Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq27445 163 2e-35 >seq27445 Length=3274 Score = 163 bits (180), Expect = 2e-35 Identities = 404/605 (67%), Gaps = 6/605 (1%) Strand=Plus/Minus Query 101702 TAGATGTGAGCATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGA 101761 ||||| |||| |||||| ||| |||| | ||| || |||| | | | |||||| Sbjct 2894 TAGATATGAGTATCTCCAATATTATGAACAAAGTCGCCAGTTTTCAAACCACAAACATGA 2835 Query 101762 GCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATA 101821 ||||||||| | || || | | ||| || ||||| || ||||||||||| | || ||| Sbjct 2834 GCAATCATGTATGTCAATAAGGCATAACTGGCAATATTGAATGGCACTCCAAGACCAATA 2775 Query 101822 TCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAAAATTGACTT 101881 || | | | ||||| ||| ||| || | || ||| ||| | ||||| Sbjct 2774 TCCCCAGCACGCTGATAAAGTGAACAAGACAACTCGTTATCCTCCACAAAGAATTGGACG 2715 Query 101882 AATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCAAGCACACATT 101941 || |||||| ||||| || ||||||| ||||| || | |||||| | |||| Sbjct 2714 AAGCAATGACATGGCGGTAAAGCCATTTTTGGAATATCCACAGGATTCCAGGACGACATG 2655 Query 101942 AACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAACTGTTTTAA-TTGGTC 102000 | || |||| || || || || |||||||||| | ||| ||| |||||| || || Sbjct 2654 CAGATTCTTCGGTCGGTTGGATTATTTTTTATAGTGTTAAT-AACATTTTTAAGCTGATC 2596 Query 102001 AACTCCTTCTCCTTTATAATCGCGCCCAACA-CCTTTATATTCTGCTCCGAAATGCCTCC 102059 ||||||| || ||||||| | || ||| || || ||||| |||| | || Sbjct 2595 CACTCCTTGACCCATATAATC-ATCATGGCATGTTTTGTACTCAGCTCCAAAATAACGCC 2537 Query 102060 ACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAAAAACCAAGTTTAT 102119 ||||||| ||||| || || || || || ||||| ||||| ||| || || || | Sbjct 2536 ACTGAAAACCATAAACCGGACCTAGGTCACCTTCTTCTCTATCAGTTAATCCGCACTTGT 2477 Query 102120 CTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCA-CGCCAGCTGCTGATAGCTCT 102178 ||| ||| ||| | | || | |||||||| | | | || | ||| Sbjct 2476 CTAGAAACTCTCTTGTGCTGTTTCCTTCCCAAATTTTAATATTTTTTTCCTTCAGGATCT 2417 Query 102179 TTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAACACCTCTCCAAAAT 102238 ||| |||||| |||| | | |||||||| || ||||| | ||| |||||||||| Sbjct 2416 TTG-AGTCAGTTTGTCCTTTAACGAACCACAAGAGCTCTTCCGCCACAGCTCTCCAAAAA 2358 Query 102239 ACTCTCTTAGTAGTTAAAAGTGGAAATTCATTTTCTAAACTAAACCTAGACTGTGTTCCA 102298 ||| |||| || ||||| | ||||| | |||| || | ||||||| || ||||| Sbjct 2357 ACTTTCTTTGTGGTTAACAAAGGAAACTGATTTCTTAGATTAAACCTCATATGACTTCCA 2298 Query 102299 AAAAT 102303 ||||| Sbjct 2297 AAAAT 2293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 360716798729129