Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq116385 147 2e-30 >seq116385 Length=1425 Score = 147 bits (162), Expect = 2e-30 Identities = 317/470 (67%), Gaps = 3/470 (1%) Strand=Plus/Minus Query 16956 ACATCA-GACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAA 17014 |||||| ||| || || || || || | ||| ||||| || ||||||||| || || Sbjct 594 ACATCATGACG-GCAAAGTCACAGTGGAGTCCTTCGTCCCTAGAGATAAGTTCATTGGAG 536 Query 17015 AATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCA 17074 || ||||| || |||||| || | ||||| ||||| || ||||||||||| || Sbjct 535 AAGGTCAAACCAGGCATCAAACCCCTCTTCTTCAACCAGAAGATCGCGGCGAAACTTCCG 476 Query 17075 GAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCT 17134 ||||| || || || |||| ||||| || || | || ||||| | || ||| | Sbjct 475 CTGAAGAAAATGCCTTCAACGGCAGCAAAAGCAATGATTCTCTCGGCAAAGGTGGCGGAT 416 Query 17135 TTGTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCT 17194 || | | |||||| | |||| || || || | ||| | ||| | | || Sbjct 415 TTACTGCCAATCCAAGACAATGCCCAGTCAGCCTTCTTCTTCACACAAGGTAGATTCTCG 356 Query 17195 ATGGCCTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGG 17254 | || || || | ||| |||||||| | ||| || || | ||||| | | Sbjct 355 ACAGCGTTGAAGAGGAAGTCTCTTTCCTGTGGATCGCGGATGTAAGAGTCGATTAAAATA 296 Query 17255 CTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCT 17314 ||||||||||| ||||| | ||||||||| || ||||| || || || || || || ||| Sbjct 295 CTGTACATTTCCGAGTGGACGTTCTCCATAGCAATCTGGAACCCATAGAAACAGCGAGCT 236 Query 17315 TCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCG 17374 || | || || |||||| | ||| |||||| | | ||||| || || ||||| ||| Sbjct 235 TCAGTAATCTGGACTTCCTGGGTGAAACGTTCCACCAAGTTTTCATTGACAATGCCATCG 176 Query 17375 CTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTCCGG 17424 |||||||| || ||||| | || |||||| | || || ||||| Sbjct 175 GAAGCGGCGAAGAAAGCCAAAACGTGGGAAATGAAGTGCTTCTC-TCCGG 127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 516760360407720