Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19] 6,266 sequences; 272,660,569 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq305 102 8e-17 >seq305 Length=1407860 Score = 102 bits (112), Expect = 8e-17 Identities = 141/193 (73%), Gaps = 6/193 (3%) Strand=Plus/Plus Query 23338 AGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATTAGT 23397 || || ||||| |||||||| |||||||||||||| | | | | || || ||||| | | Sbjct 686052 AGTCTGTCTGCGACAAATTCGATATATTGACACATAAGTTTACAATTCATGCCTATCATT 686111 Query 23398 TTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATT 23457 | || || | ||||| ||| ||| || |||||| ||||||||||||| || | Sbjct 686112 TCAACAGGTAATGCATCTGTTAAAAATTCTTGTTCAATTTCCACAGCATCTTTAA-TAAT 686170 Query 23458 TGAACAATAACTTCTTCACTAGGTGGATATTTTA-AATA--CTTAAACAATAAACATGCA 23514 ||| ||||| ||| || || | || || |||| ||||||| |||||||||| Sbjct 686171 TGA--CGTAACTCGCTCAGAAGACGGCTTTTGTATAATATGTTTAAACATTAAACATGCA 686228 Query 23515 AAATCACAATGTA 23527 ||||||||||||| Sbjct 686229 AAATCACAATGTA 686241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521447154452400