Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq116385 145 8e-30 >seq116385 Length=1425 Score = 145 bits (160), Expect = 8e-30 Identities = 298/443 (67%), Gaps = 0/443 (0%) Strand=Plus/Minus Query 16205 GCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCT 16264 || ||||| || || ||||||||||| || ||||||||| ||||| || || || || Sbjct 583 GCAAAGTCACAGTGGAGTCCTTCGTCCCTAGAGATAAGTTCATTGGAGAAGGTCAAACCA 524 Query 16265 GGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATA 16324 ||||| || | ||||| |||||||| ||||| || || || ||||| || Sbjct 523 GGCATCAAACCCCTCTTCTTCAACCAGAAGATCGCGGCGAAACTTCCGCTGAAGAAAATG 464 Query 16325 CCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATC 16384 || ||||| | |||||||| || | || || || | || || |||| | | |||| Sbjct 463 CCTTCAACGGCAGCAAAAGCAATGATTCTCTCGGCAAAGGTGGCGGATTTACTGCCAATC 404 Query 16385 CATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAAC 16444 || | | |||| || || || | || | |||| | | || | || || || Sbjct 403 CAAGACAATGCCCAGTCAGCCTTCTTCTTCACACAAGGTAGATTCTCGACAGCGTTGAAG 344 Query 16445 AATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACATTTCT 16504 | ||| ||||||| |||| || || | || || | | |||||||||||| Sbjct 343 AGGAAGTCTCTTTCCTGTGGATCGCGGATGTAAGAGTCGATTAAAATACTGTACATTTCC 284 Query 16505 GAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGT 16564 ||||| | |||||| || || ||||| || |||||||| || ||||| || | || || Sbjct 283 GAGTGGACGTTCTCCATAGCAATCTGGAACCCATAGAAACAGCGAGCTTCAGTAATCTGG 224 Query 16565 ACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAA 16624 |||||| | || |||||| ||| ||| ||||| || || || || || || || Sbjct 223 ACTTCCTGGGTGAAACGTTCCACCAAGTTTTCATTGACAATGCCATCGGAAGCGGCGAAG 164 Query 16625 AACGCCAATATGTGCTTAATGAA 16647 || ||||| | ||| |||||| Sbjct 163 AAAGCCAAAACGTGGGAAATGAA 141 Score = 105 bits (116), Expect = 7e-18 Identities = 225/331 (68%), Gaps = 4/331 (1%) Strand=Plus/Minus Query 16017 CCAGTTCCGTAACTAATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAAT 16076 ||| |||||| | | ||||| || |||||||| || || || |||| | ||| || | Sbjct 938 CCAATTCCGTTAGAAGCCTATCAGCCACAAATTCAATGTACTGGGACATGAGGTCACAGT 879 Query 16077 TAATTCCTATAAGTCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCG 16136 | || || || || || || || ||||| || || |||| |||||| || ||| | Sbjct 878 TCATGCCGATGAGGTTGACGGGCAGGGCTTTAGTCAAGAATTCTTGTTCAATTTTAACAG 819 Query 16137 CTTCTTTAATGATATCGGTGGCTCGTGTT-TCAGACGGTGTATGGTTTAGGTGTTTAAAC 16195 | || ||||| ||| | || ||| | || || | ||| | ||| | || Sbjct 818 CATCGAGGATGATTTCGCGGATTC-TGTCCTTGGATGGCCTTTGGACCAAGTGATGGTAC 760 Query 16196 ATTA-GACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAA 16254 || | ||| || ||||| || || ||||||||||| || ||||||||| ||||| || Sbjct 759 ATCATGACG-GCAAAGTCACAGTGGAGTCCTTCGTCCCTAGAGATAAGTTCATTGGAGAA 701 Query 16255 AGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGA 16314 || || || ||||| || | ||||| |||||||| ||||| || || || Sbjct 700 GGTCAAACCAGGCATCAAACCCCTCTTCTTCAACCAGAAGATCGCGGCGAAACTTCCGCT 641 Query 16315 AAAGAATATACCCTCAACAGATGCAAAAGCG 16345 ||||| || || ||||||| ||||||||| Sbjct 640 GAAGAAAATGCCTTCAACAGCGGCAAAAGCG 610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 510638462894280