Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19] 6,266 sequences; 272,660,569 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq305 104 2e-17 >seq305 Length=1407860 Score = 104 bits (114), Expect = 2e-17 Identities = 114/152 (75%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 4842 TACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCT 4901 |||||||| ||||| | |||||| ||||| | || || || || || || | || ||| Sbjct 686682 TACATTTCTGAATGCACATTTTCCATAGCTACTTGGAAGCCATAGAAACAACGTGCCTCT 686741 Query 4902 GTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTG 4961 |||| || ||||| | || ||||| ||| || | ||||| || || || || ||| | Sbjct 686742 GTTATCTGTACTTCCTGACTAAATCGTTCAACAAGATTTTCATTGACAATTCCATCAGAG 686801 Query 4962 GCTGCAAAAAACGCCAAAACATGAGATATAAA 4993 ||||||||||| || || ||||||||||| || Sbjct 686802 GCTGCAAAAAATGCTAATACATGAGATATGAA 686833 Score = 87.8 bits (96), Expect = 2e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 5037 TTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAGAC 5096 |||| | ||||||||| || |||||||| || || |||||||||||||| ||||| | Sbjct 686956 TTAGAAAGATCAACTTCCTCCACAGTCCAGAAGGAAGCTTCCGCTTTTTTATACATTTGC 687015 Query 5097 CAAATATCAGGATACTGAATCGGAAGTATGACAAATCT 5134 ||||||||||| | ||||| |||| | |||||||| Sbjct 687016 CAAATATCAGGCCATTGAATAGGAAAGACAACAAATCT 687053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427016987556578