Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19] 6,266 sequences; 272,660,569 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq467 82.4 6e-11 >seq467 Length=2555529 Score = 82.4 bits (90), Expect = 6e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 101042 GTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTCCAATTGTTTGCCC 101101 |||||||||||||||||||||||||||| | || |||||| |||||||| || Sbjct 1365918 GTTGATTCTTTTTGAATATTGTAATCGGATAACGTGCGTCCATCTTCTAATTGTTTACCA 1365977 Query 101102 GCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCAATTTTTTGTTTC 101161 ||| | || | |||||||| ||| || | ||||||||||| |||||| ||| Sbjct 1365978 GCAAAGATCAATCTTTGTTGATCTGGAGGAATACCTTCTTTGTCCTGAATTTTGGCTTTA 1366037 Query 101162 ACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTTTTGCCCGTCAATGTT 101221 |||| | | || |||| | ||||| || || || || || |||||||| Sbjct 1366038 ACATTTTCAATTGTATCTGATGCTTCCACTTCGAGAGTGATGGTCTTTCCAGTCAATGTC 1366097 Query 101222 TTAATAAAAATTTGCATT 101239 || | || || |||||| Sbjct 1366098 TTTACGAAGATCTGCATT 1366115 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409629515484894