTGCAT 1365886
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483382936065840
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