Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19]
6,266 sequences; 272,660,569 total letters
Query= NC_028099.1
Length=122522
Score E
Sequences producing significant alignments: (Bits) Value
seq202 107 2e-18
>seq202
Length=497029
Score = 107 bits (118), Expect = 2e-18
Identities = 159/223 (71%), Gaps = 2/223 (1%)
Strand=Plus/Minus
Query 112068 TGCCCCATAGTGTCTCCATTGGAATCCATAAATAGGCCCCAGATCTCCCGGGGCTGTATC 112127
||| ||||| ||||||||||| |||||||| | ||| ||||||||||| || | ||
Sbjct 1071 TGCTCCATAATGTCTCCATTGAAATCCATATACAGGTCCCAGATCTCCTTCTTCTCTGTC 1012
Query 112128 TGGAAATTGCTCTCTATTCAACAAATCACTTCTAA-TATGAGGATTCCAAATCTTCACTC 112186
| |||| | | | || | || | || ||| | || |||||| | ||
Sbjct 1011 AGTAAATC-CACAAGAATCTAGGTATGTACGCGAACTATTTGCATCCCAAATATGAACAT 953
Query 112187 CTTTAGATGATAACTCTCTTGCATTTGTGGATCCTCTAATAAACCATAGCAATTCTTCCA 112246
|| |||||||||| ||||||||||||||||| | |||||||||| ||||||||| |
Sbjct 952 TCTTCTCTGATAACTCTTTTGCATTTGTGGATCCTTTTATAAACCATAACAATTCTTCTA 893
Query 112247 CAACCCCTTTCCAGTACACTCTTTTAGTAGTTAGCAGTGGAAA 112289
| || || |||| ||||| ||| ||||||| | ||||||
Sbjct 892 CTACTCCCCTCCAAAACACTTGTTTTGTAGTTAATAATGGAAA 850
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 391915668339358
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |