Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19]
6,266 sequences; 272,660,569 total letters
Query= NC_026141.2
Length=4988
Score E
Sequences producing significant alignments: (Bits) Value
seq42 95.1 4e-16
seq251 89.7 2e-14
>seq42
Length=2424936
Score = 95.1 bits (104), Expect = 4e-16
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||| ||||||||||| | |
Sbjct 304621 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAATGTCCCTGGTTCGATC 304562
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 304561 CCGGGTTTCGGC 304550
Score = 95.1 bits (104), Expect = 4e-16
Identities = 68/77 (88%), Gaps = 1/77 (1%)
Strand=Plus/Minus
Query 2765 TATG-GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTT 2823
|||| || ||| |||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct 544232 TATGTGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAACGGTCCCTGGTT 544173
Query 2824 CAACCCCGGGCTTCAGC 2840
| | |||||| ||| ||
Sbjct 544172 CGATCCCGGGTTTCGGC 544156
Score = 93.3 bits (102), Expect = 1e-15
Identities = 59/64 (92%), Gaps = 0/64 (0%)
Strand=Plus/Minus
Query 2773 AAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832
|| |||||||||||||||||| |||||||||||||||||||||||| ||||||| |||||
Sbjct 305467 AAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAATCCCGG 305408
Query 2833 GCTT 2836
| ||
Sbjct 305407 GTTT 305404
Score = 89.7 bits (98), Expect = 2e-14
Identities = 58/64 (91%), Gaps = 0/64 (0%)
Strand=Plus/Minus
Query 2773 AAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832
|| |||||||||||||||||| |||||||||||||||||| ||||| ||||||| |||||
Sbjct 304768 AAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAATGTCCCCGGTTCAATCCCGG 304709
Query 2833 GCTT 2836
| ||
Sbjct 304708 GTTT 304705
>seq251
Length=712514
Score = 89.7 bits (98), Expect = 2e-14
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||| ||||| ||||| | |
Sbjct 235461 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAATGTCCCCGGTTCGATC 235520
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 235521 CCGGGTTTCGGC 235532
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15848513757570
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |