Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19]
6,266 sequences; 272,660,569 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq467 145 5e-30
seq307 129 4e-25
seq321 100 2e-16
seq665 91.5 1e-13
>seq467
Length=2555529
Score = 145 bits (160), Expect = 5e-30
Identities = 155/205 (76%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
||||||||| ||||| |||||||| || |||||||| || || | |||||||| | |
Sbjct 1365431 AATGCAGATATTCGTGAAAACCCTTACTGGAAAAACTATAACCTTGGAAGTTGAGGCATC 1365372
Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| | |||| |||||| |||||||||||| | || ||||| ||
Sbjct 1365371 TGACACCATTGAGAATGTAAAGGCTAAAATTCAGGACAAAGAAGGTATTCCTCCAGACCA 1365312
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||| | || || ||||| ||||||||| ||||||| | |||||| ||| || || ||
Sbjct 1365311 ACAGAGGTTGATTTTTGCTGGCAAACAATTGGAAGATGGACGCACATTATCTGACTATAA 1365252
Query 23790 CATACAAAAAGAGTCCACATTACAT 23814
||| || |||||||| ||| | |||
Sbjct 1365251 CATTCAGAAAGAGTCGACACTCCAT 1365227
Score = 141 bits (156), Expect = 6e-29
Identities = 150/198 (76%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
||||||||| ||||| |||||||| || |||||||| || || | |||||||| | |
Sbjct 1364842 AATGCAGATATTCGTGAAAACCCTTACTGGAAAAACTATAACCTTGGAAGTTGAGGCATC 1364783
Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| | |||| |||||| |||||||||||| | || ||||||||
Sbjct 1364782 TGACACCATTGAGAATGTAAAGGCTAAAATTCAGGACAAAGAAGGTATTCCTCCAGATCA 1364723
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | || || ||||| || |||||| | ||||| | |||||| ||| |||||||||
Sbjct 1364722 ACAAAGATTGATCTTTGCTGGTAAACAATTAGAAGATGGACGCACGTTATCCGATTACAA 1364663
Query 23790 CATACAAAAAGAGTCCAC 23807
|| |||||||| || ||
Sbjct 1364662 TATTCAAAAAGAATCAAC 1364645
Score = 140 bits (154), Expect = 2e-28
Identities = 152/199 (76%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
||||||||| ||||| || || | || ||||| || |||||||||||||| || | |
Sbjct 1366115 AATGCAGATCTTCGTAAAGACATTGACTGGAAAGACCATCACTCTCGAAGTGGAAGCATC 1366056
Query 23670 GGACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728
|| || |||||| | ||||| | |||| || |||||||||||| | || |||||||
Sbjct 1366055 AGATACAATTGAAAATGTTAAAGCCAAAA-TTCAGGACAAAGAAGGTATTCCTCCAGATC 1365997
Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788
|||| | || || ||||| || |||||| | ||||| | |||||| ||| ||||||||
Sbjct 1365996 AACAAAGATTGATCTTTGCTGGTAAACAATTAGAAGATGGACGCACGTTATCCGATTACA 1365937
Query 23789 ACATACAAAAAGAGTCCAC 23807
| || |||||||| || ||
Sbjct 1365936 ATATTCAAAAAGAATCAAC 1365918
Score = 134 bits (148), Expect = 9e-27
Identities = 158/212 (75%), Gaps = 4/212 (2%)
Strand=Plus/Minus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
|||||| ||||| || || || || || |||||||| || ||||| |||||||| | |
Sbjct 1364386 AATGCAAATTTTTGTGAAGACTCTTACTGGAAAAACCATAACTCTGGAAGTTGAGGCGTC 1364327
Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|||||| |||||| | || ||||||| ||||||||||| | || ||||||||
Sbjct 1364326 TGACACTATTGAAAACGTGAAGGCAAAAATTCAAGACAAAGAAGGCATTCCACCAGATCA 1364267
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACG--CACTTTAGGCGATTAC 23787
||| | ||||| || || || |||||||||||||| | || |||||| ||||||
Sbjct 1364266 GCAGAGATTAATCTTCGCTGGTAAACAACTGGAAGATGGTCGTACACTTT--CTGATTAC 1364209
Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGT 23819
|| || || ||||| || || | ||||||||
