Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19] 6,266 sequences; 272,660,569 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq307 91.5 1e-13 seq467 86.0 6e-12 >seq307 Length=2169461 Score = 91.5 bits (100), Expect = 1e-13 Identities = 136/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || ||||||||||| ||||| | || || | | || || |||||||| || ||||| Sbjct 1510053 TCTTTTTGAATGTTATAATCTGACAGTGTCCTTCCATCTTCGAGCTGCTTCCCTGCAAAG 1509994 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || || || |||||||| | ||| | | ||| |||||| |||||| ||| | | || Sbjct 1509993 ATTAATCGTTGCTGGTCTGGAGGGATTCCCTCTTTGTCCTGGATCTTCGCCTTTACATTT 1509934 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| | ||| || |||| ||||| ||||| || || | || ||||| Sbjct 1509933 TCAATTGTGTCAGAAGCTTCGACTTCCAGAGTGATGGTTTTCCCTGTGAGTGTCTTCACG 1509874 Query 35726 AATATCTGCATTC 35738 || || ||||||| Sbjct 1509873 AAGATTTGCATTC 1509861 Score = 91.5 bits (100), Expect = 1e-13 Identities = 136/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || ||||||||||| ||||| | || || | | || || |||||||| || ||||| Sbjct 1510281 TCTTTTTGAATGTTATAATCTGACAGTGTCCTTCCATCTTCGAGCTGCTTCCCTGCAAAG 1510222 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || || || |||||||| | ||| | | ||| |||||| |||||| ||| | | || Sbjct 1510221 ATTAATCGTTGCTGGTCTGGAGGGATTCCCTCTTTGTCCTGGATCTTCGCCTTTACATTT 1510162 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| | ||| || |||| ||||| ||||| || || | ||| || || Sbjct 1510161 TCAATTGTGTCAGAAGCTTCGACTTCCAGGGTGATGGTTTTTCCTGTGAGAGTCTTGACG 1510102 Query 35726 AATATCTGCATTC 35738 || || ||||||| Sbjct 1510101 AAGATTTGCATTC 1510089 Score = 91.5 bits (100), Expect = 1e-13 Identities = 136/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || ||||||||||| ||||| | || || | | || || |||||||| || ||||| Sbjct 1510509 TCTTTTTGAATGTTATAATCTGACAGTGTCCTTCCATCTTCGAGCTGCTTCCCTGCAAAG 1510450 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || || || |||||||| | ||| | | ||| |||||| |||||| ||| | | || Sbjct 1510449 ATTAATCGTTGCTGGTCTGGAGGGATTCCCTCTTTGTCCTGGATCTTCGCCTTTACATTT 1510390 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| | ||| || |||| ||||| ||||| || || | ||| || || Sbjct 1510389 TCAATTGTGTCAGAAGCTTCGACTTCCAGGGTGATGGTTTTTCCTGTGAGAGTCTTGACG 1510330 Query 35726 AATATCTGCATTC 35738 || || ||||||| Sbjct 1510329 AAGATTTGCATTC 1510317 Score = 91.5 bits (100), Expect = 1e-13 Identities = 136/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || ||||||||||| ||||| | || || | | || || |||||||| || ||||| Sbjct 1514943 TCTTTTTGAATGTTATAATCTGACAGTGTCCTTCCATCTTCGAGCTGCTTCCCTGCAAAG 1514884 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || || || |||||||| | ||| | | ||| |||||| |||||| ||| | | || Sbjct 1514883 ATTAATCGTTGCTGGTCTGGAGGGATTCCCTCTTTGTCCTGGATCTTCGCCTTTACATTT 1514824 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| | ||| || |||| ||||| ||||| || || | ||| || || Sbjct 1514823 TCAATTGTGTCAGAAGCTTCGACTTCCAGGGTGATGGTTTTTCCTGTGAGAGTCTTGACG 1514764 Query 35726 AATATCTGCATTC 35738 || || ||||||| Sbjct 1514763 AAGATTTGCATTC 1514751 Score = 87.8 bits (96), Expect = 2e-12 Identities = 135/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || ||||||||||| ||||| | || || | | | || || |||||||| || ||||| Sbjct 1515634 TCTTTTTGAATGTTATAATCTGACAGTGTCCTCCCATCTTCGAGCTGCTTTCCTGCAAAG 1515575 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || || || |||||||| | ||||| | || ||||| |||||| || | | | Sbjct 1515574 ATTAATCGTTGCTGGTCTGGAGGAATTCCTTCTTTGTCTTGGATCTTAGCTTTGACATTC 1515515 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| | |||||| || | ||||| ||||| || || | ||| ||||| Sbjct 1515514 TCTATTGTGTCTGAGGCTTCCACTTCTAGGGTGATAGTTTTCCCTGTGAGAGTCTTCACG 1515455 Query 35726 AATATCTGCATTC 35738 || || ||||||| Sbjct 1515454 AAGATTTGCATTC 