Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19] 6,266 sequences; 272,660,569 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq467 93.3 3e-14 >seq467 Length=2555529 Score = 93.3 bits (102), Expect = 3e-14 Identities = 147/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 |||||| || || || || ||||||||||| |||||||| || | ||| ||| | Sbjct 1366115 AATGCAGATCTTCGTAAAGACATTGACTGGAAAGACCATCACTCTCGAAGTGGAAGCATC 1366056 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 ||| | ||| | || ||| |||||| ||||||||||| | || ||||| Sbjct 1366055 AGATACAATTGAAAATGTTAAAGCCAAAATTCAGGACAAAGAAGGTATTCCTCCAGATCA 1365996 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438 |||||| | || | ||| || ||||||||||||||| || | ||||||||| Sbjct 1365995 ACAAAGATTGATCTTTGCTGGTAAACAATTAGAAGATGGACGCACGTTATCCGATTACAA 1365936 Query 106439 CATACAAAAAGAATCTACACTACATTTAGTA 106469 || ||||||||||| || || ||| | ||| Sbjct 1365935 TATTCAAAAAGAATCAACCCTTCATCTTGTA 1365905 Score = 86.0 bits (94), Expect = 5e-12 Identities = 148/213 (69%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 ||||||||||||||| || || | ||||| || ||||| || ||||| || | Sbjct 1364386 AATGCAAATTTTTGTGAAGACTCTTACTGGAAAAACCATAACTCTGGAAGTTGAGGCGTC 1364327 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 || || ||| | ||||| ||||||| |||||||||||| | || ||||| Sbjct 1364326 TGACACTATTGAAAACGTGAAGGCAAAAATTCAAGACAAAGAAGGCATTCCACCAGATCA 1364267 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGAT--TCTAAAACTATGGGCGATTAC 106436 || || | || | || || |||||| | |||||| || | ||| | | ||||| Sbjct 1364266 GCAGAGATTAATCTTCGCTGGTAAACAACTGGAAGATGGTCGTACACTTTCTG--ATTAC 1364209 Query 106437 AACATACAAAAAGAATCTACACTACATTTAGTA 106469 || || || ||||||||||| || ||||||||| Sbjct 1364208 AATATTCAGAAAGAATCTACTCTCCATTTAGTA 1364176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402298875345728