Sbjct 1364208 AATATTCAGAAAGAATCTACTCTCCATTTAGT 1364177
Score = 123 bits (136), Expect = 2e-23
Identities = 154/211 (73%), Gaps = 14/211 (7%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| |||||||| ||||| || || ||||| || || ||| | |||||||| | ||
Sbjct 1365202 ATGCAAATTTTCGTGAAAACTCTTACCGGAAAGACCATTACTTTGGAAGTTGAGGCATCG 1365143
Query 23671 GACACTGTTGA-AATATTAAAACAAAAA------------ATTGC-TGACAAAGAAGGTG 23716
|||||| |||| || ||||| | |||| | || | |||||||||||
Sbjct 1365142 GACACTATTGAGAACGTTAAAGCTAAAATCCAGGATAAGGAAGGCATCACAAAGAAGGTA 1365083
Query 23717 TACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTT 23776
| || ||||||||||| | || || ||||| || |||||| | ||||| | |||||| |
Sbjct 1365082 TTCCTCCAGATCAACAAAGATTGATCTTTGCTGGTAAACAATTAGAAGATGGACGCACGT 1365023
Query 23777 TAGGCGATTACAACATACAAAAAGAGTCCAC 23807
|| ||||||||| || |||||||| || ||
Sbjct 1365022 TATCCGATTACAATATTCAAAAAGAATCAAC 1364992
Score = 109 bits (120), Expect = 4e-19
Identities = 145/199 (73%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| || || | ||||||||||| || || ||||| ||||| | |
Sbjct 1366570 ATGCAGATTTTCGTAAAGACATTGACGGGAAAAACCATAACCCTCGAGGTTGAGGCATCA 1366511
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || ||| ||||| | |||||| || ||||| || | || ||||||||
Sbjct 1366510 GACACCATCGAGAATGTTAAAGC-AAAAATCCAGGATAAAGAGGGCATCCCACCAGATCA 1366452
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | || || || || || |||||| | ||||| | |||||| | || |||||
Sbjct 1366451 GCAGAGATTGATCTTCGCTGGTAAACAATTAGAAGATGGACGCACACTTTCTGACTACAA 1366392
Query 23790 CATACAAAAAGAGTCCACA 23808
|||||||| || || |||
Sbjct 1366391 TATACAAAAGGAATCTACA 1366373
>seq307
Length=2169461
Score = 129 bits (142), Expect = 4e-25
Identities = 166/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
|||||| || || || || || ||||| || ||||| |||||||| ||||| || | |
Sbjct 1515215 AATGCAAATCTTTGTCAAGACACTCACAGGGAAAACCATCACTCTGGAAGTCGAAGCTTC 1515274
Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||||| |||| ||| || |||||||| || | || || ||||
Sbjct 1515275 TGACACAATTGAAAATGTAAAGGCAAAGATCCAGGACAAAGAGGGAATTCCCCCTCATCA 1515334
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|| || ||||| ||||| || |||||||| ||||| | | | || | ||||||||
Sbjct 1515335 GCAACGATTAATCTTTGCTGGGAAACAACTTGAAGATGGAAGGACACTCTCTGATTACAA 1515394
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838
||| |||||||| |||||| | ||| | ||||| || | |||||||||
Sbjct 1515395 CATTCAAAAAGAATCCACACTTCATCTGGTTTTGAGACTTCGAGGAGGA 1515443
Score = 120 bits (132), Expect = 2e-22
Identities = 166/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
|||||| || ||||| || || ||||| || ||||| ||||| || ||||| || || |
Sbjct 1510546 AATGCAAATCTTCGTGAAGACTCTCACAGGGAAAACTATCACCCTAGAAGTGGAAGCCTC 1510605
Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728
||||| | || ||| | ||| | || | | ||||||||||| | || ||||| |
Sbjct 1510606 AGACACAATAGAGAATGTCAAAGCTAAGA-TCCAAGACAAAGAAGGAATTCCTCCAGACC 1510664
Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788
| || || ||||| ||||| || || || || ||||| | | | || | ||||| |
Sbjct 1510665 AGCAACGATTAATCTTTGCAGGGAAGCAGCTCGAAGATGGAAGGACACTGTCAGATTATA 1510724
Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838
|||| |||||||| |||||| | ||| | ||| |||| | |||||||||
Sbjct 1510725 ACATTCAAAAAGAATCCACACTTCATCTGGTTCTAAGACTTCGAGGAGGA 1510774
Score = 114 bits (126), Expect = 9e-21
Identities = 165/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
|||||| || ||||| || || ||||| |||||||| ||||| || ||||| || | |
Sbjct 1515671 AATGCAAATCTTCGTCAAGACTCTCACAGGAAAAACCATCACCCTGGAAGTCGAAGCTTC 1515730
Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728
||||| | || ||| | ||| | || | | |||||||| || |||| |||||||
Sbjct 1515731 TGACACAATAGAGAATGTCAAAGCTAAGA-TCCAGGACAAAGAGGGAATACCTCCAGATC 1515789
Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788
| || || ||||| ||||| || || || || ||||| | | || | |||||||
Sbjct 1515790 AGCAACGATTAATCTTTGCAGGAAAGCAGCTCGAAGATGGGAGGACACTCTCTGATTACA 1515849
Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838
|||| |||||||| |||||| | ||| | ||| | || | || ||||||
Sbjct 1515850 ACATTCAAAAAGAATCCACACTTCATCTGGTTCTGAGACTTCGGGGAGGA 1515899
Score = 111 bits (122), Expect = 1e-19
Identities = 164/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
|||||| || ||||| || || ||||| || ||||| ||||| || ||||| || || |
Sbjct 1515443 AATGCAAATCTTCGTGAAGACTCTCACAGGGAAAACTATCACCCTAGAAGTGGAAGCCTC 1515502
Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728
||||| | || ||| | ||| | || | | ||||||||||| | || ||||| |
Sbjct 1515503 AGACACAATAGAGAATGTCAAAGCTAAGA-TCCAAGACAAAGAAGGAATTCCTCCAGACC 1515561
Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788
| || || ||||| ||||| || || || || ||||| | | || | ||||| |
Sbjct 1515562 AGCAACGATTAATCTTTGCAGGAAAGCAGCTCGAAGATGGGAGGACACTGTCAGATTATA 1515621
Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838
|||| |||||||| ||||| | ||| | ||| |||| | |||||||||
Sbjct 1515622 ACATTCAAAAAGAATCCACCCTTCATCTGGTTCTAAGACTTCGAGGAGGA 1515671
>seq321
Length=1097274
Score = 100 bits (110), Expect = 2e-16
Identities = 136/190 (72%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| ||||| | ||||| ||||| ||||| ||||| || || | |
Sbjct 785460 ATGCAGATATTCGTGAAAACTTTGACGGGCAAAACTATCACGCTCGAGGTAGAAGCGTCT 785401
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
|| || | |||| ||||| |||||| || |||||||| | || || ||||||
Sbjct 785400 GATACCATCGAAAATGTAAAAGCTAAAATTCAAGATAAAGAAGGAATTCCACCTGATCAA 785341
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|||||| |||| || || || |||||| | ||||| | ||| || | ||||| ||
Sbjct 785340 CAGCGTCTAATTTTCGCTGGAAAACAATTAGAAGATGGACGTACCCTCTCTGATTATAAT 785281
Query 23791 ATACAAAAAG 23800
|| || ||||
Sbjct 785280 ATCCAGAAAG 785271
>seq665
Length=2298905
Score = 91.5 bits (100), Expect = 1e-13
Identities = 140/200 (70%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 32826 ACATAATCTTTTCCTTTAATCAATTTTACGTATTGACAATTGGGAAACCAACGAGCGTGC 32885
|||||||||| ||||| || || | || || | ||| || | |||||| || ||
Sbjct 182827 ACATAATCTTGTCCTTGAACCATTAATAAATAATAACACTTAGAAAACCATTTTGCATGT 182886
Query 32886 ATATGCCAAGGGTCGTCATCAGTTTCCCAATCTTTCAAACCGCCGTCGCAGTAAAAACAC 32945
| ||| || || || || | ||||||||| || || || || | |||| | ||||
Sbjct 182887 TGTTCCCATGGATCATCTTCTGGTTCCCAATCCTTTAAGCCACCTCCACAGTGATAACAT 182946
Query 32946 ACAACTTTGTCGCCTCTTCCGCTATaaaaaaaaCCCGCTTCTGCTAATTGTGTGGGTTTC 33005
| || ||| ||| | || ||||| ||||||| || |||||||||||| | ||
Sbjct 182947 AAGGTTTGGTCACCTTTACCAATATAATAAAAACCAGCATCTGCTAATTGTTCTTTTGTC 183006
Query 33006 TGTTGCAAAGATTTTGGCCA 33025
||| ||| ||||||||||||
Sbjct 183007 TGTGGCATAGATTTTGGCCA 183026
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 337983787263128
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