Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19] 6,266 sequences; 272,660,569 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq467 132 5e-26 seq307 127 2e-24 seq321 102 8e-17 >seq467 Length=2555529 Score = 132 bits (146), Expect = 5e-26 Identities = 169/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 134486 TCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCC 134545 |||||| |||||||| | || | || || || ||||| || ||||| ||||| || Sbjct 1364158 TCCTCCCCTGAGTCGAAGTACTAAATGGAGAGTAGATTCTTTCTGAATATTGTAATCAGA 1364217 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || || || || || || ||||| || || || || || | ||||||||| || || Sbjct 1364218 AAGTGTACGACCATCTTCCAGTTGTTTACCAGCGAAGATTAATCTCTGCTGATCTGGTGG 1364277 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAAT-GTGTCGGACGATTCCA 134664 ||||||||||| |||||||||||| || | || | |||| ||||| |||| || | Sbjct 1364278 AATGCCTTCTTTGTCTTGAATTTTTGCCTTCA-CGTTTTCAATAGTGTCAGACGCCTCAA 1364336 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 | || ||||| |||||||| || || | ||| || || |||||||||||| Sbjct 1364337 CTTCCAGAGTTATGGTTTTTCCAGTAAGAGTCTTCACAAAAATTTGCATT 1364386 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 |||| || | ||| || | || ||||| || || ||||||||||| || |||||||| Sbjct 1366342 TTCCACCACGGAGACGGAGTACAAGGTGAAGTGTAGATTCCTTTTGTATATTGTAGTCAG 1366401 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 || ||| | || || | ||||| || || || ||||| | ||||||||| || | Sbjct 1366402 AAAGTGTGCGTCCATCTTCTAATTGTTTACCAGCGAAGATCAATCTCTGCTGATCTGGTG 1366461 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | ||||| ||||| || || |||||| ||| || || | ||||| || | || | Sbjct 1366462 GGATGCCCTCTTTATCCTGGATTTTTGCTTTAACATTCTCGATGGTGTCTGATGCCTCAA 1366521 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | ||||| || |||||||| || || || || || |||||||| ||||| Sbjct 1366522 CCTCGAGGGTTATGGTTTTTCCCGTCAATGTCTTTACGAAAATCTGCAT 1366570 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 |||| || | ||| || | ||| ||||| || || |||||||||||||| |||||||| Sbjct 1366114 TTCCACCACGGAGACGGAGCACAAGGTGAAGAGTAGATTCCTTTTGAATATTGTAGTCAG 1366173 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 | ||| | || || | |||||||| || || |||| | || || || || | Sbjct 1366174 ATAATGTGCGTCCATCTTCCAATTGTTTGCCAGCGAAGATCAGTCTTTGTTGGTCTGGAG 1366233 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | || || ||||| || |||||||| ||| || || | ||||| || | ||| | Sbjct 1366234 GAATACCCTCTTTATCCTGAATTTTAGCTTTAACATTTTCAATAGTGTCTGAGGCTTCAA 1366293 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 | || ||||| ||||| || || || || || || ||||| || |||||| Sbjct 1366294 CTTCAAGAGTGATGGTCTTTCCAGTCAATGTCTTTACGAAGATCTGCATT 1366343 Score = 82.4 bits (90), Expect = 8e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || || || || || || || || |||||||| ||||| Sbjct 1365204 CCACCACGGAGACGAAGTACAAGATGGAGTGTCGACTCTTTCTGAATGTTATAGTCAGAT 1365263 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || || | |||||||| ||||||||||| | ||| || || || || Sbjct 1365264 AATGTGCGTCCATCTTCCAATTGTTTGCCAGCAAAAATCAACCTCTGTTGGTCTGGAGGA 1365323 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || |||||||| || |||||||| || || || | ||||| || | || || Sbjct 1365324 ATACCTTCTTTGTCCTGAATTTTAGCCTTTACATTCTCAATGGTGTCAGATGCCTCAACT 1365383 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || | || || ||||| || || | ||||| ||||| || |||||| Sbjct 1365384 TCCAAGGTTATAGTTTTTCCAGTAAGGGTTTTCACGAATATCTGCATT 1365431 >seq307 Length=2169461 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 ||||||| | |||| || || || || || |||||||| |||||||||||||| || Sbjct 1515900 TTCCTCCCCGAAGTCTCAGAACCAGATGAAGTGTGGATTCTTTTTGAATGTTGTAATCAG 1515841 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 | || || |||||||| || |||||||| || || || |||||||| || | Sbjct 1515840 AGAGTGTCCTCCCATCTTCGAGCTGCTTTCCTGCAAAGATTAATCGTTGCTGATCTGGAG 1515781 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 |||| || ||||| || || || || |||||| || | |||||| || | ||| | Sbjct 1515780 GTATTCCCTCTTTGTCCTGGATCTTAGCTTTGACATTCTCTATTGTGTCAGAAGCTTCGA 1515721 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 | || || || |||||||| || || | ||| || ||||| ||||||||| Sbjct 1515720 CTTCCAGGGTGATGGTTTTTCCTGTGAGAGTCTTGACGAAGATTTGCATT 1515671 Score = 125 bits (138), Expect = 7e-24 Identities = 168/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-G 134543 ||||||||| |||| | || || || || |||||||| ||||||||||| || || | Sbjct 1510775 TTCCTCCTCGAAGTCTTAGAACCAGATGAAGTGTGGATTCTTTTTGAATGTTATAATCTG 1510716 Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 || | | | || |||||||| || |||||||| || || || ||||| || || Sbjct 1510715 ACAGTGTCCTTCCA-TCTTCGAGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGA 1510657 Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663 || || |||||||| ||||| || || |||||| || | |||||| || | |||| Sbjct 1510656 GGAATTCCTTCTTTGTCTTGGATCTTAGCTTTGACATTCTCTATTGTGTCTGAGGCTTCC 1510597 Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || || || || || ||||| || || | ||| || ||||| ||||||||| Sbjct 1510596 ACTTCTAGGGTGATAGTTTTCCCTGTGAGAGTCTTCACGAAGATTTGCATT 1510546 Score = 125 bits (138), Expect = 7e-24 Identities = 168/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-G 134543 ||||||||| |||| | || || || || |||||||| ||||||||||| || || | Sbjct 1515672 TTCCTCCTCGAAGTCTTAGAACCAGATGAAGGGTGGATTCTTTTTGAATGTTATAATCTG 1515613 Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 || | | | || |||||||| || |||||||| || || || ||||| || || Sbjct 1515612 ACAGTGTCCTCCCA-TCTTCGAGCTGCTTTCCTGCAAAGATTAATCGTTGCTGGTCTGGA 1515554 Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663 || || |||||||| ||||| || || |||||| || | |||||| || | |||| Sbjct 1515553 GGAATTCCTTCTTTGTCTTGGATCTTAGCTTTGACATTCTCTATTGTGTCTGAGGCTTCC 1515494 Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || || || || || ||||| || || | ||| || ||||| ||||||||| Sbjct 1515493 ACTTCTAGGGTGATAGTTTTCCCTGTGAGAGTCTTCACGAAGATTTGCATT 1515443 Score = 109 bits (120), Expect = 6e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 ||||||||| |||| ||| || || || || |||||||| |||||||||||||| || Sbjct 1515444 TTCCTCCTCGAAGTCTCAAAACCAGATGAAGTGTGGATTCTTTTTGAATGTTGTAATCAG 1515385 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 | || || || || ||||| || ||||| || || || ||||||| || | Sbjct 1515384 AGAGTGTCCTTCCATCTTCAAGTTGTTTCCCAGCAAAGATTAATCGTTGCTGATGAGGGG 1515325 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | || || ||||| || || || ||| || || || | |||||| || | ||| | Sbjct 1515324 GAATTCCCTCTTTGTCCTGGATCTTTGCCTTTACATTTTCAATTGTGTCAGAAGCTTCGA 1515265 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 | || ||||| |||||||| || || | || || || || ||||||||| Sbjct 1515264 CTTCCAGAGTGATGGTTTTCCCTGTGAGTGTCTTGACAAAGATTTGCATT 1515215 Score = 107 bits (118), Expect = 2e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-G 134543 ||||||||| |||| | || || || || |||||||| ||||||||||| || || | Sbjct 1510091 TTCCTCCTCGAAGTCTTAGAACCAGATGAAGTGTGGATTCTTTTTGAATGTTATAATCTG 1510032 Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 || | | | || |||||||| || |||||||| || || || ||||| || || Sbjct 1510031 ACAGTGTCCTTCCA-TCTTCGAGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGA 1509973 Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663 || || || ||||| || || || || || || || | |||||| || | ||| Sbjct 1509972 GGGATTCCCTCTTTGTCCTGGATCTTCGCCTTTACATTTTCAATTGTGTCAGAAGCTTCG 1509913 Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || || ||||| |||||||| || || | || || ||||| ||||||||| Sbjct 1509912 ACTTCCAGAGTGATGGTTTTCCCTGTGAGTGTCTTCACGAAGATTTGCATT 1509862 Score = 107 bits (118), Expect = 2e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-G 134543 ||||||||| |||| | || || || || |||||||| ||||||||||| || || | Sbjct 1510319 TTCCTCCTCGAAGTCTTAGAACCAGATGAAGTGTGGATTCTTTTTGAATGTTATAATCTG 1510260 Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 || | | | || |||||||| || |||||||| || || || ||||| || || Sbjct 1510259 ACAGTGTCCTTCCA-TCTTCGAGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGA 1510201 Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663 || || || ||||| || || || || || || || | |||||| || | ||| Sbjct 1510200 GGGATTCCCTCTTTGTCCTGGATCTTCGCCTTTACATTTTCAATTGTGTCAGAAGCTTCG 1510141 Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || || || || |||||||| || || | ||| || ||||| ||||||||| Sbjct 1510140 ACTTCCAGGGTGATGGTTTTTCCTGTGAGAGTCTTGACGAAGATTTGCATT 1510090 Score = 107 bits (118), Expect = 2e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-G 134543 ||||||||| |||| | || || || || |||||||| ||||||||||| || || | Sbjct 1510547 TTCCTCCTCGAAGTCTTAGAACCAGATGAAGTGTGGATTCTTTTTGAATGTTATAATCTG 1510488 Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 || | | | || |||||||| || |||||||| || || || ||||| || || Sbjct 1510487 ACAGTGTCCTTCCA-TCTTCGAGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGA 1510429 Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663 || || || ||||| || || || || || || || | |||||| || | ||| Sbjct 1510428 GGGATTCCCTCTTTGTCCTGGATCTTCGCCTTTACATTTTCAATTGTGTCAGAAGCTTCG 1510369 Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || || || || |||||||| || || | ||| || ||||| ||||||||| Sbjct 1510368 ACTTCCAGGGTGATGGTTTTTCCTGTGAGAGTCTTGACGAAGATTTGCATT 1510318 Score = 107 bits (118), Expect = 2e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-G 134543 ||||||||| |||| | || || || || |||||||| ||||||||||| || || | Sbjct 1514981 TTCCTCCTCGAAGTCTTAGAACCAGATGAAGTGTGGATTCTTTTTGAATGTTATAATCTG 1514922 Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 || | | | || |||||||| || |||||||| || || || ||||| || || Sbjct 1514921 ACAGTGTCCTTCCA-TCTTCGAGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGA 1514863 Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663 || || || ||||| || || || || || || || | |||||| || | ||| Sbjct 1514862 GGGATTCCCTCTTTGTCCTGGATCTTCGCCTTTACATTTTCAATTGTGTCAGAAGCTTCG 1514803 Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || || || || |||||||| || || | ||| || ||||| ||||||||| Sbjct 1514802 ACTTCCAGGGTGATGGTTTTTCCTGTGAGAGTCTTGACGAAGATTTGCATT 1514752 Score = 84.2 bits (92), Expect = 2e-11 Identities = 160/233 (69%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-G 134543 ||||||||| |||| | || || || || |||||||| ||||||||||| || || | Sbjct 1509863 TTCCTCCTCGAAGTCTTAGAACCAGATGAAGTGTGGATTCTTTTTGAATGTTATAATCTG 1509804 Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 || | | | || |||||||| || |||||||| || || || ||||| || || Sbjct 1509803 ACAGTGTCCTTCCA-TCTTCGAGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGA 1509745 Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663 || || || ||||| || || || || ||||| || | || || || | ||| Sbjct 1509744 GGGATTCCCTCTTTGTCCTGGATCTTCGCCTTGACATTCTCTATCGTATCTGAAGCTTCG 1509685 Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716 || || || || ||||| || || || | || || || || || ||||| || Sbjct 1509684 ACTTCCAGGGTGATGGTCTTCCCTGTAAGTGTCTTGACAAAGATCTGCATATT 1509632 >seq321 Length=1097274 Score = 102 bits (112), Expect = 8e-17 Identities = 110/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 134568 TGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATT 134627 ||||| || || ||||| | |||||| ||||| || || || |||||||| ||||||||| Sbjct 785315 TGTTTTCCAGCGAAAATTAGACGCTGTTGATCAGGTGGAATTCCTTCTTTATCTTGAATT 785374 Query 134628 TTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCG 134687 || ||| || || | || || |||| ||| || ||||| || || ||||| || Sbjct 785375 TTAGCTTTTACATTTTCGATGGTATCAGACGCTTCTACCTCGAGCGTGATAGTTTTGCCC 785434 Query 134688 GTTAAAGTTTTAACGAAAATTTGCAT 134713 || |||||||| ||||| || ||||| Sbjct 785435 GTCAAAGTTTTCACGAATATCTGCAT 785460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505358814670320