1515442 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || ||||||||||| ||||| | || || | | || || |||||||| || ||||| Sbjct 1509825 TCTTTTTGAATGTTATAATCTGACAGTGTCCTTCCATCTTCGAGCTGCTTCCCTGCAAAG 1509766 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || || || |||||||| | ||| | | ||| |||||| |||||| ||| | | | Sbjct 1509765 ATTAATCGTTGCTGGTCTGGAGGGATTCCCTCTTTGTCCTGGATCTTCGCCTTGACATTC 1509706 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||| || | ||| || |||| ||||| || || || || | || || ||| Sbjct 1509705 TCTATCGTATCTGAAGCTTCGACTTCCAGGGTGATGGTCTTCCCTGTAAGTGTCTTGACA 1509646 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 1509645 AAGATCTGCAT 1509635 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 |||| || || | ||||| |||| ||| | || || ||||||||||||||||| | Sbjct 1515444 TTCCTCCTCGAAGTCTCAAAACCAGATGAAGTGTGGATTCTTTTTGAATGTTGTAATCAG 1515385 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 | || | | || || || || || || ||||| || || || ||||| | | | Sbjct 1515384 AGAGTGTCCTTCCATCTTCAAGTTGTTTCCCAGCAAAGATTAATCGTTGCTGATGAGGGG 1515325 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCA 35687 ||| | ||| |||||| ||||||| ||| | | || | | ||||| | ||| | Sbjct 1515324 GAATTCCCTCTTTGTCCTGGATCTTTGCCTTTACATTTTCAATTGTGTCAGAAGCTTCGA 1515265 Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 | |||| ||||| ||||| || || | || || ||||| || ||||||| Sbjct 1515264 CTTCCAGAGTGATGGTTTTCCCTGTGAGTGTCTTGACAAAGATTTGCATTC 1515214 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 |||| || || | |||| |||| ||| | || || ||||||||||||||||| | Sbjct 1515900 TTCCTCCCCGAAGTCTCAGAACCAGATGAAGTGTGGATTCTTTTTGAATGTTGTAATCAG 1515841 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 | || | | | || || |||||||| || ||||| || || || ||||| || | || Sbjct 1515840 AGAGTGTCCTCCCATCTTCGAGCTGCTTTCCTGCAAAGATTAATCGTTGCTGATCTGGAG 1515781 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCA 35687 | | | ||| |||||| |||||| || | | | | | ||||| | ||| | Sbjct 1515780 GTATTCCCTCTTTGTCCTGGATCTTAGCTTTGACATTCTCTATTGTGTCAGAAGCTTCGA 1515721 Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 | |||| ||||| ||||| || || | ||| || || || || ||||||| Sbjct 1515720 CTTCCAGGGTGATGGTTTTTCCTGTGAGAGTCTTGACGAAGATTTGCATTC 1515670 Score = 82.4 bits (90), Expect = 7e-11 Identities = 134/193 (69%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || ||||||||||| ||||| | || || | | || || |||||||| || ||||| Sbjct 1510737 TCTTTTTGAATGTTATAATCTGACAGTGTCCTTCCATCTTCGAGCTGCTTCCCTGCAAAG 1510678 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || || || |||||||| | ||||| | || ||||| |||||| || | | | Sbjct 1510677 ATTAATCGTTGCTGGTCTGGAGGAATTCCTTCTTTGTCTTGGATCTTAGCTTTGACATTC 1510618 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| | |||||| || | ||||| ||||| || || | ||| ||||| Sbjct 1510617 TCTATTGTGTCTGAGGCTTCCACTTCTAGGGTGATAGTTTTCCCTGTGAGAGTCTTCACG 1510558 Query 35726 AATATCTGCATTC 35738 || || ||||||| Sbjct 1510557 AAGATTTGCATTC 1510545 >seq467 Length=2555529 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/194 (71%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || ||||| || || ||||| | | || || | || |||| ||||| || ||||| Sbjct 1365468 TCTTTTTGGATATTATAATCAGAAAGTGTACGTCCATCTTCCAATTGCTTGCCAGCAAAG 1365527 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTT-CAGAGT 35664 || || | ||||||||| | ||| | | ||||||||| ||| ||| |||| || | | Sbjct 1365528 ATTAATCTCTGCTGGTCTGGAGGGATACCTTCCTTGTCCTGGAT-TTTAGCTTTCACATT 1365586 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | ||||| || || || |||| || || ||||| || || | |||||||| Sbjct 1365587 TTCAATGGTGTCTGACGCCTCAACTTCCAAGGTTATAGTTTTTCCAGTAAGGGTTTTCAC 1365646 Query 35725 AAATATCTGCATTC 35738 ||||||||||||| Sbjct 1365647 GAATATCTGCATTC 1365660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450758291591280