Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19]
6,266 sequences; 272,660,569 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq467 118 7e-22
seq321 100 2e-16
seq307 93.3 3e-14
>seq467
Length=2555529
Score = 118 bits (130), Expect = 7e-22
Identities = 143/192 (74%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618
|||||||| || ||||||||||| | |||||| | || || |||||||| || |||||
Sbjct 1365924 TCTTTTTGAATATTGTAATCGGATAACGTGCGTCCATCTTCTAATTGTTTACCAGCAAAG 1365983
Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATA 33678
||||| | || |||||| | || | |||||||||||| |||||| | || |||||
Sbjct 1365984 ATCAATCTTTGTTGATCTGGAGGAATACCTTCTTTGTCCTGAATTTT-GGCTTTAACATT 1366042
Query 33679 GTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTAC 33737
|| | || || || |||||| || | ||||| || || || || || || |||||
Sbjct 1366043 TTCAATTGTATCTGATGCTTCCACTTCGAGAGTGATGGTCTTTCCAGTCAATGTCTTTAC 1366102
Query 33738 AAAGATCTGCAT 33749
|||||||||||
Sbjct 1366103 GAAGATCTGCAT 1366114
Score = 104 bits (114), Expect = 2e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| | | ||| | || | ||| || || |||||| || ||||| || || ||
Sbjct 1365203 ACCACCACGGAGACGAAGTACAAGATGGAGTGTCGACTCTTTCTGAATGTTATAGTCAGA 1365262
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| ||||||| | || ||||||||||| || ||||||||||| | ||| || ||| | ||
Sbjct 1365263 TAATGTGCGTCCATCTTCCAATTGTTTGCCAGCAAAAATCAACCTCTGTTGGTCTGGAGG 1365322
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| |||||||||||| |||||| | | |||| || | |||||| || || |
Sbjct 1365323 AATACCTTCTTTGTCCTGAATTTT-AGCCTTTACATTCTCAATGGTGTCAGATGCCTCAA 1365381
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
| || | || || ||||| || || | ||||| || || ||||||||
Sbjct 1365382 CTTCCAAGGTTATAGTTTTTCCAGTAAGGGTTTTCACGAATATCTGCAT 1365430
Score = 100 bits (110), Expect = 2e-16
Identities = 139/192 (72%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618
|||||||| || ||||||||||| | |||||| | || || |||||||| || |||||
Sbjct 1364651 TCTTTTTGAATATTGTAATCGGATAACGTGCGTCCATCTTCTAATTGTTTACCAGCAAAG 1364710
Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATA 33678
||||| | || |||||| | || | |||||||||||| |||||| | | ||||
Sbjct 1364711 ATCAATCTTTGTTGATCTGGAGGAATACCTTCTTTGTCCTGAATTTT-AGCCTTTACATT 1364769
Query 33679 GTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTAC 33737
|| | |||||| || || || || | || || ||||| || || | ||||| ||
Sbjct 1364770 CTCAATGGTGTCAGATGCCTCAACTTCCAAGGTTATAGTTTTTCCAGTAAGGGTTTTCAC 1364829
Query 33738 AAAGATCTGCAT 33749
|| ||||||||
Sbjct 1364830 GAATATCTGCAT 1364841
Score = 96.9 bits (106), Expect = 2e-15
Identities = 138/192 (72%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618
|||||||| || || ||||| || ||||| ||| | || |||||||| || || |||||
Sbjct 1365696 TCTTTTTGGATATTATAATCAGAAAGTGTACGTCCATCTTCCAATTGCTTGCCAGCAAAG 1365755
Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATA 33678
|| || | |||||| ||| | || | |||||| ||||| ||||| ||||| | |
Sbjct 1365756 ATTAATCTCTGCTGGTCTGGAGGGATACCTTCCTTGTCCTGGATTTTAGCTTTCA-CGTT 1365814
Query 33679 GTCAC-GGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTAC 33737
||| ||| ||| | || || || | || || ||||| || || | ||||||||
Sbjct 1365815 TTCAATGGTATCGGACGCCTCAACTTCCAATGTTATTGTTTTTCCAGTAAGTGTTTTTAC 1365874
Query 33738 AAAGATCTGCAT 33749
|||||||||||
Sbjct 1365875 GAAGATCTGCAT 1365886
Score = 93.3 bits (102), Expect = 3e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||| | | ||| | ||| | || ||||| || ||||| || ||||| || ||
Sbjct 1366116 CCACCACGGAGACGGAGCACAAGGTGAAGAGTAGATTCCTTTTGAATATTGTAGTCAGAT 1366175
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
| ||||||| | || ||||||||||| || || || |||| | || || ||| | ||
Sbjct 1366176 AATGTGCGTCCATCTTCCAATTGTTTGCCAGCGAAGATCAGTCTTTGTTGGTCTGGAGGA 1366235
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| ||| ||||| || |||||| | || ||||| || | ||||| | ||| ||
Sbjct 1366236 ATACCCTCTTTATCCTGAATTTT-AGCTTTAACATTTTCAATAGTGTCTGAGGCTTCAAC 1366294
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|||| ||||| || || || || || || ||||| |||||||||||
Sbjct 1366295 TTCAAGAGTGATGGTCTTTCCAGTCAATGTCTTTACGAAGATCTGCAT 1366342
Score = 86.0 bits (94), Expect = 4e-12
Identities = 77/97 (79%), Gaps = 0/97 (0%)
Strand=Plus/Plus
Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618
|||||||| || ||||||||||| | |||||| | || || |||||||| || |||||
Sbjct 1364998 TCTTTTTGAATATTGTAATCGGATAACGTGCGTCCATCTTCTAATTGTTTACCAGCAAAG 1365057
Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGT 33655
||||| | || |||||| | || | |||||||||||
Sbjct 1365058 ATCAATCTTTGTTGATCTGGAGGAATACCTTCTTTGT 1365094
Score = 82.4 bits (90), Expect = 5e-11
Identities = 93/125 (74%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600
|| ||||| ||||| ||||| || || |||||||| || ||||| || | || |||
Sbjct 1364177 ACTAAATGGAGAGTAGATTCTTTCTGAATATTGTAATCAGAAAGTGTACGACCATCTTCC 1364236
Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660
| |||||| || || || || || | |||||||||| | || | ||||||||||| |
Sbjct 1364237 AGTTGTTTACCAGCGAAGATTAATCTCTGCTGATCTGGTGGAATGCCTTCTTTGTCTTGA 1364296
Query 33661 ATTTT 33665
|||||
Sbjct 1364297 ATTTT 1364301
>seq321
Length=1097274
Score = 100 bits (110), Expect = 2e-16
Identities = 140/194 (72%), Gaps = 2/194 (1%)
Strand=Plus/Plus
Query 33560 CTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAA 33619
|||| || || || ||||| ||||| || ||| | || || ||||||||||| || ||||
Sbjct 785271 CTTTCTGGATATTATAATCAGAGAGGGTACGTCCATCTTCTAATTGTTTTCCAGCGAAAA 785330
Query 33620 TCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAG 33679
| | |||||| ||||| | || | |||||||| || |||||| | || ||||
Sbjct 785331 TTAGACGCTGTTGATCAGGTGGAATTCCTTCTTTATCTTGAATTTT-AGCTTTTACATTT 785389
Query 33680 TC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACA 33738
|| | ||| || | ||| || || | |||||| ||||| || || || ||||| ||
Sbjct 785390 TCGATGGTATCAGACGCTTCTACCTCGAGCGTGATAGTTTTGCCCGTCAAAGTTTTCACG 785449
Query 33739 AAGATCTGCATAGT 33752
|| |||||||| ||
Sbjct 785450 AATATCTGCATCGT 785463
>seq307
Length=2169461
Score = 93.3 bits (102), Expect = 3e-14
Identities = 150/213 (70%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 33538 AACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCG 33597
|| |||| ||| || ||| |||||||| ||||||||||| |||||||| | | | ||
Sbjct 1515427 AAAACCAGATGAAGTGTGGATTCTTTTTGAATGTTGTAATCAGAGAGTGTCCTTCCATCT 1515368
Query 33598 TCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCG 33657
|| | |||||| || ||||| || || || ||||||| | || | || ||||||||
Sbjct 1515367 TCAAGTTGTTTCCCAGCAAAGATTAATCGTTGCTGATGAGGGGGAATTCCCTCTTTGTCC 1515308
Query 33658 GCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGT 33716
|| || || | |||| || | ||||| | ||| || || | ||||| ||
Sbjct 1515307 TGGATCTT-TGCCTTTACATTTTCAATTGTGTCAGAAGCTTCGACTTCCAGAGTGATGGT 1515249
Query 33717 TTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
||| ||||| | || || |||||||| |||||
Sbjct 1515248 TTTCCCTGTGAGTGTCTTGACAAAGATTTGCAT 1515216
Score = 87.8 bits (96), Expect = 1e-12
Identities = 147/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600
|||| ||| || ||| |||||||| ||||||||||| |||||||| | | || ||
Sbjct 1515880 ACCAGATGAAGTGTGGATTCTTTTTGAATGTTGTAATCAGAGAGTGTCCTCCCATCTTCG 1515821
Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660
| || ||||| ||||| || || || ||||||||| | || | || ||||||||
Sbjct 1515820 AGCTGCTTTCCTGCAAAGATTAATCGTTGCTGATCTGGAGGTATTCCCTCTTTGTCCTGG 1515761
Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719
|| || | || |||| || | ||||| | ||| || || | ||||| |||||
Sbjct 1515760 ATCTT-AGCTTTGACATTCTCTATTGTGTCAGAAGCTTCGACTTCCAGGGTGATGGTTTT 1515702
Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
||||| | || || || ||||| |||||
Sbjct 1515701 TCCTGTGAGAGTCTTGACGAAGATTTGCAT 1515672
Score = 84.2 bits (92), Expect = 1e-11
Identities = 146/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600
|||| ||| || ||| |||||||| ||||| ||||| || ||||| | | | || ||
Sbjct 1510755 ACCAGATGAAGTGTGGATTCTTTTTGAATGTTATAATCTGACAGTGTCCTTCCATCTTCG 1510696
Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660
| || || || ||||| || || || ||||| ||| | || | |||||||||||
Sbjct 1510695 AGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGAGGAATTCCTTCTTTGTCTTGG 1510636
Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719
|| || | || |||| || | ||||| | |||||| || | ||||| |||||
Sbjct 1510635 ATCTT-AGCTTTGACATTCTCTATTGTGTCTGAGGCTTCCACTTCTAGGGTGATAGTTTT 1510577
Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
||||| | || || || ||||| |||||
Sbjct 1510576 CCCTGTGAGAGTCTTCACGAAGATTTGCAT 1510547
Score = 84.2 bits (92), Expect = 1e-11
Identities = 146/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600
|||| ||| || ||| |||||||| ||||| ||||| || ||||| | | || ||
Sbjct 1515652 ACCAGATGAAGGGTGGATTCTTTTTGAATGTTATAATCTGACAGTGTCCTCCCATCTTCG 1515593
Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660
| || ||||| ||||| || || || ||||| ||| | || | |||||||||||
Sbjct 1515592 AGCTGCTTTCCTGCAAAGATTAATCGTTGCTGGTCTGGAGGAATTCCTTCTTTGTCTTGG 1515533
Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719
|| || | || |||| || | ||||| | |||||| || | ||||| |||||
Sbjct 1515532 ATCTT-AGCTTTGACATTCTCTATTGTGTCTGAGGCTTCCACTTCTAGGGTGATAGTTTT 1515474
Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
||||| | || || || ||||| |||||
Sbjct 1515473 CCCTGTGAGAGTCTTCACGAAGATTTGCAT 1515444
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328678897902720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |