Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19]
6,266 sequences; 272,660,569 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq305 102 8e-17
>seq305
Length=1407860
Score = 102 bits (112), Expect = 8e-17
Identities = 141/193 (73%), Gaps = 6/193 (3%)
Strand=Plus/Plus
Query 23338 AGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATTAGT 23397
|| || ||||| |||||||| |||||||||||||| | | | | || || ||||| | |
Sbjct 686052 AGTCTGTCTGCGACAAATTCGATATATTGACACATAAGTTTACAATTCATGCCTATCATT 686111
Query 23398 TTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATT 23457
| || || | ||||| ||| ||| || |||||| ||||||||||||| || |
Sbjct 686112 TCAACAGGTAATGCATCTGTTAAAAATTCTTGTTCAATTTCCACAGCATCTTTAA-TAAT 686170
Query 23458 TGAACAATAACTTCTTCACTAGGTGGATATTTTA-AATA--CTTAAACAATAAACATGCA 23514
||| ||||| ||| || || | || || |||| ||||||| ||||||||||
Sbjct 686171 TGA--CGTAACTCGCTCAGAAGACGGCTTTTGTATAATATGTTTAAACATTAAACATGCA 686228
Query 23515 AAATCACAATGTA 23527
|||||||||||||
Sbjct 686229 AAATCACAATGTA 686241
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521447154452400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |