Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megachile_20rotundata_20[refseq_20GCF_5F000220905.1_202011-07-19] 6,266 sequences; 272,660,569 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq202 134 2e-26 >seq202 Length=497029 Score = 134 bits (148), Expect = 2e-26 Identities = 158/214 (74%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 50308 TATTTACGACTaaaaaaaTGTTTTGGCGCGGAATAGCGGAAGAACTTTTATGGTTCCTCG 50367 |||| || || ||| || |||||||| | ||| ||| |||||| | |||||||| | Sbjct 857 TATTAACTACAAAACAAGTGTTTTGGAGGGGAGTAGTAGAAGAATTGTTATGGTTTATAA 916 Query 50368 ACGGATCTACAAATTCTTTAAAGTTATCGGAGAAGTCCGTTCGTATATGGGACGCTCACG 50427 | ||||| |||||| | | ||||||| |||||| |||| ||| ||||| || | Sbjct 917 AAGGATCCACAAATGCAAAAGAGTTATCAGAGAAGAATGTTCATATTTGGGATGCAAATA 976 Query 50428 GTTCCAGATCAAATTTAGATCGTTTAGGATTTAATTACAGAAACAAAGGAGATTTAGGAC 50487 |||| | || | ||||| || ||||||| | ||||| | |||||||| | |||| Sbjct 977 GTTCGCGTACATACCTAGATTCTTGTGGATTTACTGACAGAGAAGAAGGAGATCTGGGAC 1036 Query 50488 CTGTTTACGGTTTTCAATGGAGACATTTTGGAGC 50521 |||| || || |||||||||||||||| |||||| Sbjct 1037 CTGTATATGGATTTCAATGGAGACATTATGGAGC 1070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 667022951334960