Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19]
6,266 sequences; 272,660,569 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq467 111 1e-19
seq307 102 7e-17
seq321 91.5 1e-13
>seq467
Length=2555529
Score = 111 bits (122), Expect = 1e-19
Identities = 145/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 27051 GTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTCGAGCTGTTTACC 27109
||||| || ||||||||||||||||| | | ||| |||| | ||||| | ||||| ||
Sbjct 1366146 GTAGATTCCTTTTGAATATTGTAGTCAGATAATG-TGCGTCCATCTTCCAATTGTTTGCC 1366204
Query 27110 GGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTT 27169
||| | || || | ||||| || || || | |||||||||||| || || |||
Sbjct 1366205 AGCGAAGATCAGTCTTTGTTGGTCTGGAGGAATACCCTCTTTATCCTGAATTTTAGCTTT 1366264
Query 27170 CAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGT 27229
| |||| | |||||||| |||||||||||| ||||| || | || || |||| ||
Sbjct 1366265 AACATTTTCAATAGTGTCTGAGGCTTCAACTTCAAGAGTGATGGTCTTTCCAGTCAATGT 1366324
Query 27230 TTTCACAAAGATTTGCAT 27247
|| || ||||| |||||
Sbjct 1366325 CTTTACGAAGATCTGCAT 1366342
Score = 109 bits (120), Expect = 5e-19
Identities = 150/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 27038 TACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTC 27097
||| ||||| | ||||| ||||| ||||||||||| || | | || | |||||
Sbjct 1364176 TACTAAATGGAGAGTAGATTCTTTCTGAATATTGTAATCAGAAAGTGTACGACCATCTTC 1364235
Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157
|| |||||||| ||| | || | | ||| ||||| || || | || ||||| ||
Sbjct 1364236 CAGTTGTTTACCAGCGAAGATTAATCTCTGCTGATCTGGTGGAATGCCTTCTTTGTCTTG 1364295
Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217
|| || |||| | |||| | |||||| | || |||||||| |||||||| | |||
Sbjct 1364296 AATTTTTGCCTTCACGTTTTCAATAGTGTCAGACGCCTCAACTTCCAGAGTTATGGTTTT 1364355
Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|| || ||||| |||||||| ||||||||
Sbjct 1364356 TCCAGTAAGAGTCTTCACAAAAATTTGCAT 1364385
Score = 96.9 bits (106), Expect = 3e-15
Identities = 150/212 (71%), Gaps = 2/212 (1%)
Strand=Plus/Plus
Query 27038 TACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTT 27096
||| | ||| | || || ||||| ||||| |||||||| | | ||| |||| | ||||
Sbjct 1364404 TACAAGATGGAGTGTTGACTCTTTCTGAATGTTGTAGTCAGATAGTGT-GCGCCCATCTT 1364462
Query 27097 CGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGG 27156
| | ||| ||||| ||| | || | | || || || || || | || ||||||||
Sbjct 1364463 CTAACTGCTTACCAGCGAAGATCAATCTTTGCTGGTCTGGGGGGATGCCTTCTTTATCCT 1364522
Query 27157 CGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATT 27216
||| || || | | | || | |||||||| || |||||||| | ||| || | |
Sbjct 1364523 GGATTTTAGCCTTAACGTTCTCAATAGTGTCTGATGCCTCAACTTCCAAAGTAATGGTCT 1364582
Query 27217 TGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
| || || ||||||||||||||||| ||||||
Sbjct 1364583 TTCCAGTAAGAGTTTTCACAAAGATCTGCATA 1364614
Score = 86.0 bits (94), Expect = 5e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110
||||| || ||||| ||||||||||| | |||| | ||||| | ||||||||
Sbjct 1366374 GTAGATTCCTTTTGTATATTGTAGTCAGAAAGTGTGCGTCCATCTTCTAATTGTTTACCA 1366433
Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170
||| | || | | ||| ||||| || || | ||||||||||| ||| || |||
Sbjct 1366434 GCGAAGATCAATCTCTGCTGATCTGGTGGGATGCCCTCTTTATCCTGGATTTTTGCTTTA 1366493
Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230
| | || | ||||||| || ||||| || || ||||| | ||| ||||||| ||
Sbjct 1366494 ACATTCTCGATGGTGTCTGATGCCTCAACCTCGAGGGTTATGGTTTTTCCCGTCAATGTC 1366553
Query 27231 TTCACAAAGATTTGCAT 27247
|| || || || |||||
Sbjct 1366554 TTTACGAAAATCTGCAT 1366570
Score = 82.4 bits (90), Expect = 6e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 27038 TACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTC 27097
||| | ||| | || || ||||||||||||||||| ||| | |||| | |||||
Sbjct 1365905 TACAAGATGAAGGGTTGATTCTTTTTGAATATTGTAATCGGATAACGTGCGTCCATCTTC 1365964
Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157
| |||||||| || | || | | |||||||| || || | ||| ||||| ||
Sbjct 1365965 TAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCTGGAGGAATACCTTCTTTGTCCTG 1366024
Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217
|| ||| ||| | |||| | || |||| ||||| ||||| ||||| || | ||
Sbjct 1366025 AATTTTGGCTTTAACATTTTCAATTGTATCTGATGCTTCCACTTCGAGAGTGATGGTCTT 1366084
Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|| |||| || || || ||||| |||||
Sbjct 1366085 TCCAGTCAATGTCTTTACGAAGATCTGCAT 1366114
>seq307
Length=2169461
Score = 102 bits (112), Expect = 7e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098
|||| ||| | || || ||||||||||| || || || || | | | | ||||||
Sbjct 1515652 ACCAGATGAAGGGTGGATTCTTTTTGAATGTTATAATCTGACAGTGTCCTCCCATCTTCG 1515593
Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158
||||| || || || | || | || || || || || || | || ||||| || |
Sbjct 1515592 AGCTGCTTTCCTGCAAAGATTAATCGTTGCTGGTCTGGAGGAATTCCTTCTTTGTCTTGG 1515533
Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218
||||| ||| | | |||| ||||||| |||||| |||||||| || |||| |||
Sbjct 1515532 ATCTTAGCTTTGACATTCTCTATTGTGTCTGAGGCTTCCACTTCTAGGGTGATAGTTTTC 1515473
Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|| || ||||| ||||| |||||||||||
Sbjct 1515472 CCTGTGAGAGTCTTCACGAAGATTTGCAT 1515444
Score = 98.7 bits (108), Expect = 8e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098
|||| ||| | || || ||||||||||| || || || || | | | ||||||
Sbjct 1510755 ACCAGATGAAGTGTGGATTCTTTTTGAATGTTATAATCTGACAGTGTCCTTCCATCTTCG 1510696
Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158
||||| || || || | || | || || || || || || | || ||||| || |
Sbjct 1510695 AGCTGCTTCCCTGCAAAGATTAATCGTTGCTGGTCTGGAGGAATTCCTTCTTTGTCTTGG 1510636
Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218
||||| ||| | | |||| ||||||| |||||| |||||||| || |||| |||
Sbjct 1510635 ATCTTAGCTTTGACATTCTCTATTGTGTCTGAGGCTTCCACTTCTAGGGTGATAGTTTTC 1510576
Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|| || ||||| ||||| |||||||||||
Sbjct 1510575 CCTGTGAGAGTCTTCACGAAGATTTGCAT 1510547
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
||||| || | | || |||| ||| | || || ||||||||||| ||||| ||
Sbjct 1515898 CCTCCCCGAAGTCTCAGAACCAGATGAAGTGTGGATTCTTTTTGAATGTTGTAATCAGAG 1515839
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| | | | | ||||||||||| || || || | || | || || ||||| || ||
Sbjct 1515838 AGTGTCCTCCCATCTTCGAGCTGCTTTCCTGCAAAGATTAATCGTTGCTGATCTGGAGGT 1515779
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200
| |||||||| || |||||| ||| | | |||| ||||| | ||||| |||
Sbjct 1515778 ATTCCCTCTTTGTCCTGGATCTTAGCTTTGACATTCTCTATTGTGTCAGAAGCTTCGACT 1515719
Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|| || || || | ||| || || ||||| || || |||||||||||
Sbjct 1515718 TCCAGGGTGATGGTTTTTCCTGTGAGAGTCTTGACGAAGATTTGCAT 1515672
>seq321
Length=1097274
Score = 91.5 bits (100), Expect = 1e-13
Identities = 113/155 (73%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152
||||| | ||||| || ||| |||| |||||||||||||| || || | || ||||||
Sbjct 785306 TCTTCTAATTGTTTTCCAGCGAAAATTAGACGCTGTTGATCAGGTGGAATTCCTTCTTTA 785365
Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212
|| || || ||| | |||| | || || | ||||| || || || || |||
Sbjct 785366 TCTTGAATTTTAGCTTTTACATTTTCGATGGTATCAGACGCTTCTACCTCGAGCGTGATA 785425
Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
| ||||||||||| ||||||||| || || |||||
Sbjct 785426 GTTTTGCCCGTCAAAGTTTTCACGAATATCTGCAT 785460
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424901949087792
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |