Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19]
6,266 sequences; 272,660,569 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq105 183 4e-41
seq305 114 2e-20
>seq105
Length=615523
Score = 183 bits (202), Expect = 4e-41
Identities = 226/309 (73%), Gaps = 0/309 (0%)
Strand=Plus/Minus
Query 75625 TTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCATCATTCCACAATTTTCT 75684
||||||||| || | | ||||||| ||| || || | || | ||| | | |||
Sbjct 157522 TTGAATGGAACCATTGTTTGCTATAATTTCATTTTTCATATTTTCGTCCCAAAGATCTCT 157463
Query 75685 CTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCCAGACAATACTCT 75744
|| |||||| ||| | | ||||||||| || || ||||||||||| ||||| ||||
Sbjct 157462 TTCAGTTAAATCTCGTAATAAATGAGGATTCACTATCTGAAATTCTCCTGACAAAACTCG 157403
Query 75745 TCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGC 75804
||| || ||||| ||||| || || ||||| | ||||||||| |||||||||||||| ||
Sbjct 157402 TCGTGTATAAATGTTACTAGTGTAAGGTTCTATAGATTCATTATTTCCCAAAATTTGCGC 157343
Query 75805 AGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGAT 75864
|| || || || ||||| || || | ||| ||| |||||||| || ||| || ||
Sbjct 157342 GGTAGATGCTGTTGGCATTGGAGCTATCAACAAAGAATTTCTGACTCCGTGTTTTGCAAT 157283
Query 75865 TTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTACAACATCCCAGAGATCGTA 75924
||| |||||||| | ||| ||||| | ||| | |||| ||| | ||| | ||| ||
Sbjct 157282 TTTTTCTTTTAGCGCTGCCCAGTCCCATAAATCAGTTGGTGTAACGTTCCACATATCATA 157223
Query 75925 TTGTAGAAT 75933
||||| |||
Sbjct 157222 TTGTAAAAT 157214
Score = 140 bits (154), Expect = 5e-28
Identities = 128/162 (79%), Gaps = 0/162 (0%)
Strand=Plus/Minus
Query 76508 GTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGA 76567
|||||||| ||| |||||||| |||||||||||| | || |||||| |||||| |||
Sbjct 156391 GTATATAAAGTTTCGAATTCATCACCCCAAACATCAGCTAATCCAGGAGATTCATGTGGA 156332
Query 76568 CACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCAT 76627
|||||||| | ||| |||||| |||| ||| ||||||||||| |||||||| |||||
Sbjct 156331 CACATCAAAGTCCAAACACCATTTTCCAAAACTCGTTTCATAAAAAGATCAGGAATCCAC 156272
Query 76628 AGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCT 76669
| |||| ||||| |||| | |||| |||||| || |||
Sbjct 156271 AAAGCATAAAATAATTCTCTTGCTCTATTTTCTTCTTTACCT 156230
Score = 136 bits (150), Expect = 6e-27
Identities = 188/263 (71%), Gaps = 0/263 (0%)
Strand=Plus/Minus
Query 76973 CTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAAC 77032
|| |||||||| ||| ||||| | |||| ||||||||||||||||||||| || ||
Sbjct 155795 CTGGACATTTGCTGAGTCACAGTACATGCAGAAAACAATGTAGGAGATGCATGTGTAAAA 155736
Query 77033 CATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATT 77092
|| ||| || | | |||||| ||||| || || ||| ||||| ||||||
Sbjct 155735 TATCGTTCTGACAAAAAATTGTAAGTTTCTATGGCTTTTTCAATATCTTCACCATGAATA 155676
Query 77093 CCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTC 77152
| || ||||| | |||||||||||| || || | ||| ||| || || ||||||
Sbjct 155675 GCAACTGCGACTCTCATCAACATATGTTGTGGCCTTTCAACAACTTTTCCATGTATTTTT 155616
Query 77153 AACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCG 77212
| || || | |||| | |||||||| |||||||| ||||| ||| ||||| ||
Sbjct 155615 AGCAGATAGCTTCTTTCAAGCGTTTTAAAGCCAAAATAATTGTAACTAAAATCTCTATCA 155556
Query 77213 TAAATAATAACCGAATTTAGTTT 77235
||||| || | ||||||| |||
Sbjct 155555 TAAATTATTGCTGAATTTAATTT 155533
Score = 127 bits (140), Expect = 3e-24
Identities = 213/308 (69%), Gaps = 0/308 (0%)
Strand=Plus/Minus
Query 76667 CCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATAT 76726
|| ||||| ||||| ||||| | || || | |||||| | |||||||||||||||||||
Sbjct 156169 CCAGTATTTTTTTTGAGATCCAAAAATTCAAAAATATCTGCATGCCATGGTTCTAGATAT 156110
Query 76727 ATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTA 76786
| || | | || || |||||||| ||||||||||| | |||||| || ||||||||
Sbjct 156109 ACAGCAAATGCTCCAGGCCGTTTATTTCCTCCCTGATCAACATATCTAGCTGTGTTATTG 156050
Query 76787 TAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTT 76846
|| || || | ||| || | | ||| |||||| |||| ||| |||| || |
Sbjct 156049 TACACCCTAAGCATCGGTACTAAGCCATTAGATACACCAAGTGTACCAGCTATTGGTGTA 155990
Query 76847 CCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGA 76906
|| | || || || | | | ||| || || || || || ||| || |
Sbjct 155989 CCTCTAGCTCGTATGCAATGTACATTTAGTCCAATACCACCAGCTGATTTGCTAATCAAT 155930
Query 76907 GCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGA 76966
||||| | |||||||| ||||| || || || || ||||| || |||| ||||||
Sbjct 155929 GCACACCTCTTCAATGTATCATAAATTCCTTCAATGCTATCTTCAGTCATTGAAAGAAGG 155870
Query 76967 AAACAGCT 76974
||||| ||
Sbjct 155869 AAACAACT 155862
Score = 116 bits (128), Expect = 5e-21
Identities = 243/358 (68%), Gaps = 8/358 (2%)
Strand=Plus/Minus
Query 76119 TACCAATAGGTCTATGTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAA 76178
|||| |||||||||||||| ||| || ||| ||||||||||| || || ||||| |
Sbjct 156864 TACCTATAGGTCTATGTCTGAAATTTGACTTTTTGGCTTCTGGAATCGGATAGTAATTGA 156805
Query 76179 TATCTATAATTTTATTGAGATTTCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAA 76238
||| |||| ||||| | ||| | ||| | ||| ||| | || ||||| |||
Sbjct 156804 CATCAATAACTTTATCCAAATTACAAGTAACGATTTTTGTCACCTTTTTAAGTTTTTGAA 156745
Query 76239 AATCAAAT-TTTCCATCTA-----TCACAAACATATTAAGAGCTATAGATGCTAGATTAC 76292
|||| || ||| | | ||||||||||||||| || || || || | ||| |
Sbjct 156744 AATCGAACGTTTTGTTAGAGGAATTCACAAACATATTAACGGCAATTGAAGCCAAATTGC 156685
Query 76293 AAACGGCTACCTCATTAGCATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACT 76352
| || || || |||| || ||| ||| || | | || || |||| |||||||| ||
Sbjct 156684 ATACAGCAACTTCATCCGCGCTGGAATACTGAACAACTTCTGTACATAAATTACTACTCT 156625
Query 76353 TGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACA-TGAGTCCTTATAAAGAACA 76411
| || ||||| | ||||| || || |||| || || ||| || || ||||| | |
Sbjct 156624 TAATTGTTCCTATGTTTTGCTGATTTGACTTTCGATTGCAGTGA-TCTTTGTAAAGCATA 156566
Query 76412 AACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTT 76469
|||| ||||| || || | || | | | |||| | |||| | |||||||||
Sbjct 156565 TACGGGGTTCCTGTCTCTACTTGAGCTATAAGGATAGCTGTCCATAAATCTCTAGCTT 156508
Score = 89.7 bits (98), Expect = 7e-13
Identities = 118/164 (72%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 75959 TATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAA 76018
|| ||||| || || || | | ||| || || ||||| || || ||||| ||||| |||
Sbjct 157106 TAGGTTTCATATGTTCCCTTTTCTTCGGCAAGCTCGCAGCTAGCTTCTAAGGCACCATAA 157047
Query 76019 TAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAA 76078
|| | |||||| || || | |||| || | ||||||||| || ||||| || ||
Sbjct 157046 TACAATGTTTCAAATATTTGGATATTTAGCTTTTGCGCTTCTTCGCTTTCAAATGGGTAT 156987
Query 76079 TGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACC 76122
| | | || ||||||||||| ||||| || | |||||||||
Sbjct 156986 CGCATTAAAAGGAATGCATCTGCAAGTCCTTGTATTCCAATACC 156943
>seq305
Length=1407860
Score = 114 bits (126), Expect = 2e-20
Identities = 126/165 (76%), Gaps = 2/165 (1%)
Strand=Plus/Plus
Query 46900 TATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAAT 46959
|| ||||| ||||| | |||||||||||||| | ||||| ||||| | || ||
Sbjct 686661 TACGTATCAATTAATAATGAGTACATTTCTGAATGCACATTTTCCATAGCTACTTGGAAG 686720
Query 46960 CCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCAGACAA-ATT 47018
|| || ||||| | ||| || || |||||||| || || |||||||||| |||| |||
Sbjct 686721 CCATAGAAACAACGTGCCTCTGTTATCTGTACTTCCTGACTAAATCGTTCA-ACAAGATT 686779
Query 47019 CTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATG 47063
||||| || ||||||||| || ||||||||||| ||||||||
Sbjct 686780 TTCATTGACAATTCCATCAGAGGCTGCAAAAAATGCTAATACATG 686824
Score = 98.7 bits (108), Expect = 1e-15
Identities = 135/189 (71%), Gaps = 0/189 (0%)
Strand=Plus/Plus
Query 46458 CAGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAG 46517
|||||| ||||| || ||||| ||||| ||| | || ||||||||| ||||| |
Sbjct 686051 CAGTCTGTCTGCGACAAATTCGATATATTGACACATAAGTTTACAATTCATGCCTATCAT 686110
Query 46518 TTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTAT 46577
|| || |||| || || || | ||| ||||||||||| |||||||| || ||
Sbjct 686111 TTCAACAGGTAATGCATCTGTTAAAAATTCTTGTTCAATTTCCACAGCATCTTTAATAAT 686170
Query 46578 CGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAA 46637
|| || ||| || | || || || | ||||||||||||||||||||||||
Sbjct 686171 TGACGTAACTCGCTCAGAAGACGGCTTTTGTATAATATGTTTAAACATTAAACATGCAAA 686230
Query 46638 ATCACAATG 46646
|||||||||
Sbjct 686231 ATCACAATG 686239
Score = 95.1 bits (104), Expect = 2e-14
Identities = 105/138 (76%), Gaps = 3/138 (2%)
Strand=Plus/Plus
Query 46284 TTAAAAGTCGACATCTAAAGAAAAATGATTATC--TTCT-TGTGACATAACTCCCATTTT 46340
|||||||||| ||| | | ||||| | | || |||| | | ||| |||||| ||
Sbjct 685803 TTAAAAGTCGGCATTAACTGTAAAATTACTTTCAATTCTATCTTGCATGACTCCCCACTT 685862
Query 46341 TTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTC 46400
||||||||| || || |||||| ||||| || ||||| |||||||| || |||| ||
Sbjct 685863 TTGGTATTCTCCAACTTTTTTCTCAAAAAAGTTTGTTTTACCTTCCAAAGAAATATGCTC 685922
Query 46401 CATAAAATCAAACGGATT 46418
|||||||||||| |||||
Sbjct 685923 CATAAAATCAAATGGATT 685940
Score = 89.7 bits (98), Expect = 7e-13
Identities = 92/119 (77%), Gaps = 1/119 (1%)
Strand=Plus/Plus
Query 47106 ATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTT 47165
||| ||| ||| || | ||| ||||| || | |||||||| || || || ||||||||
Sbjct 686947 ATTTATACCTTA-GAAAGATCAACTTCCTCCACAGTCCAGAAGGAAGCTTCCGCTTTTTT 687005
Query 47166 ATACATATTCCATATATCACGATATTGGATCGGAAAAATAACAAATCTATTTGGATTTT 47224
|||||| | ||| |||||| | |||| || ||||| | |||||||||| ||||||||
Sbjct 687006 ATACATTTGCCAAATATCAGGCCATTGAATAGGAAAGACAACAAATCTACGTGGATTTT 687064
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712878559413120
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