Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19]
6,266 sequences; 272,660,569 total letters
Query= NC_026430.1
Length=125767
Score E
Sequences producing significant alignments: (Bits) Value
seq467 93.3 3e-14
>seq467
Length=2555529
Score = 93.3 bits (102), Expect = 3e-14
Identities = 147/211 (70%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318
|||||| || || || || ||||||||||| |||||||| || | ||| ||| |
Sbjct 1366115 AATGCAGATCTTCGTAAAGACATTGACTGGAAAGACCATCACTCTCGAAGTGGAAGCATC 1366056
Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378
||| | ||| | || ||| |||||| ||||||||||| | || |||||
Sbjct 1366055 AGATACAATTGAAAATGTTAAAGCCAAAATTCAGGACAAAGAAGGTATTCCTCCAGATCA 1365996
Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438
|||||| | || | ||| || ||||||||||||||| || | |||||||||
Sbjct 1365995 ACAAAGATTGATCTTTGCTGGTAAACAATTAGAAGATGGACGCACGTTATCCGATTACAA 1365936
Query 106439 CATACAAAAAGAATCTACACTACATTTAGTA 106469
|| ||||||||||| || || ||| | |||
Sbjct 1365935 TATTCAAAAAGAATCAACCCTTCATCTTGTA 1365905
Score = 86.0 bits (94), Expect = 5e-12
Identities = 148/213 (69%), Gaps = 4/213 (2%)
Strand=Plus/Minus
Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318
||||||||||||||| || || | ||||| || ||||| || ||||| || |
Sbjct 1364386 AATGCAAATTTTTGTGAAGACTCTTACTGGAAAAACCATAACTCTGGAAGTTGAGGCGTC 1364327
Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378
|| || ||| | ||||| ||||||| |||||||||||| | || |||||
Sbjct 1364326 TGACACTATTGAAAACGTGAAGGCAAAAATTCAAGACAAAGAAGGCATTCCACCAGATCA 1364267
Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGAT--TCTAAAACTATGGGCGATTAC 106436
|| || | || | || || |||||| | |||||| || | ||| | | |||||
Sbjct 1364266 GCAGAGATTAATCTTCGCTGGTAAACAACTGGAAGATGGTCGTACACTTTCTG--ATTAC 1364209
Query 106437 AACATACAAAAAGAATCTACACTACATTTAGTA 106469
|| || || ||||||||||| || |||||||||
Sbjct 1364208 AATATTCAGAAAGAATCTACTCTCCATTTAGTA 1364176
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 402298875345728
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |