Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19] 6,266 sequences; 272,660,569 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq333 114 2e-20 >seq333 Length=991201 Score = 114 bits (126), Expect = 2e-20 Identities = 147/200 (74%), Gaps = 2/200 (1%) Strand=Plus/Minus Query 89199 GATCCTGTCTTGCATATAGAACTTAGG-AGGTGGGCTGATATATTTATTATCGCGCCACT 89257 |||||||| ||||| ||||| ||||| | |||||||||| | || | ||||| ||| | Sbjct 759967 GATCCTGTATTGCACATAGA-CTTAGTCAAGTGGGCTGATTTGTTCCTAATCGCTCCATT 759909 Query 89258 AACGGCTAATACTCTAGCGAAGATAGCTAATGGTATATGCGACAACTTACTAACTTCTAT 89317 | ||||| || | | |||||||| | |||||||||||| || | | || | | | Sbjct 759908 AGATGCTAACACATTGGGCAAGATAGCAAGTGGTATATGCGATAATATTTTGACCTGTGT 759849 Query 89318 AGTTAGGGCATGGGATATATCAAAGCCCCTTATTTTTTGTCCTGCCATGAATACTCTAAT 89377 | | | || |||||| || ||||| | |||||||| ||||| ||||| || ||| Sbjct 759848 CGCTCGTGCTTGGGATCAGTCGAAGCCTTTGATTTTTTGCCCTGCTATGAACACGAAAAT 759789 Query 89378 GTGGGAACATCCTATTACTG 89397 ||||||||||||| | |||| Sbjct 759788 GTGGGAACATCCTGTCACTG 759769 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603133555863840